Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G4002 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.0e-48 196.4 101 100.0
FvH4_3g14361 Fragaria vesca HOM05D000539 ORTHO05D000233 9.0e-37 156.8 124 71.8
FvH4_7g02602 Fragaria vesca HOM05D000539 ORTHO05D000233 9.0e-37 156.8 124 71.8
FvH4_5g19271 Fragaria vesca HOM05D000539 ORTHO05D000233 2.0e-36 155.6 124 71.0
FAN24G3557 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.9e-36 154.1 124 71.0
FAN11G1109 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.7e-35 152.5 124 70.2
FAN06G1168 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.2e-35 152.1 124 70.2
FAN14G5321 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.4e-35 150.2 124 69.4
FvH4_4g16176 Fragaria vesca HOM05D000539 ORTHO05D000233 7.2e-34 147.1 125 69.6
FAN21G0704 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.9e-33 143.7 124 66.9
FAN04G3167 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.3e-31 137.9 123 66.7
FAN09G3363 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.7e-31 137.5 81 87.7
FAN07G2711 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-27 126.3 95 72.6
FAN22G2232 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.2e-27 125.6 98 74.5
FAN03G1033 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.2e-26 121.7 124 58.1
FAN16G1830 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.2e-26 121.7 124 58.1
FAN10G1391 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.1e-24 114.4 67 85.1
RcHm_v2.0_Chr4g0391901 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-21 106.3 94 62.8
FvH4_2g18191 Fragaria vesca HOM05D000539 ORTHO05D000233 1.8e-21 105.9 72 77.8
FvH4_6g23071 Fragaria vesca HOM05D000539 ORTHO05D000233 5.9e-20 100.9 94 63.8
FAN27G3263 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.5e-19 97.4 61 83.6
FvH4_7g02152 Fragaria vesca HOM05D000539 ORTHO05D000233 6.1e-17 90.9 124 51.6
RcHm_v2.0_Chr1g0342101 Rosa chinensis HOM05D000539 ORTHO05D000233 3.0e-16 88.6 67 68.7
RcHm_v2.0_Chr7g0228371 Rosa chinensis HOM05D000539 ORTHO05D000233 3.0e-16 88.6 67 68.7
FAN01G2580 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-15 86.7 87 60.9
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 3.5e-12 75.1 95 48.4
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 4.5e-12 74.7 82 48.8
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 4.5e-12 74.7 82 48.8
FvH4_5g20921 Fragaria vesca HOM05D000539 ORTHO05D000233 1.3e-11 73.2 63 57.1
RcHm_v2.0_Chr3g0481681 Rosa chinensis HOM05D000539 ORTHO05D000233 2.2e-11 72.4 82 47.6
FvH4_3g26442 Fragaria vesca HOM05D000539 ORTHO05D000233 2.9e-11 72.0 63 55.6
RcHm_v2.0_Chr3g0462471 Rosa chinensis HOM05D000539 ORTHO05D000233 1.5e-10 69.7 81 46.9
RcHm_v2.0_Chr4g0414231 Rosa chinensis HOM05D000539 ORTHO05D000233 1.9e-10 69.3 69 50.7
FAN18G1469 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.5e-10 68.9 63 54.0
FAN01G1775 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.2e-10 68.6 36 91.7
RcHm_v2.0_Chr5g0082411 Rosa chinensis HOM05D000539 ORTHO05D000233 4.2e-10 68.2 81 45.7
RcHm_v2.0_Chr6g0267111 Rosa chinensis HOM05D000539 ORTHO05D000233 3.6e-09 65.1 84 44.0
DCAR_031676 Daucus carota HOM05D000539 ORTHO05D000233 1.0e-08 63.5 88 45.5
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-08 62.4 86 51.2
FvH4_3g30982 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-07 60.1 64 50.0
FAN02G2878 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-07 60.1 64 50.0
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-07 60.1 64 50.0
RcHm_v2.0_Chr2g0095191 Rosa chinensis HOM05D000107 ORTHO05D000062 1.1e-07 60.1 83 45.8
FAN07G1632 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-07 59.7 30 93.3
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 1.5e-07 59.7 63 52.4
RcHm_v2.0_Chr2g0102081 Rosa chinensis HOM05D000539 ORTHO05D000233 2.0e-07 59.3 98 39.8
RcHm_v2.0_Chr2g0123111 Rosa chinensis HOM05D000539 ORTHO05D000233 2.0e-07 59.3 54 55.6
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 2.0e-07 59.3 83 45.8
RcHm_v2.0_Chr5g0045841 Rosa chinensis HOM05D000539 ORTHO05D000233 2.0e-07 59.3 63 50.8
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 2.6e-07 58.9 83 45.8
RcHm_v2.0_Chr5g0072981 Rosa chinensis HOM05D000539 ORTHO05D000233 3.3e-07 58.5 92 45.7
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 3.3e-07 58.5 63 50.8
FAN25G3386 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.4e-07 58.2 36 83.3
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.7e-07 57.8 80 38.8
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.7e-07 57.8 80 38.8
FAN26G0195 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.7e-07 57.8 70 44.3
RcHm_v2.0_Chr1g0340601 Rosa chinensis HOM05D000539 ORTHO05D000233 5.7e-07 57.8 85 45.9
RcHm_v2.0_Chr4g0395761 Rosa chinensis HOM05D000539 ORTHO05D000233 5.7e-07 57.8 63 50.8
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 7.5e-07 57.4 79 43.0
FvH4_3g31624 Fragaria vesca HOM05D000539 ORTHO05D000592 9.7e-07 57.0 63 47.6
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 9.7e-07 57.0 64 48.4
FvH4_7g09681 Fragaria vesca HOM05D000539 ORTHO05D000233 1.7e-06 56.2 64 48.4
FAN13G3216 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.7e-06 56.2 79 38.0
FAN28G1622 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.7e-06 56.2 79 38.0
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 1.7e-06 56.2 52 51.9
FAN19G0390 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.2e-06 55.8 64 45.3
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 2.8e-06 55.5 71 39.4
FvH4_1g25001 Fragaria vesca HOM05D000539 ORTHO05D000233 2.8e-06 55.5 63 49.2
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.2e-06 53.9 79 36.7


User provided reference genes

Program Settings