Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 4.2e-220 767.7 379 100.0
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.9e-202 708.0 381 92.7
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.4e-199 699.5 374 93.0
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 3.1e-199 698.4 372 93.3
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 1.5e-188 662.9 377 87.0
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 7.0e-159 564.3 379 75.7
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 1.4e-151 540.0 377 70.8
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 1.6e-150 536.6 355 73.5
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 4.6e-150 535.0 371 71.7
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 2.3e-149 532.7 377 69.8
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 2.4e-146 522.7 377 66.3
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 2.4e-146 522.7 377 66.6
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 6.8e-146 521.2 377 66.3
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.7e-144 516.5 376 68.1
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 2.9e-144 515.8 367 67.3
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 3.8e-144 515.4 382 68.3
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 5.4e-143 511.5 373 68.1
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 1.0e-141 507.3 356 70.8
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 3.9e-141 505.4 373 66.5
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 4.3e-140 501.9 375 66.4
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 5.6e-140 501.5 377 66.8
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 1.2e-139 500.4 342 69.3
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 2.1e-139 499.6 361 68.4
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 3.6e-139 498.8 340 69.4
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 6.2e-139 498.0 346 70.5
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 2.0e-137 493.0 363 67.8
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 3.4e-137 492.3 407 62.7
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 3.4e-137 492.3 380 64.2
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 4.4e-137 491.9 369 65.3
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 3.8e-136 488.8 363 64.7
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 4.9e-136 488.4 375 65.3
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 8.4e-136 487.6 372 66.9
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 8.4e-136 487.6 370 64.9
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 1.1e-135 487.3 369 66.1
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 3.2e-135 485.7 365 66.8
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 7.1e-135 484.6 370 65.4
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 9.3e-135 484.2 339 68.7
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 2.7e-134 482.6 359 66.0
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 7.8e-134 481.1 381 63.3
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 3.0e-133 479.2 373 63.0
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 1.5e-132 476.9 355 65.6
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 1.5e-132 476.9 362 64.1
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 1.9e-132 476.5 373 62.7
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 2.5e-132 476.1 366 63.4
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 4.3e-132 475.3 377 62.1
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 9.6e-132 474.2 382 63.1
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 2.1e-131 473.0 392 61.7
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 2.8e-131 472.6 408 58.3
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 4.8e-131 471.9 363 64.2
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 6.2e-131 471.5 375 65.6
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 1.4e-130 470.3 364 63.7
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 3.1e-130 469.2 346 65.6
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 5.3e-130 468.4 372 61.8
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 9.0e-130 467.6 350 64.9
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 4.9e-128 461.8 365 62.7
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 8.4e-128 461.1 362 61.9
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 3.2e-127 459.1 364 62.9
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 9.3e-127 457.6 365 62.7
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 1.2e-126 457.2 365 62.7
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 4.6e-126 455.3 363 63.4
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 4.6e-126 455.3 365 61.9
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 4.6e-126 455.3 365 61.9
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 6.0e-126 454.9 366 62.3
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 3.0e-125 452.6 365 61.1
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 3.3e-124 449.1 360 61.7
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 3.3e-124 449.1 344 64.0
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 5.6e-124 448.4 350 62.9
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 2.8e-123 446.0 351 61.5
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 2.8e-123 446.0 363 61.4
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 8.1e-123 444.5 378 59.3
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 9.0e-122 441.0 341 62.8
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 1.5e-121 440.3 380 60.8
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 1.5e-121 440.3 371 60.9
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 3.8e-120 435.6 436 53.7
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 2.1e-118 429.9 307 68.4
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 3.9e-117 425.6 349 58.2
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 3.9e-117 425.6 367 59.9
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.3e-115 420.6 359 60.2
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.2e-113 414.1 341 61.9
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 1.5e-113 413.7 341 61.9
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 4.5e-113 412.1 375 54.9
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.9e-112 409.5 374 54.8
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 9.3e-111 404.4 344 59.6
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 5.1e-109 398.7 515 46.4
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 7.4e-108 394.8 318 62.6
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 1.4e-106 390.6 342 56.1
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 9.0e-106 387.9 287 63.8
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 6.5e-104 381.7 279 68.5
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 8.5e-104 381.3 276 65.2
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 3.6e-102 375.9 256 67.6
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 3.2e-95 352.8 356 53.9
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 3.6e-94 349.4 268 65.3
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 8.8e-93 344.7 323 55.1
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.7e-88 330.5 358 53.4
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 1.5e-84 317.4 336 47.9
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 7.7e-81 305.1 342 45.9
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 5.7e-76 288.9 260 53.5
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 2.2e-75 287.0 397 43.8
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 2.9e-72 276.6 180 69.4
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 1.7e-67 260.8 347 42.7
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 4.7e-62 242.7 207 56.5
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 1.6e-54 217.6 365 37.0
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.1e-34 151.8 103 71.8
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 6.6e-32 142.5 178 44.9
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.3e-31 140.2 78 79.5
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.2e-25 121.7 101 63.4
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.9e-19 99.8 73 72.6
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 1.5e-15 88.2 97 47.4
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.6e-15 86.3 60 70.0
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 4.0e-13 80.1 55 76.4
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 6.4e-11 72.8 74 52.7
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 3.5e-09 67.0 52 63.5
Rhsim06G0143300 Rhododendron simsii HOM05D006713 ORTHO05D338742 2.8e-06 57.4 42 71.4
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 2.8e-06 57.4 47 51.1


User provided reference genes

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