Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3878 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.2e-168 595.5 295 100.0
FAN14G5443 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.6e-137 492.3 307 85.3
FAN05G4853 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.5e-135 485.7 263 93.5
FAN15G0940 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.2e-78 297.4 302 57.6
FvH4_6g24450 Fragaria vesca HOM05D008179 ORTHO05D009362 3.6e-78 295.8 303 59.1
RcHm_v2.0_Chr5g0019881 Rosa chinensis HOM05D008179 ORTHO05D009362 3.6e-70 269.2 304 52.3
RcHm_v2.0_Chr5g0021181 Rosa chinensis HOM05D008179 ORTHO05D009362 1.4e-69 267.3 301 52.8
FvH4_2g03910 Fragaria vesca HOM05D008179 ORTHO05D009362 5.3e-69 265.4 223 62.3
FAN22G0489 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.3e-59 234.2 210 61.0
Prupe.4G112200 Prunus persica HOM05D008179 ORTHO05D009362 1.4e-50 204.1 280 42.9
FAN25G2419 Fragaria x ananassa HOM05D008179 ORTHO05D009362 4.2e-50 202.6 278 44.6
Prupe.4G219900 Prunus persica HOM05D008179 ORTHO05D009362 6.1e-41 172.2 289 40.5
FvH4_4g13750 Fragaria vesca HOM05D008179 ORTHO05D009362 3.7e-38 162.9 208 47.6
FAN07G0173 Fragaria x ananassa HOM05D008179 ORTHO05D009362 6.3e-38 162.2 136 61.8
Prupe.4G220100 Prunus persica HOM05D008179 ORTHO05D009362 1.8e-37 160.6 312 38.5
Prupe.4G130000 Prunus persica HOM05D008179 ORTHO05D009362 2.4e-37 160.2 286 39.5
RcHm_v2.0_Chr3g0479021 Rosa chinensis HOM05D008179 ORTHO05D009362 1.2e-36 157.9 287 41.1
MD05G1336000 Malus domestica HOM05D008179 ORTHO05D009362 1.0e-35 154.8 277 37.9
RcHm_v2.0_Chr3g0478691 Rosa chinensis HOM05D008179 ORTHO05D009362 1.7e-35 154.1 285 37.9
MD05G1336100 Malus domestica HOM05D008179 ORTHO05D009362 5.0e-35 152.5 269 37.5
FAN05G1237 Fragaria x ananassa HOM05D008179 ORTHO05D009362 6.5e-35 152.1 266 39.5
Prupe.4G130300 Prunus persica HOM05D008179 ORTHO05D009362 3.2e-34 149.8 209 43.1
FAN20G2427 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.2e-33 147.9 113 65.5
Prupe.4G219800 Prunus persica HOM05D008179 ORTHO05D009362 1.6e-33 147.5 281 37.0
FAN27G1833 Fragaria x ananassa HOM05D008179 ORTHO05D009362 3.6e-33 146.4 146 55.5
MD10G1311600 Malus domestica HOM05D008179 ORTHO05D009362 4.7e-33 146.0 268 38.1
FAN16G0437 Fragaria x ananassa HOM05D008179 ORTHO05D009362 2.0e-31 140.6 148 50.7
FAN14G0841 Fragaria x ananassa HOM05D008179 ORTHO05D009362 8.2e-30 135.2 211 41.2
FvH4_6g21740 Fragaria vesca HOM05D008179 ORTHO05D009362 5.3e-29 132.5 211 40.8
FAN12G0136 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.0e-27 128.3 95 67.4
Dinv18943 Davidia involucrata HOM05D008179 ORTHO05D009362 3.8e-27 126.3 251 37.5
RcHm_v2.0_Chr5g0004511 Rosa chinensis HOM05D008179 ORTHO05D009362 4.2e-26 122.9 261 36.4
MD10G1212400 Malus domestica HOM05D008179 ORTHO05D009362 2.1e-25 120.6 294 33.3
TAR624G0619 Trochodendron aralioides HOM05D008179 ORTHO05D009362 5.2e-24 115.9 278 30.2
FAN14G4501 Fragaria x ananassa HOM05D008179 ORTHO05D009362 1.1e-23 114.8 253 34.8
QL93p0073_1249 Quercus lobata HOM05D008179 ORTHO05D009362 4.4e-23 112.8 303 29.0
FvH4_6g21492 Fragaria vesca HOM05D008179 ORTHO05D009362 2.0e-20 104.0 180 36.1
FAN14G4642 Fragaria x ananassa HOM05D008179 ORTHO05D009362 5.9e-20 102.4 116 48.3
Lj1C1222T5 Lonicera japonica HOM05D008179 ORTHO05D009362 6.5e-19 99.0 279 28.0
Lj1C1222G5 Lonicera japonica HOM05D008179 ORTHO05D009362 8.5e-19 98.6 218 32.1
Hma1.2p1_1682F.1_g297290 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 1.5e-18 97.8 193 35.2
FAN27G1228 Fragaria x ananassa HOM05D008179 ORTHO05D009362 4.2e-18 96.3 116 54.3
DCAR_008110 Daucus carota HOM05D008179 ORTHO05D009362 1.2e-17 94.7 252 31.7
Hma1.2p1_1682F.1_g297310 Hydrangea macrophylla HOM05D008179 ORTHO05D009362 3.6e-17 93.2 260 31.9
Manes.04G017300 Manihot esculenta HOM05D008179 ORTHO05D009362 3.6e-17 93.2 275 29.5
Manes.04G017200 Manihot esculenta HOM05D008179 ORTHO05D009362 6.1e-17 92.4 276 30.4
QL05p077156 Quercus lobata HOM05D008179 ORTHO05D009362 1.4e-16 91.3 278 27.0
SalBow8G3222 Salvia bowleyana HOM05D008179 ORTHO05D009362 9.7e-15 85.1 263 27.8
DCAR_008111 Daucus carota HOM05D008179 ORTHO05D009362 6.3e-14 82.4 227 29.5
DCAR_008113 Daucus carota HOM05D008179 ORTHO05D009362 5.3e-13 79.3 200 28.5
Dinv18942 Davidia involucrata HOM05D008179 ORTHO05D009362 5.3e-13 79.3 193 31.1
DCAR_028233 Daucus carota HOM05D008179 ORTHO05D009362 1.6e-12 77.8 223 26.0
Dinv17850 Davidia involucrata HOM05D008179 ORTHO05D009362 1.6e-12 77.8 140 33.6
Manes.11G148800 Manihot esculenta HOM05D008179 ORTHO05D009362 1.9e-10 70.9 266 26.3
Prupe.4G112100 Prunus persica HOM05D000475 ORTHO05D000343 2.5e-10 70.5 69 52.2
Oeu062972.1 Olea europaea HOM05D008179 ORTHO05D009362 5.5e-10 69.3 263 27.8
Peaxi162Scf00263g00093 Petunia axillaris HOM05D009034 ORTHO05D009362 3.6e-09 66.6 281 21.7
Nitab4.5_0011228g0010 Nicotiana tabacum HOM05D009034 ORTHO05D009362 6.8e-08 62.4 271 23.6
Nitab4.5_0000308g0340 Nicotiana tabacum HOM05D009034 ORTHO05D009362 2.6e-07 60.5 106 34.0
SalBow6G4060 Salvia bowleyana HOM05D008179 ORTHO05D009362 5.7e-07 59.3 127 29.9
Nitab4.5_0009524g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 9.8e-07 58.5 196 26.0
Nitab4.5_0010389g0020 Nicotiana tabacum HOM05D009034 ORTHO05D009362 8.3e-06 55.5 126 28.6


User provided reference genes

Program Settings