Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.2e-235 818.5 407 100.0
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 8.8e-224 780.0 407 96.6
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 3.3e-223 778.1 407 96.1
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 4.4e-223 777.7 407 96.3
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 8.2e-222 773.5 407 95.6
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 8.2e-214 746.9 407 91.6
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 8.8e-200 700.3 407 83.8
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 1.0e-195 686.8 408 83.1
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 8.3e-190 667.2 405 79.3
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 4.7e-185 651.4 407 75.7
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 3.0e-184 648.7 407 75.4
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 4.0e-184 648.3 407 76.4
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 9.8e-183 643.7 407 75.4
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 4.9e-182 641.3 407 74.0
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 6.4e-182 641.0 407 74.4
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 6.4e-182 641.0 407 74.7
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 8.3e-182 640.6 407 75.9
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 8.3e-182 640.6 407 75.7
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 1.9e-181 639.4 407 74.7
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 1.9e-181 639.4 405 74.6
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 2.4e-181 639.0 407 75.7
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 3.2e-181 638.6 407 74.2
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 7.0e-181 637.5 407 75.2
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 9.2e-181 637.1 407 73.7
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 1.6e-180 636.3 405 75.8
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 2.7e-180 635.6 391 76.0
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 2.7e-180 635.6 416 74.3
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 2.7e-180 635.6 406 76.4
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 4.6e-180 634.8 407 73.7
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 1.7e-179 632.9 407 74.9
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 3.0e-179 632.1 408 74.5
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 3.0e-179 632.1 405 75.8
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 3.0e-179 632.1 407 74.9
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 5.0e-179 631.3 407 74.2
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 6.6e-179 630.9 407 74.2
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 8.6e-179 630.6 405 75.1
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 1.5e-178 629.8 407 74.9
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 1.5e-178 629.8 406 74.9
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 2.5e-178 629.0 406 75.1
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 3.3e-178 628.6 405 73.1
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 3.3e-178 628.6 405 73.3
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 5.6e-178 627.9 405 73.1
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 5.6e-178 627.9 407 74.7
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 9.5e-178 627.1 407 74.7
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 9.5e-178 627.1 407 74.7
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 9.5e-178 627.1 405 74.3
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 9.5e-178 627.1 405 72.1
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 1.2e-177 626.7 407 74.4
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 1.2e-177 626.7 407 74.4
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 2.1e-177 625.9 407 74.9
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 2.8e-177 625.5 434 70.7
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 6.2e-177 624.4 408 73.5
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 8.0e-177 624.0 407 74.4
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 1.4e-176 623.2 407 74.7
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 1.4e-176 623.2 407 71.5
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 1.8e-176 622.9 407 74.4
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 1.8e-176 622.9 407 74.2
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 2.3e-176 622.5 405 73.8
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 2.3e-176 622.5 405 72.6
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 3.1e-176 622.1 407 74.4
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 5.2e-176 621.3 405 72.1
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 1.5e-175 619.8 405 72.1
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 1.5e-175 619.8 405 72.1
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 3.4e-175 618.6 405 72.3
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 3.4e-175 618.6 405 71.9
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 3.7e-174 615.1 398 72.6
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 4.9e-174 614.8 407 71.5
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 4.9e-174 614.8 407 72.5
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 8.3e-174 614.0 407 72.7
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 8.3e-174 614.0 406 71.7
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 1.1e-173 613.6 407 72.2
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 1.9e-173 612.8 404 73.8
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 1.9e-173 612.8 407 72.2
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 6.0e-172 607.8 422 69.9
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 5.0e-171 604.7 407 70.0
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 8.6e-171 604.0 408 70.6
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 4.3e-170 601.7 450 66.2
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 2.1e-169 599.4 408 70.1
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 8.1e-169 597.4 407 69.0
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 1.8e-168 596.3 407 69.0
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 5.2e-168 594.7 407 69.8
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 7.5e-167 590.9 403 68.5
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 1.7e-163 579.7 404 69.3
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 4.3e-162 575.1 407 67.8
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 4.6e-156 555.1 342 74.9
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 1.9e-154 549.7 313 80.8
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 8.4e-150 534.3 403 63.3
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 1.9e-149 533.1 400 64.0
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 7.8e-148 527.7 400 64.0
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.1e-141 507.3 316 75.6
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 3.5e-140 502.3 335 74.3
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 3.7e-129 465.7 407 59.5
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 7.6e-127 458.0 276 76.4
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 7.2e-117 424.9 399 56.1
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 2.1e-116 423.3 396 54.0
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 2.4e-112 409.8 394 51.0
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.0e-110 404.4 394 51.0
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 1.4e-109 400.6 398 50.5
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 5.3e-104 382.1 397 49.9
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 1.1e-88 331.3 397 43.1
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 7.0e-64 248.8 187 65.2
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 4.6e-63 246.1 207 58.5
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 4.6e-63 246.1 207 58.5
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 1.2e-60 238.0 130 79.2
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.6e-44 184.5 128 64.8
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.9e-24 117.9 80 71.2
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 4.8e-20 103.2 62 75.8


User provided reference genes

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