Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.5e-303 1045.4 556 100.0
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 9.6e-298 1026.2 556 98.4
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 9.9e-295 1016.1 556 97.1
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.2e-293 1010.7 556 97.1
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.0e-291 1004.6 571 94.4
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.8e-287 990.3 556 95.7
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 3.3e-282 974.5 560 92.9
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 3.2e-261 904.8 557 85.8
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 3.1e-232 808.5 571 76.4
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.7e-230 802.7 570 76.1
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 2.3e-230 802.4 555 78.9
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 5.0e-230 801.2 558 77.6
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 1.5e-229 799.7 571 75.7
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 2.1e-228 795.8 571 75.0
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 8.0e-228 793.9 571 75.5
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 5.2e-227 791.2 553 77.6
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 6.8e-227 790.8 571 75.3
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 8.9e-227 790.4 566 75.6
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.4e-226 788.5 567 75.3
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 5.7e-226 787.7 562 76.3
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 1.3e-225 786.6 566 75.1
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.1e-224 783.5 566 75.6
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.4e-224 783.1 571 74.6
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.2e-223 780.0 558 74.9
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 5.9e-223 777.7 568 74.8
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 2.3e-222 775.8 572 74.5
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 2.3e-222 775.8 566 73.1
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 6.6e-222 774.2 565 74.0
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 2.5e-221 772.3 567 74.1
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.2e-220 770.0 576 72.7
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.2e-220 770.0 565 73.6
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 8.0e-220 767.3 562 72.8
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 3.1e-219 765.4 568 73.1
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 4.0e-219 765.0 559 73.5
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 4.0e-219 765.0 563 73.4
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 5.2e-219 764.6 560 73.0
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 2.6e-218 762.3 560 72.9
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 8.3e-217 757.3 573 72.6
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 5.4e-216 754.6 572 73.1
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 9.2e-216 753.8 565 73.5
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.0e-215 752.7 560 71.2
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 5.0e-214 748.0 567 71.1
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 4.3e-213 745.0 595 69.4
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 8.1e-212 740.7 568 70.8
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 3.1e-211 738.8 558 72.0
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 6.8e-211 737.6 567 72.5
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 4.4e-210 734.9 562 72.1
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 5.8e-210 734.6 634 64.7
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.3e-209 733.4 573 70.2
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.1e-208 730.3 560 70.9
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.2e-207 726.9 564 71.8
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.6e-207 726.5 563 69.8
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 4.6e-207 724.9 565 69.2
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 2.3e-206 722.6 567 69.1
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 8.6e-206 720.7 564 70.2
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.1e-205 720.3 568 68.1
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 1.5e-205 719.9 557 68.4
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.1e-204 716.1 563 68.7
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 8.1e-204 714.1 558 68.3
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.8e-203 713.0 558 67.7
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 3.1e-203 712.2 571 68.5
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 5.2e-203 711.4 557 67.9
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 5.2e-203 711.4 568 68.0
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.5e-202 709.9 586 65.5
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 5.8e-202 708.0 557 67.7
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.3e-201 706.8 557 67.7
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 3.8e-201 705.3 558 67.6
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 2.4e-200 702.6 568 68.7
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.0e-198 697.2 558 68.3
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.7e-198 696.4 557 67.0
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.6e-196 689.9 553 68.4
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 4.7e-196 688.3 560 66.8
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.1e-195 687.2 560 68.2
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.5e-194 683.3 560 65.5
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 3.4e-194 682.2 568 67.3
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 7.6e-194 681.0 565 65.1
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 2.4e-192 676.0 570 64.9
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 3.6e-188 662.1 529 70.5
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.7e-185 653.3 559 66.4
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.9e-185 652.5 557 64.1
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 2.9e-185 652.5 557 63.9
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.9e-185 652.5 557 64.1
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 2.9e-185 652.5 557 63.9
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 8.4e-185 651.0 557 63.9
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.9e-184 649.8 563 64.5
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.8e-177 625.5 568 61.3
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 6.4e-177 624.8 524 64.9
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 2.1e-175 619.8 564 61.5
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 1.8e-174 616.7 561 60.4
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.3e-172 610.5 505 66.9
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 2.8e-172 609.4 564 59.4
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 3.1e-171 605.9 574 57.5
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 4.5e-170 602.1 481 67.8
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 8.7e-166 587.8 634 55.0
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 4.5e-162 575.5 513 63.4
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 4.7e-143 512.3 403 68.0
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 3.1e-123 446.4 449 60.1
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 3.8e-121 439.5 402 63.7
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 6.1e-119 432.2 571 43.6
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.2e-114 417.9 553 44.7
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 3.3e-112 409.8 224 90.2
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 2.0e-106 390.6 249 85.9
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.8e-102 377.5 586 40.4
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 5.8e-101 372.5 301 70.8
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.0e-97 361.7 225 80.9
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 3.4e-93 346.7 297 66.0
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 2.9e-92 343.6 601 36.9
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 3.2e-91 340.1 561 38.1
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 5.3e-70 269.6 196 70.4
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 9.3e-67 258.8 174 70.1
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 5.8e-61 239.6 364 47.3
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 7.4e-56 222.6 151 77.5
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.5e-51 207.6 175 65.7
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 3.0e-49 200.7 584 28.1
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 4.3e-48 196.8 157 74.5
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.5e-35 154.5 71 100.0
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 6.7e-33 146.4 148 56.1
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 4.8e-15 87.0 54 85.2
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 8.8e-09 66.2 44 68.2
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 9.8e-08 62.8 64 56.2
RcHm_v2.0_Chr3g0480231 Rosa chinensis HOM05D006621 ORTHO05D043305 6.3e-07 60.1 41 80.5


User provided reference genes

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