Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3694 Fragaria x ananassa HOM05D000030 ORTHO05D000031 2.5e-81 305.8 213 100.0
RcHm_v2.0_Chr3g0467291 Rosa chinensis HOM05D000030 ORTHO05D000009 4.9e-24 115.5 64 81.2
RcHm_v2.0_Chr2g0170381 Rosa chinensis HOM05D000030 ORTHO05D000009 2.3e-18 96.7 65 70.8
FvH4_1g11501 Fragaria vesca HOM05D000030 ORTHO05D000031 5.2e-18 95.5 65 69.2
RcHm_v2.0_Chr7g0202411 Rosa chinensis HOM05D000030 ORTHO05D000031 5.2e-18 95.5 64 65.6
FvH4_5g32331 Fragaria vesca HOM05D000030 ORTHO05D000031 1.2e-17 94.4 65 67.7
FvH4_4g15672 Fragaria vesca HOM05D000030 ORTHO05D000031 1.7e-16 90.5 65 64.6
FvH4_4g08801 Fragaria vesca HOM05D000030 ORTHO05D000031 6.4e-16 88.6 69 62.3
FvH4_3g04271 Fragaria vesca HOM05D000030 ORTHO05D000031 1.4e-15 87.4 91 52.7
RcHm_v2.0_Chr5g0016281 Rosa chinensis HOM05D000030 ORTHO05D000009 5.6e-12 75.5 71 49.3
RcHm_v2.0_Chr7g0242101 Rosa chinensis HOM05D000030 ORTHO05D000031 1.1e-10 71.2 71 47.9
RcHm_v2.0_Chr3g0496341 Rosa chinensis HOM05D000030 ORTHO05D000031 1.8e-10 70.5 66 50.0
RcHm_v2.0_Chr4g0423601 Rosa chinensis HOM05D000030 ORTHO05D000031 4.0e-10 69.3 71 46.5
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 4.0e-10 69.3 70 48.6
FvH4_2g26901 Fragaria vesca HOM05D000030 ORTHO05D000031 1.7e-08 63.9 66 43.9
RcHm_v2.0_Chr4g0396801 Rosa chinensis HOM05D000030 ORTHO05D000031 3.7e-08 62.8 65 40.0
FvH4_2g02561 Fragaria vesca HOM05D000030 ORTHO05D000031 6.4e-08 62.0 66 42.4
FvH4_2g18091 Fragaria vesca HOM05D000030 ORTHO05D000009 6.4e-08 62.0 66 42.4
RcHm_v2.0_Chr6g0283851 Rosa chinensis HOM05D000030 ORTHO05D000031 8.3e-08 61.6 62 40.3
RcHm_v2.0_Chr7g0229391 Rosa chinensis HOM05D000030 ORTHO05D000031 8.3e-08 61.6 58 44.8
MD05G1210500 Malus domestica HOM05D000030 ORTHO05D000031 1.1e-07 61.2 81 38.3
RcHm_v2.0_Chr1g0351191 Rosa chinensis HOM05D000030 ORTHO05D000031 1.4e-07 60.8 76 36.8
FvH4_4g08573 Fragaria vesca HOM05D000030 ORTHO05D000031 1.9e-07 60.5 78 38.5
RcHm_v2.0_Chr5g0007101 Rosa chinensis HOM05D000030 ORTHO05D000031 1.9e-07 60.5 58 44.8
FvH4_4g16143 Fragaria vesca HOM05D000030 ORTHO05D000031 2.4e-07 60.1 57 42.1
Aqoxy5G02513 Aquilegia oxysepala HOM05D000030 ORTHO05D000031 3.2e-07 59.7 66 40.9
FvH4_5g38140 Fragaria vesca HOM05D004520 ORTHO05D000031 3.2e-07 59.7 57 42.1
FvH4_4g09691 Fragaria vesca HOM05D008722 ORTHO05D000031 4.1e-07 59.3 87 43.7
MD00G1006400 Malus domestica HOM05D000030 ORTHO05D000031 4.1e-07 59.3 63 46.0
FvH4_2g00811 Fragaria vesca HOM05D000030 ORTHO05D000031 5.4e-07 58.9 62 41.9
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 5.4e-07 58.9 56 41.1
FvH4_c5g00011 Fragaria vesca HOM05D000030 ORTHO05D013601 5.4e-07 58.9 62 41.9
FvH4_2g19861 Fragaria vesca HOM05D000030 ORTHO05D000031 7.1e-07 58.5 74 37.8
FvH4_4g10393 Fragaria vesca HOM05D000030 ORTHO05D000031 9.2e-07 58.2 62 41.9
RcHm_v2.0_Chr6g0262381 Rosa chinensis HOM05D000030 ORTHO05D000031 1.2e-06 57.8 32 71.9
FvH4_1g17901 Fragaria vesca HOM05D000030 ORTHO05D000031 1.6e-06 57.4 74 37.8
FvH4_1g29581 Fragaria vesca HOM05D000030 ORTHO05D000031 2.1e-06 57.0 74 36.5
FvH4_4g10394 Fragaria vesca HOM05D000030 ORTHO05D000031 2.7e-06 56.6 62 40.3
Hma1.2p1_0348F.1_g131940 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.5e-06 56.2 66 42.4
Hma1.2p1_0705F.1_g206900 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.6e-06 55.8 66 43.9
FvH4_3g17731 Fragaria vesca HOM05D000030 ORTHO05D000031 6.0e-06 55.5 74 36.5
Hma1.2p1_0180F.1_g079730 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.0e-06 55.5 66 42.4
Hma1.2p1_0336F.1_g129040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.0e-06 55.5 66 42.4
Hma1.2p1_0536F.1_g174140 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.0e-06 55.5 66 42.4
FvH4_2g05021 Fragaria vesca HOM05D042008 ORTHO05D000031 7.8e-06 55.1 62 37.1
Hma1.2p1_1553F.1_g290280 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 7.8e-06 55.1 96 36.5


User provided reference genes

Program Settings