Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 5.1e-60 234.2 115 100.0
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.6e-48 195.3 166 66.3
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 9.9e-48 193.4 168 64.9
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 1.3e-47 193.0 168 63.7
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 1.0e-44 183.3 168 62.5
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 3.3e-43 178.3 94 91.5
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 2.7e-37 158.7 92 84.8
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 1.5e-35 152.9 92 82.6
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 1.0e-31 140.2 91 72.5
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 2.9e-31 138.7 94 73.4
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 3.8e-31 138.3 106 67.9
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 6.5e-31 137.5 94 71.3
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 9.3e-30 133.7 88 77.3
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 9.3e-30 133.7 94 69.1
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 4.6e-29 131.3 94 71.3
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 6.0e-29 131.0 94 68.1
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 7.9e-29 130.6 80 76.2
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 1.3e-28 129.8 96 67.7
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 1.8e-28 129.4 161 48.4
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 2.3e-28 129.0 100 67.0
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 2.3e-28 129.0 90 67.8
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 2.3e-28 129.0 94 70.2
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 3.9e-28 128.3 96 67.7
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 6.7e-28 127.5 92 70.7
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 6.7e-28 127.5 94 69.1
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 1.1e-27 126.7 87 73.6
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 1.5e-27 126.3 87 72.4
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 1.5e-27 126.3 124 58.1
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 2.5e-27 125.6 80 73.8
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 2.5e-27 125.6 93 67.7
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 3.3e-27 125.2 95 67.4
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 5.7e-27 124.4 98 67.3
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 9.6e-27 123.6 89 69.7
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 9.6e-27 123.6 92 67.4
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 3.7e-26 121.7 77 77.9
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 3.7e-26 121.7 80 75.0
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 4.8e-26 121.3 91 69.2
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 8.2e-26 120.6 82 72.0
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 8.2e-26 120.6 82 72.0
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 8.2e-26 120.6 82 72.0
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.1e-25 120.2 94 64.9
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 1.1e-25 120.2 91 65.9
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 2.4e-25 119.0 91 64.8
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 3.1e-25 118.6 91 65.9
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 3.1e-25 118.6 94 63.8
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 3.1e-25 118.6 92 66.3
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 4.1e-25 118.2 82 72.0
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 4.1e-25 118.2 83 65.1
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 4.1e-25 118.2 92 65.2
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 4.1e-25 118.2 80 73.8
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 6.9e-25 117.5 80 73.8
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 2.0e-24 115.9 80 67.5
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 2.6e-24 115.5 91 64.8
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 3.4e-24 115.2 130 49.2
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 1.3e-23 113.2 95 62.1
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 1.7e-23 112.8 80 71.2
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 2.9e-23 112.1 95 62.1
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 5.0e-23 111.3 80 70.0
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 1.1e-22 110.2 81 65.4
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 1.1e-22 110.2 94 61.7
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 3.2e-22 108.6 155 45.2
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 5.5e-22 107.8 99 60.6
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 7.2e-22 107.5 93 58.1
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 1.6e-21 106.3 81 66.7
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 6.1e-21 104.4 94 59.6
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 1.3e-20 103.2 87 60.9
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 1.3e-20 103.2 98 54.1
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 1.3e-20 103.2 81 64.2
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 2.3e-20 102.4 79 63.3
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 2.3e-20 102.4 83 61.4
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 3.9e-20 101.7 79 60.8
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 5.1e-20 101.3 79 60.8
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 6.7e-20 100.9 79 67.1
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 1.9e-19 99.4 79 59.5
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 1.9e-19 99.4 79 59.5
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 2.5e-19 99.0 94 55.3
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 2.5e-19 99.0 81 59.3
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 2.5e-19 99.0 81 63.0
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 3.3e-19 98.6 79 59.5
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 4.3e-19 98.2 101 48.5
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 4.3e-19 98.2 77 62.3
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 5.7e-19 97.8 95 54.7
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 1.6e-18 96.3 79 55.7
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 1.6e-18 96.3 79 55.7
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 1.6e-18 96.3 79 55.7
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 2.8e-18 95.5 90 55.6
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 4.8e-18 94.7 95 55.8
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.3e-18 94.4 66 69.7
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 1.2e-16 90.1 100 49.0
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 1.7e-15 86.3 72 55.6
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 2.9e-15 85.5 81 58.0
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 2.9e-15 85.5 79 51.9
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 7.2e-14 80.9 86 52.3
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 9.4e-14 80.5 68 57.4
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 1.6e-13 79.7 44 86.4
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.0e-12 75.5 82 53.7
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 3.3e-11 72.0 58 56.9
MD17G1110300 Malus domestica HOM05D007186 ORTHO05D008970 9.7e-11 70.5 47 74.5
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 6.3e-10 67.8 60 58.3
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 5.0e-07 58.2 44 65.9
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 5.0e-07 58.2 84 35.7


User provided reference genes

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