Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.0e-139 500.0 241 100.0
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.2e-124 449.9 236 92.4
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 8.0e-124 447.2 251 86.1
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 3.1e-120 435.3 231 91.8
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 4.6e-103 378.3 262 71.8
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 6.2e-100 367.9 260 69.6
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 6.2e-92 341.3 192 87.0
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 6.2e-92 341.3 243 69.5
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 4.9e-89 331.6 244 66.0
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 1.4e-88 330.1 243 67.5
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 1.4e-88 330.1 211 72.5
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 3.2e-88 328.9 236 69.1
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.7e-87 325.9 247 66.8
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 2.7e-87 325.9 218 71.1
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 3.5e-87 325.5 244 66.8
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 1.0e-86 323.9 205 72.7
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 1.3e-86 323.6 250 64.8
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 1.7e-86 323.2 217 72.4
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 2.3e-86 322.8 207 72.5
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 2.3e-86 322.8 207 72.5
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 3.3e-85 318.9 213 70.0
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 3.3e-85 318.9 246 66.7
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 7.3e-85 317.8 247 65.2
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 9.5e-85 317.4 225 66.7
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 1.2e-84 317.0 234 65.8
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 1.2e-84 317.0 247 63.6
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 1.6e-84 316.6 244 63.5
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 1.6e-84 316.6 211 68.2
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 2.1e-84 316.2 243 64.6
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 2.1e-84 316.2 251 63.3
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 2.8e-84 315.8 251 64.5
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 3.6e-84 315.5 221 66.5
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 3.6e-84 315.5 251 64.5
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 1.1e-83 313.9 247 63.6
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 2.3e-83 312.8 234 66.2
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 5.2e-83 311.6 238 61.3
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 8.9e-83 310.8 243 63.0
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 1.5e-82 310.1 198 72.7
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.6e-82 309.3 244 61.9
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 3.4e-82 308.9 198 72.2
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 3.4e-82 308.9 229 65.1
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 3.4e-82 308.9 234 65.0
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 4.4e-82 308.5 247 62.3
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 7.6e-82 307.8 200 70.5
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 7.6e-82 307.8 244 60.7
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 9.9e-82 307.4 228 64.5
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 9.9e-82 307.4 234 64.5
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 4.9e-81 305.1 227 62.6
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 1.9e-80 303.1 258 58.9
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 7.1e-80 301.2 252 59.5
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 9.2e-80 300.8 235 62.6
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 1.2e-79 300.4 236 61.4
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 1.6e-79 300.1 229 64.2
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 2.1e-79 299.7 252 59.1
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 3.5e-79 298.9 209 65.6
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 1.0e-78 297.4 212 66.0
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 1.7e-78 296.6 205 65.9
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 3.9e-78 295.4 205 65.4
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 8.6e-78 294.3 246 60.6
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 8.6e-78 294.3 205 64.4
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.9e-77 293.1 271 53.9
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 2.5e-77 292.7 201 63.2
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 3.3e-77 292.4 244 57.0
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 4.3e-77 292.0 249 59.0
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 7.3e-77 291.2 197 67.5
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 6.2e-76 288.1 207 65.2
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 1.1e-75 287.3 242 57.0
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 1.1e-75 287.3 197 66.5
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.4e-75 287.0 202 66.8
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 2.4e-75 286.2 227 59.9
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 3.1e-75 285.8 197 66.5
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 3.1e-75 285.8 228 58.8
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 5.8e-74 281.6 221 61.1
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 7.6e-74 281.2 228 59.2
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 1.4e-72 276.9 229 59.0
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 1.7e-70 270.0 172 72.1
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 2.3e-70 269.6 209 65.6
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 3.9e-70 268.9 222 58.6
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 4.3e-69 265.4 163 72.4
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 4.3e-69 265.4 173 70.5
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 5.6e-69 265.0 163 71.8
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.6e-68 263.5 197 59.9
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 1.4e-67 260.4 213 62.4
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 2.2e-65 253.1 212 59.9
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 8.4e-65 251.1 251 54.6
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 3.5e-63 245.7 175 65.1
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 2.8e-60 236.1 200 54.5
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 3.6e-60 235.7 192 55.7
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 4.0e-59 232.3 218 50.0
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.2e-58 230.7 154 73.4
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 7.6e-58 228.0 170 64.7
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 1.7e-57 226.9 196 52.0
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 8.4e-57 224.6 215 50.2
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 1.4e-56 223.8 133 77.4
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.5e-53 213.0 165 59.4
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 3.7e-52 209.1 134 70.1
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 1.2e-47 194.1 125 71.2
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 6.7e-46 188.3 127 72.4
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 4.3e-45 185.7 200 46.5
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 7.4e-45 184.9 104 76.9
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.6e-39 167.2 202 46.0
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 3.9e-38 162.5 95 72.6
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 3.7e-36 156.0 195 40.0
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 1.1e-35 154.5 227 39.2
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 9.0e-35 151.4 81 88.9
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 1.7e-28 130.6 92 60.9
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 6.9e-27 125.2 77 75.3
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 9.4e-24 114.8 88 59.1
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 4.8e-20 102.4 54 85.2
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 5.0e-17 92.4 78 59.0
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 2.1e-15 87.0 49 79.6
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 3.6e-15 86.3 50 76.0
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 1.2e-13 81.3 68 51.5
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 2.0e-13 80.5 60 66.7
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 4.5e-10 69.3 75 42.7
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 7.7e-10 68.6 42 69.0
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 7.7e-10 68.6 42 69.0
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 7.7e-10 68.6 42 69.0
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 7.7e-10 68.6 42 69.0
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 2.2e-09 67.0 41 68.3
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 6.1e-07 58.9 34 73.5
AagrBONN_evm.TU.Sc2ySwM_368.930 Anthoceros agrestis HOM05D022947 ORTHO05D023489 8.8e-06 55.1 107 29.0


User provided reference genes

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