Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3575 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.6e-108 396.4 232 100.0
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 6.3e-94 347.8 231 90.9
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 5.4e-53 211.8 234 66.2
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 4.3e-42 175.6 105 93.3
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 3.4e-39 166.0 105 90.5
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 5.7e-26 122.1 237 45.1
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 1.8e-19 100.5 241 41.5
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 5.7e-18 95.5 241 36.9
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 1.1e-16 91.3 169 42.0
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 5.3e-16 89.0 174 41.4
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 6.9e-16 88.6 201 36.3
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 1.3e-14 84.3 239 36.4
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 2.2e-14 83.6 181 41.4
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 6.5e-14 82.0 180 42.8
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 6.5e-14 82.0 243 37.0
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 1.1e-13 81.3 175 41.1
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 1.4e-13 80.9 233 36.1
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 1.4e-13 80.9 159 41.5
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 1.4e-13 80.9 176 38.6
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 2.5e-13 80.1 234 34.6
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 9.4e-13 78.2 196 38.3
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 1.6e-12 77.4 235 35.3
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 2.1e-12 77.0 231 33.8
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 1.0e-11 74.7 245 34.7
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 1.0e-11 74.7 240 35.4
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 1.4e-11 74.3 180 37.8
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 3.0e-11 73.2 182 38.5
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 8.8e-11 71.6 171 38.6
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 8.8e-11 71.6 171 38.6
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 2.6e-10 70.1 172 35.5
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 2.2e-09 67.0 216 35.6
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 2.8e-09 66.6 102 47.1
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 3.7e-09 66.2 231 29.9
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 6.3e-09 65.5 179 35.8
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 8.2e-09 65.1 194 33.5
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 1.4e-08 64.3 229 33.2
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 1.4e-08 64.3 266 31.6
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 4.1e-08 62.8 140 38.6
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 9.1e-08 61.6 133 36.8
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 1.2e-07 61.2 161 36.6
Ca_26016_v3 Cicer arietinum L. HOM05D007490 ORTHO05D008750 1.5e-07 60.8 162 34.0
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 2.0e-07 60.5 162 37.7
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 3.4e-07 59.7 236 33.9
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 4.5e-07 59.3 162 35.8
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 5.9e-07 58.9 177 33.9
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 1.0e-06 58.2 183 35.0
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 1.3e-06 57.8 159 35.2
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 2.2e-06 57.0 136 37.5
BraA09t40485Z Brassica rapa HOM05D014273 ORTHO05D008750 2.2e-06 57.0 136 37.5
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 2.9e-06 56.6 178 31.5
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 2.9e-06 56.6 241 31.5
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 2.9e-06 56.6 161 34.8
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 2.9e-06 56.6 187 33.7
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 3.8e-06 56.2 238 31.5
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 3.8e-06 56.2 243 31.7
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 6.5e-06 55.5 41 63.4
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 6.5e-06 55.5 46 63.0
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 6.5e-06 55.5 43 67.4
Duzib205G1398 Durio zibethinus HOM05D007490 ORTHO05D008750 6.5e-06 55.5 177 34.5
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 6.5e-06 55.5 231 28.6
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 8.5e-06 55.1 126 35.7
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 8.5e-06 55.1 234 28.6


User provided reference genes

Program Settings