Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3540 Fragaria x ananassa HOM05D025868 ORTHO05D001711 1.5e-147 526.2 269 100.0
FAN05G2755 Fragaria x ananassa HOM05D025868 ORTHO05D001711 1.3e-135 486.5 272 89.7
FvH4_6g30290 Fragaria vesca HOM05D025868 ORTHO05D001711 2.1e-133 479.2 276 87.3
RcHm_v2.0_Chr2g0136531 Rosa chinensis HOM05D025868 ORTHO05D001711 1.1e-105 387.1 274 71.5
Prupe.3G080200 Prunus persica HOM05D001781 ORTHO05D001711 2.8e-29 133.3 295 34.9
Prupe.3G080700 Prunus persica HOM05D001781 ORTHO05D001711 6.1e-24 115.5 295 31.5
MD17G1205200 Malus domestica HOM05D001781 ORTHO05D001711 1.1e-20 104.8 290 32.4
MD17G1204700 Malus domestica HOM05D001781 ORTHO05D001711 6.2e-16 89.0 226 32.7
Prupe.3G083300 Prunus persica HOM05D001781 ORTHO05D001711 4.0e-15 86.3 121 42.1
Manes.11G052900 Manihot esculenta HOM05D001781 ORTHO05D001711 2.0e-14 84.0 232 31.0
Actinidia15795 Actinidia chinensis HOM05D001781 ORTHO05D001711 3.2e-12 76.6 264 28.8
CSS0002175 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 3.2e-12 76.6 273 26.0
GSVIVG01017255001 Vitis vinifera HOM05D001781 ORTHO05D001711 4.1e-12 76.3 274 26.6
Potri.003G061600 Populus trichocarpa HOM05D001781 ORTHO05D001711 7.0e-12 75.5 300 27.7
Nn2g11963 Nelumbo nucifera HOM05D001781 ORTHO05D001711 2.3e-10 70.5 307 24.1
TAR625G1385 Trochodendron aralioides HOM05D001781 ORTHO05D001711 5.0e-10 69.3 293 26.6
Nn8g39386 Nelumbo nucifera HOM05D001781 ORTHO05D001711 8.6e-10 68.6 251 27.9
Sc08g0006760 Simmondsia chinensis HOM05D001781 ORTHO05D001711 1.9e-09 67.4 298 24.5
Prupe.7G239500 Prunus persica HOM05D001781 ORTHO05D001711 4.3e-09 66.2 263 25.9
Sabra03G0035700 Salix brachista HOM05D001781 ORTHO05D001711 9.5e-09 65.1 292 26.4
Ciclev10008851m.g Citrus clementina HOM05D001781 ORTHO05D001711 6.2e-08 62.4 252 26.2
MD02G1035700 Malus domestica HOM05D001781 ORTHO05D001711 6.2e-08 62.4 253 24.5
Cfa003345 Carpinus fangiana HOM05D001781 ORTHO05D001711 1.4e-07 61.2 293 23.9
MD15G1175900 Malus domestica HOM05D001781 ORTHO05D001711 1.4e-07 61.2 253 25.7
Aqoxy7G02095 Aquilegia oxysepala HOM05D001781 ORTHO05D001711 2.3e-07 60.5 284 26.8
Lj4g0027268 Lotus japonicus HOM05D001781 ORTHO05D001711 2.3e-07 60.5 305 24.6
TWI34G1451 Tripterygium wilfordii HOM05D001781 ORTHO05D001711 2.3e-07 60.5 312 24.0
Duzib187G1560 Durio zibethinus HOM05D001781 ORTHO05D001711 4.0e-07 59.7 258 24.0
Sc18g0000720 Simmondsia chinensis HOM05D001781 ORTHO05D001711 6.8e-07 58.9 282 25.2
arahy.Tifrunner.gnm1.ann1.JJB9SI Arachis hypogaea HOM05D001781 ORTHO05D001711 8.9e-07 58.5 277 24.9
Rhsim08G0216100 Rhododendron simsii HOM05D001781 ORTHO05D001711 8.9e-07 58.5 273 25.6
arahy.Tifrunner.gnm1.ann1.B60469 Arachis hypogaea HOM05D001781 ORTHO05D001711 1.2e-06 58.2 282 25.2
Duzib168G2385 Durio zibethinus HOM05D001781 ORTHO05D001711 1.2e-06 58.2 252 22.6
PSO170G3589 Papaver somniferum HOM05D001781 ORTHO05D001711 1.2e-06 58.2 248 29.0
FAN26G1253 Fragaria x ananassa HOM05D001781 ORTHO05D001711 1.5e-06 57.8 296 22.6
Glyma.17G116700 Glycine max HOM05D001781 ORTHO05D001711 1.5e-06 57.8 261 24.9
Psat0s4391g0080 Pisum sativum HOM05D001781 ORTHO05D001711 1.5e-06 57.8 270 25.2
QL02p087754 Quercus lobata HOM05D001781 ORTHO05D001711 1.5e-06 57.8 296 24.0
SHI22515 Sapria himalayana HOM05D001781 ORTHO05D001711 1.5e-06 57.8 298 24.5
COL.COLO4_05760 Corchorus olitorius HOM05D001781 ORTHO05D001711 2.0e-06 57.4 303 22.8
Psat4g041760 Pisum sativum HOM05D001781 ORTHO05D001711 2.0e-06 57.4 294 25.2
Atru.chr7.1195 Acer truncatum HOM05D001781 ORTHO05D001711 2.6e-06 57.0 254 26.0
Thecc.09G122900 Theobroma cacao HOM05D001781 ORTHO05D001711 2.6e-06 57.0 312 23.4
MSTRG.26142 Avicennia marina HOM05D001781 ORTHO05D001711 4.4e-06 56.2 303 21.5
Ca_21697_v3 Cicer arietinum L. HOM05D001781 ORTHO05D001711 4.4e-06 56.2 287 24.0
Manes.14G130400 Manihot esculenta HOM05D001781 ORTHO05D001711 4.4e-06 56.2 310 24.2
Medtr3g050390 Medicago truncatula HOM05D001781 ORTHO05D001711 4.4e-06 56.2 218 27.5
Medtr4g113940 Medicago truncatula HOM05D001781 ORTHO05D001711 4.4e-06 56.2 235 26.0
MBI06_g09277_MAGBIO Magnolia biondii HOM05D001781 ORTHO05D001711 5.8e-06 55.8 247 25.1
Glyma.05G008400 Glycine max HOM05D001781 ORTHO05D001711 9.9e-06 55.1 261 24.1
Medtr4g113860 Medicago truncatula HOM05D001781 ORTHO05D001711 9.9e-06 55.1 282 24.8


User provided reference genes

Program Settings