Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3439 Fragaria x ananassa HOM05D011989 ORTHO05D013884 3.0e-43 178.3 106 100.0
FAN10G2367 Fragaria x ananassa HOM05D011989 ORTHO05D013884 5.0e-30 134.4 93 90.3
FAN05G3592 Fragaria x ananassa HOM05D011989 ORTHO05D013884 1.2e-26 123.2 99 77.8
FvH4_1g19462 Fragaria vesca HOM05D000214 ORTHO05D012374 4.1e-24 114.8 93 67.7
RcHm_v2.0_Chr4g0399161 Rosa chinensis HOM05D000214 ORTHO05D000131 1.2e-18 96.7 105 46.7
RcHm_v2.0_Chr1g0318041 Rosa chinensis HOM05D000214 ORTHO05D000131 2.9e-17 92.0 72 58.3
FAN15G2874 Fragaria x ananassa HOM05D011989 ORTHO05D013884 8.3e-17 90.5 79 72.2
FAN05G4208 Fragaria x ananassa HOM05D011989 ORTHO05D013884 1.2e-15 86.7 65 92.3
FvH4_2g22601 Fragaria vesca HOM05D000214 ORTHO05D000131 1.1e-13 80.1 72 51.4
FAN02G2907 Fragaria x ananassa HOM05D011989 ORTHO05D013884 3.3e-13 78.6 63 58.7
RcHm_v2.0_Chr7g0200351 Rosa chinensis HOM05D000214 ORTHO05D000131 1.2e-12 76.6 72 50.0
FvH4_4g14181 Fragaria vesca HOM05D000214 ORTHO05D000131 1.6e-12 76.3 72 48.6
FAN12G3193 Fragaria x ananassa HOM05D011989 ORTHO05D013884 1.6e-12 76.3 96 46.9
FvH4_3g39621 Fragaria vesca HOM05D000214 ORTHO05D013884 2.8e-12 75.5 69 52.2
FAN06G3713 Fragaria x ananassa HOM05D005822 ORTHO05D007267 3.6e-12 75.1 62 90.3
FvH4_5g16781 Fragaria vesca HOM05D000214 ORTHO05D000131 1.1e-11 73.6 65 58.5
FAN02G2688 Fragaria x ananassa HOM05D011989 ORTHO05D013884 1.4e-11 73.2 62 54.8
FAN16G0667 Fragaria x ananassa HOM05D011989 ORTHO05D013884 1.8e-11 72.8 65 53.8
FAN05G4936 Fragaria x ananassa HOM05D000214 ORTHO05D012374 5.2e-11 71.2 59 52.5
FAN11G0504 Fragaria x ananassa HOM05D011989 ORTHO05D013884 9.9e-10 67.0 61 52.5
FAN21G0161 Fragaria x ananassa HOM05D011989 ORTHO05D013884 1.7e-09 66.2 61 50.8
FAN14G1372 Fragaria x ananassa HOM05D034107 ORTHO05D000131 2.2e-09 65.9 30 93.3
FAN03G2354 Fragaria x ananassa HOM05D011989 ORTHO05D013884 1.6e-07 59.7 49 55.1
CARHR258710 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.7e-06 56.2 68 45.6
CANSAT01G2145 Cannabis sativa HOM05D000214 ORTHO05D000131 2.3e-06 55.8 70 41.4
CANSAT78G2396 Cannabis sativa HOM05D000214 ORTHO05D000131 2.3e-06 55.8 70 41.4
HanXRQChr04g0114761 Helianthus annuus HOM05D000214 ORTHO05D000131 3.0e-06 55.5 51 45.1
TWI18G0616 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.9e-06 55.1 63 42.9
TWI60G1261 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.9e-06 55.1 63 41.3
TWI34G1310 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.1e-06 54.7 63 41.3
Pp3c1_25860 Physcomitrium patens HOM05D000214 ORTHO05D000131 6.6e-06 54.3 71 36.6


User provided reference genes

Program Settings