Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.5e-81 306.2 162 100.0
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.1e-80 302.4 162 98.1
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 4.8e-80 301.2 162 97.5
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 4.8e-80 301.2 162 97.5
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 4.9e-77 291.2 162 96.9
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 7.6e-70 267.3 163 89.0
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 6.5e-29 131.3 177 52.0
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 4.7e-19 98.6 175 42.3
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 4.0e-18 95.5 124 50.8
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 5.2e-18 95.1 164 43.9
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 2.0e-17 93.2 128 50.0
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 6.3e-16 88.2 132 45.5
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 1.8e-15 86.7 164 42.7
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 3.1e-15 85.9 152 44.1
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 5.4e-15 85.1 167 39.5
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 4.5e-14 82.0 181 39.2
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 5.9e-14 81.6 160 41.2
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 5.9e-14 81.6 177 38.4
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 6.5e-13 78.2 155 40.6
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 5.5e-12 75.1 177 38.4
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 7.2e-12 74.7 156 39.7
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 1.2e-11 73.9 166 38.0
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 1.6e-11 73.6 164 36.0
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 2.7e-11 72.8 182 34.1
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 2.7e-11 72.8 161 38.5
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 3.6e-11 72.4 159 35.8
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 4.7e-11 72.0 161 37.3
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 1.0e-10 70.9 159 37.7
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 1.4e-10 70.5 174 38.5
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 1.8e-10 70.1 176 35.8
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 2.3e-10 69.7 167 37.7
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 5.2e-10 68.6 130 40.0
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 6.8e-10 68.2 171 36.8
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 8.8e-10 67.8 176 38.6
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 8.8e-10 67.8 176 38.6
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 8.8e-10 67.8 176 38.6
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 2.0e-09 66.6 143 39.9
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 2.6e-09 66.2 165 35.8
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 3.4e-09 65.9 134 35.8
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 5.7e-09 65.1 136 40.4
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 5.7e-09 65.1 164 35.4
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 7.5e-09 64.7 140 35.7
Lalb_Chr02g0159931 Lupinus albus HOM05D007804 ORTHO05D009828 7.5e-09 64.7 135 39.3
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 1.3e-08 63.9 145 36.6
BcaC06g30917 Brassica carinata HOM05D007804 ORTHO05D009828 2.2e-08 63.2 144 36.1
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 2.2e-08 63.2 159 39.6
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 2.2e-08 63.2 167 33.5
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 2.8e-08 62.8 173 32.9
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 2.8e-08 62.8 160 38.1
Aa31LG2G4650 Aethionema arabicum HOM05D007804 ORTHO05D009828 4.9e-08 62.0 193 35.2
Nn4g22964 Nelumbo nucifera HOM05D007804 ORTHO05D009828 6.3e-08 61.6 162 36.4
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 1.1e-07 60.8 131 38.2
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 1.8e-07 60.1 153 39.9
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 1.8e-07 60.1 183 35.5
BraA02t08592Z Brassica rapa HOM05D007804 ORTHO05D009828 1.8e-07 60.1 174 37.4
TAR622G0153 Trochodendron aralioides HOM05D007804 ORTHO05D009828 1.8e-07 60.1 163 29.4
Thhalv10004896m.g Eutrema salsugineum HOM05D007804 ORTHO05D009828 3.1e-07 59.3 197 35.0
A02p35930 Brassica napus HOM05D007804 ORTHO05D009828 4.1e-07 58.9 174 37.4
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 4.1e-07 58.9 180 36.7
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 4.1e-07 58.9 177 33.9
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 4.1e-07 58.9 208 35.1
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 5.4e-07 58.5 126 37.3
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 7.0e-07 58.2 135 33.3
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 7.0e-07 58.2 166 32.5
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 7.0e-07 58.2 166 32.5
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 9.2e-07 57.8 187 31.6
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 9.2e-07 57.8 156 35.9
BcaC06g33740 Brassica carinata HOM05D007804 ORTHO05D009828 1.2e-06 57.4 149 36.9
AT3G28420 Arabidopsis thaliana HOM05D007804 ORTHO05D009828 1.6e-06 57.0 181 34.8
Sp2g17190 Schrenkiella parvula HOM05D007804 ORTHO05D009828 1.6e-06 57.0 166 34.3
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 2.7e-06 56.2 170 32.9
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 3.5e-06 55.8 173 34.7
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 3.5e-06 55.8 118 41.5
C07p37470 Brassica napus HOM05D000068 ORTHO05D009828 4.5e-06 55.5 180 35.0
BolC7t44259H Brassica oleracea HOM05D000068 ORTHO05D009828 4.5e-06 55.5 180 35.0


User provided reference genes

Program Settings