Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3381 Fragaria x ananassa HOM05D006908 ORTHO05D008662 1.7e-122 442.6 213 100.0
FAN09G3067 Fragaria x ananassa HOM05D006908 ORTHO05D008662 9.0e-87 323.9 238 73.9
FAN05G1986 Fragaria x ananassa HOM05D006908 ORTHO05D008662 1.7e-85 319.7 238 72.7
FvH4_6g31280 Fragaria vesca HOM05D006908 ORTHO05D008662 2.3e-82 309.3 238 71.8
RcHm_v2.0_Chr2g0138011 Rosa chinensis HOM05D006908 ORTHO05D008662 1.4e-71 273.5 229 64.6
Prupe.3G070300 Prunus persica HOM05D006908 ORTHO05D008662 1.5e-62 243.4 220 57.7
MD17G1194300 Malus domestica HOM05D006908 ORTHO05D008662 4.2e-60 235.3 238 53.4
Haze_16403 Corylus avellana HOM05D006908 ORTHO05D008662 9.1e-55 217.6 229 52.8
Dinv38042 Davidia involucrata HOM05D006908 ORTHO05D008662 9.4e-52 207.6 229 51.5
QL05p023344 Quercus lobata HOM05D006908 ORTHO05D008662 1.2e-51 207.2 229 51.1
Gorai.006G098400 Gossypium raimondii HOM05D006908 ORTHO05D008662 6.7e-50 201.4 235 46.8
Hma1.2p1_0323F.1_g125120 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 8.8e-50 201.1 229 48.5
CiPaw.01G238600 Carya illinoinensis HOM05D006908 ORTHO05D008662 7.5e-49 198.0 228 49.6
Sabra01G0145800 Salix brachista HOM05D006908 ORTHO05D008662 9.7e-49 197.6 234 48.7
GSVIVG01017098001 Vitis vinifera HOM05D006908 ORTHO05D008662 1.3e-48 197.2 229 48.5
CANSAT56G3342 Cannabis sativa HOM05D006908 ORTHO05D008662 3.7e-48 195.7 229 47.2
Duzib160G0703 Durio zibethinus HOM05D006908 ORTHO05D008662 4.8e-48 195.3 237 46.8
Thecc.06G089400 Theobroma cacao HOM05D006908 ORTHO05D008662 1.4e-47 193.7 235 45.5
Lj3g0017668 Lotus japonicus HOM05D006908 ORTHO05D008662 4.1e-47 192.2 229 49.3
Ciclev10025928m.g Citrus clementina HOM05D006908 ORTHO05D008662 7.0e-47 191.4 238 44.5
Atru.chr1.3281 Acer truncatum HOM05D006908 ORTHO05D008662 1.2e-46 190.7 229 48.5
CSS0010187 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 1.6e-46 190.3 227 46.7
Eucgr.J02986 Eucalyptus grandis HOM05D006908 ORTHO05D008662 1.6e-46 190.3 237 46.4
Glyma.15G014900 Glycine max HOM05D006908 ORTHO05D008662 2.0e-46 189.9 229 48.9
TAR626G0624 Trochodendron aralioides HOM05D006908 ORTHO05D008662 2.7e-46 189.5 234 47.0
PSO782G4818 Papaver somniferum HOM05D006908 ORTHO05D008662 3.5e-46 189.1 230 46.1
Lalb_Chr22g0351301 Lupinus albus HOM05D006908 ORTHO05D008662 4.5e-46 188.7 229 48.5
Rhsim08G0222000 Rhododendron simsii HOM05D006908 ORTHO05D008662 4.5e-46 188.7 229 45.9
TPR.G37174 Trifolium pratense HOM05D006908 ORTHO05D008662 7.7e-46 188.0 230 48.3
VMungo1080G1808 Vigna mungo HOM05D006908 ORTHO05D008662 7.7e-46 188.0 229 48.0
vmacro18903 Vaccinium macrocarpon HOM05D006908 ORTHO05D008662 1.0e-45 187.6 229 46.3
Nn8g39204 Nelumbo nucifera HOM05D006908 ORTHO05D008662 1.3e-45 187.2 230 47.4
DCAR_023055 Daucus carota HOM05D006908 ORTHO05D008662 1.7e-45 186.8 231 45.9
Lj5C59T9 Lonicera japonica HOM05D006908 ORTHO05D008662 5.0e-45 185.3 228 45.2
Medtr2g102040 Medicago truncatula HOM05D006908 ORTHO05D008662 6.5e-45 184.9 229 47.6
Ca_01120_v3 Cicer arietinum L. HOM05D006908 ORTHO05D008662 8.5e-45 184.5 229 47.2
Sc10g0007370 Simmondsia chinensis HOM05D006908 ORTHO05D008662 8.5e-45 184.5 229 46.7
Manes.11G045900 Manihot esculenta HOM05D006908 ORTHO05D008662 2.5e-44 183.0 230 47.4
Psat5g298720 Pisum sativum HOM05D006908 ORTHO05D008662 3.2e-44 182.6 229 46.7
PGSC0003DMG400005687 Solanum tuberosum HOM05D006908 ORTHO05D008662 4.2e-44 182.2 240 45.8
Actinidia01807 Actinidia chinensis HOM05D006908 ORTHO05D008662 7.2e-44 181.4 229 45.4
Nitab4.5_0000671g0150 Nicotiana tabacum HOM05D006908 ORTHO05D008662 1.6e-43 180.3 213 50.2
PSO063G2605 Papaver somniferum HOM05D006908 ORTHO05D008662 2.1e-43 179.9 230 43.9
Phvul.005G170700 Phaseolus vulgaris HOM05D006908 ORTHO05D008662 2.1e-43 179.9 238 45.0
TWI75G1463 Tripterygium wilfordii HOM05D006908 ORTHO05D008662 4.7e-43 178.7 229 44.5
COL.COLO4_30388 Corchorus olitorius HOM05D006908 ORTHO05D008662 6.1e-43 178.3 230 45.7
ClCG07G013040 Citrullus lanatus HOM05D006908 ORTHO05D008662 1.8e-42 176.8 232 47.8
arahy.Tifrunner.gnm1.ann1.0IDI1A Arachis hypogaea HOM05D006908 ORTHO05D008662 3.0e-42 176.0 230 46.5
arahy.Tifrunner.gnm1.ann1.UK934I Arachis hypogaea HOM05D006908 ORTHO05D008662 3.0e-42 176.0 230 46.5
Sopen03g039000 Solanum pennellii HOM05D006908 ORTHO05D008662 6.8e-42 174.9 238 44.5
PGR102G2040 Punica granatum HOM05D006908 ORTHO05D008662 2.6e-41 172.9 229 43.7
Solyc03g120130.4 Solanum lycopersicum HOM05D006908 ORTHO05D008662 2.6e-41 172.9 236 44.9
CAN.G438.72 Capsicum annuum HOM05D006908 ORTHO05D008662 3.4e-41 172.6 235 44.7
Gohir.D09G082700 Gossypium hirsutum HOM05D006908 ORTHO05D008662 3.4e-41 172.6 184 48.4
Aqoxy7G01689 Aquilegia oxysepala HOM05D006908 ORTHO05D008662 5.7e-41 171.8 224 43.8
CsaV3_3G025130 Cucumis sativus L. HOM05D006908 ORTHO05D008662 5.7e-41 171.8 232 46.6
EL10Ac9g22006 Beta vulgaris HOM05D006908 ORTHO05D008662 7.5e-41 171.4 229 46.7
Oeu063957.2 Olea europaea HOM05D006908 ORTHO05D008662 9.8e-41 171.0 228 44.7
Sed0021689 Sechium edule HOM05D006908 ORTHO05D008662 1.3e-40 170.6 232 44.8
MELO3C012958.2 Cucumis melo HOM05D006908 ORTHO05D008662 3.7e-40 169.1 232 46.1
ECA247G1365 Erigeron canadensis HOM05D006908 ORTHO05D008662 4.8e-40 168.7 229 45.9
Migut.I00872 Erythranthe guttata HOM05D006908 ORTHO05D008662 6.3e-40 168.3 239 43.1
Cpa.g.sc0.185 Carica papaya HOM05D006908 ORTHO05D008662 2.4e-39 166.4 215 47.0
Hund06614 Selenicereus undatus HOM05D006908 ORTHO05D008662 2.4e-39 166.4 228 44.3
Ah.01g005440 Amaranthus hybridus HOM05D006908 ORTHO05D008662 7.0e-39 164.9 229 44.5
Nitab4.5_0002308g0060 Nicotiana tabacum HOM05D006908 ORTHO05D008662 1.6e-38 163.7 232 45.3
SalBow2G2262 Salvia bowleyana HOM05D006908 ORTHO05D008662 2.7e-38 162.9 231 42.0
Cc04_g03340 Coffea canephora HOM05D006908 ORTHO05D008662 4.5e-38 162.2 228 42.5
HanXRQChr02g0032801 Helianthus annuus HOM05D006908 ORTHO05D008662 4.5e-38 162.2 237 42.2
MSTRG.11073 Avicennia marina HOM05D006908 ORTHO05D008662 7.7e-38 161.4 230 40.9
Gohir.A09G082800 Gossypium hirsutum HOM05D006908 ORTHO05D008662 7.7e-38 161.4 226 42.0
HPP92_003725 Vanilla planifolia HOM05D006908 ORTHO05D008662 3.8e-37 159.1 230 41.7
ATR0602G186 Amborella trichopoda HOM05D006908 ORTHO05D008662 1.9e-36 156.8 229 40.2
SHI10939 Sapria himalayana HOM05D006908 ORTHO05D008662 1.9e-36 156.8 232 39.7
Aa31LG4G230 Aethionema arabicum HOM05D006908 ORTHO05D008662 4.2e-36 155.6 230 42.2
CDE02G0011 Ceratophyllum demersum HOM05D006908 ORTHO05D008662 4.2e-36 155.6 233 42.5
Os06g0639300 Oryza sativa ssp. japonica HOM05D006908 ORTHO05D008662 9.4e-36 154.5 237 40.1
Sp5g35850 Schrenkiella parvula HOM05D006908 ORTHO05D008662 1.2e-35 154.1 228 40.8
CSS0029579 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 1.6e-35 153.7 178 46.6
CARHR074570 Cardamine hirsuta HOM05D006908 ORTHO05D008662 1.6e-35 153.7 229 41.5
THA.LOC104812520 Tarenaya hassleriana HOM05D006908 ORTHO05D008662 1.6e-35 153.7 233 42.9
Thhalv10018901m.g Eutrema salsugineum HOM05D006908 ORTHO05D008662 2.7e-35 152.9 229 42.4
AUR62042927 Chenopodium quinoa HOM05D006908 ORTHO05D008662 4.7e-35 152.1 250 41.6
Carub.0002s2758 Capsella rubella HOM05D006908 ORTHO05D008662 1.4e-34 150.6 231 41.6
Zm00001eb275430 Zea mays HOM05D006908 ORTHO05D008662 4.0e-34 149.1 231 40.3
Peaxi162Scf00015g00453 Petunia axillaris HOM05D006908 ORTHO05D008662 6.8e-34 148.3 231 42.4
SEGI_13943 Sequoiadendron giganteum HOM05D006908 ORTHO05D008662 8.8e-34 147.9 245 38.0
AUR62016450 Chenopodium quinoa HOM05D006908 ORTHO05D008662 2.6e-33 146.4 246 41.1
AT1G79915 Arabidopsis thaliana HOM05D006908 ORTHO05D008662 7.5e-33 144.8 229 41.5
Potri.001G181200 Populus trichocarpa HOM05D006908 ORTHO05D008662 1.1e-31 141.0 189 46.0
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 1.4e-31 140.6 226 39.8
Hma1.2p1_0323F.1_g125130 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 9.2e-31 137.9 186 44.1
Mapoly0072s0004 Marchantia polymorpha HOM05D006908 ORTHO05D008662 1.2e-30 137.5 241 36.1
BcaC08g47592 Brassica carinata HOM05D002960 ORTHO05D003632 1.3e-29 134.0 226 39.4
C06p54330 Brassica napus HOM05D002960 ORTHO05D003632 1.3e-29 134.0 226 39.4
BolC6t40444H Brassica oleracea HOM05D002960 ORTHO05D003632 1.3e-29 134.0 226 39.4
Lsat_1_v5_gn_1_35121 Lactuca sativa HOM05D006908 ORTHO05D008662 2.9e-29 132.9 218 41.3
MBI15_g13424_MAGBIO Magnolia biondii HOM05D006908 ORTHO05D008662 5.0e-29 132.1 212 40.1
BraA07t32051Z Brassica rapa HOM05D006908 ORTHO05D008662 3.3e-28 129.4 226 36.7
Cfa002075 Carpinus fangiana HOM05D006908 ORTHO05D008662 3.3e-28 129.4 131 54.2
Pp3c16_8290 Physcomitrium patens HOM05D006908 ORTHO05D008662 1.0e-26 124.4 243 35.8
unitig_52.g17450 Utricularia gibba HOM05D006908 ORTHO05D008662 3.4e-25 119.4 233 34.3
A07p45490 Brassica napus HOM05D006908 ORTHO05D008662 1.6e-22 110.5 281 29.9
AUR62033073 Chenopodium quinoa HOM05D006908 ORTHO05D008662 8.6e-21 104.8 215 36.7
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 2.5e-20 103.2 208 35.1
AagrBONN_evm.TU.Sc2ySwM_344.5185 Anthoceros agrestis HOM05D006908 ORTHO05D008662 5.6e-20 102.1 228 32.5
C09p24020 Brassica napus HOM05D006908 ORTHO05D008662 1.6e-19 100.5 151 39.7
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 2.1e-19 100.1 268 29.5
Cpa.g.sc41.12 Carica papaya HOM05D006908 ORTHO05D008662 4.7e-19 99.0 79 63.3
BolC9t55322H Brassica oleracea HOM05D006908 ORTHO05D008662 6.6e-13 78.6 72 55.6
AL2G41640 Arabidopsis lyrata HOM05D006908 ORTHO05D008662 4.7e-11 72.4 142 35.9
SMO347G0515 Selaginella moellendorffii HOM05D006908 ORTHO05D008662 1.1e-07 61.2 102 34.3


User provided reference genes

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