Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3326 Fragaria x ananassa HOM05D005760 ORTHO05D007113 9.9e-86 320.1 163 100.0
FAN15G1969 Fragaria x ananassa HOM05D005760 ORTHO05D007113 1.9e-76 289.3 149 98.0
FAN24G1577 Fragaria x ananassa HOM05D005760 ORTHO05D007113 1.3e-72 276.6 162 90.1
FvH4_2g11773 Fragaria vesca HOM05D005760 ORTHO05D007113 3.2e-68 261.9 151 90.7
RcHm_v2.0_Chr6g0272031 Rosa chinensis HOM05D005760 ORTHO05D007113 3.8e-53 211.8 163 71.2
Prupe.8G057200 Prunus persica HOM05D005760 ORTHO05D007113 3.5e-46 188.7 165 64.8
MD10G1047900 Malus domestica HOM05D005760 ORTHO05D007113 1.0e-45 187.2 165 63.6
MD05G1041500 Malus domestica HOM05D005760 ORTHO05D007113 1.7e-45 186.4 167 62.9
CANSAT78G0610 Cannabis sativa HOM05D005760 ORTHO05D007113 6.5e-45 184.5 161 64.6
COL.COLO4_04233 Corchorus olitorius HOM05D005760 ORTHO05D007113 1.1e-44 183.7 165 63.0
Hma1.2p1_0004F.1_g004045 Hydrangea macrophylla HOM05D005760 ORTHO05D007113 1.9e-44 183.0 169 62.7
Lj4C496G3 Lonicera japonica HOM05D005760 ORTHO05D007113 1.9e-44 183.0 164 61.0
Lj4C503G3 Lonicera japonica HOM05D005760 ORTHO05D007113 1.9e-44 183.0 164 61.0
Dinv41715 Davidia involucrata HOM05D005760 ORTHO05D007113 2.5e-44 182.6 166 63.9
Manes.18G101200 Manihot esculenta HOM05D005760 ORTHO05D007113 2.5e-44 182.6 165 63.0
TAR628G1581 Trochodendron aralioides HOM05D005760 ORTHO05D007113 2.5e-44 182.6 169 61.5
EL10Ac1g00088 Beta vulgaris HOM05D005760 ORTHO05D007113 4.2e-44 181.8 164 61.6
PSO170G3854 Papaver somniferum HOM05D005760 ORTHO05D007113 4.2e-44 181.8 167 60.5
Thecc.08G184000 Theobroma cacao HOM05D005760 ORTHO05D007113 5.5e-44 181.4 165 62.4
CSS0014231 Camellia sinensis var. sinensis HOM05D005760 ORTHO05D007113 1.2e-43 180.3 164 62.2
Cfa013846 Carpinus fangiana HOM05D005760 ORTHO05D007113 2.7e-43 179.1 163 62.6
Sc23g0001270 Simmondsia chinensis HOM05D005760 ORTHO05D007113 2.7e-43 179.1 172 60.5
Atru.chr13.1758 Acer truncatum HOM05D005760 ORTHO05D007113 3.6e-43 178.7 167 61.7
AUR62004640 Chenopodium quinoa HOM05D005760 ORTHO05D007113 3.6e-43 178.7 162 63.0
Ciclev10000028m.g Citrus clementina HOM05D005760 ORTHO05D007113 6.1e-43 177.9 169 59.8
Nn1g08372 Nelumbo nucifera HOM05D005760 ORTHO05D007113 6.1e-43 177.9 165 60.6
Phvul.007G245600 Phaseolus vulgaris HOM05D005760 ORTHO05D007113 6.1e-43 177.9 161 64.0
Glyma.02G158100 Glycine max HOM05D005760 ORTHO05D007113 1.0e-42 177.2 162 63.6
Medtr1g050670 Medicago truncatula HOM05D005760 ORTHO05D007113 1.0e-42 177.2 164 62.8
GSVIVG01034473001 Vitis vinifera HOM05D005760 ORTHO05D007113 1.0e-42 177.2 164 62.2
Nitab4.5_0000303g0150 Nicotiana tabacum HOM05D005760 ORTHO05D007113 1.4e-42 176.8 175 59.4
Peaxi162Scf00268g01128 Petunia axillaris HOM05D005760 ORTHO05D007113 1.8e-42 176.4 167 61.1
TWI34G1956 Tripterygium wilfordii HOM05D005760 ORTHO05D007113 1.8e-42 176.4 162 62.3
Duzib116G0663 Durio zibethinus HOM05D005760 ORTHO05D007113 3.0e-42 175.6 183 56.8
Hund27088 Selenicereus undatus HOM05D005760 ORTHO05D007113 3.0e-42 175.6 171 61.4
PSO782G3241 Papaver somniferum HOM05D005760 ORTHO05D007113 4.0e-42 175.3 167 58.7
Lj5g0008525 Lotus japonicus HOM05D005760 ORTHO05D007113 5.2e-42 174.9 166 63.9
Ca_11749_v3 Cicer arietinum L. HOM05D005760 ORTHO05D007113 6.8e-42 174.5 157 63.7
QL02p033685 Quercus lobata HOM05D005760 ORTHO05D007113 8.8e-42 174.1 154 64.3
Gohir.D05G253200 Gossypium hirsutum HOM05D005760 ORTHO05D007113 1.5e-41 173.3 176 56.8
Sopen06g023840 Solanum pennellii HOM05D005760 ORTHO05D007113 1.5e-41 173.3 168 60.1
Sabra19G0094600 Salix brachista HOM05D005760 ORTHO05D007113 2.0e-41 172.9 169 62.7
CAN.G199.9 Capsicum annuum HOM05D005760 ORTHO05D007113 2.6e-41 172.6 168 60.1
DCAR_001048 Daucus carota HOM05D005760 ORTHO05D007113 3.4e-41 172.2 166 59.0
Gorai.009G263800 Gossypium raimondii HOM05D005760 ORTHO05D007113 3.4e-41 172.2 176 56.8
Rhsim06G0094000 Rhododendron simsii HOM05D005760 ORTHO05D007113 3.4e-41 172.2 169 58.0
Actinidia23335 Actinidia chinensis HOM05D005760 ORTHO05D007113 4.4e-41 171.8 166 59.0
Gohir.A05G250551 Gossypium hirsutum HOM05D005760 ORTHO05D007113 4.4e-41 171.8 176 56.8
SalBow7G4130 Salvia bowleyana HOM05D005760 ORTHO05D007113 4.4e-41 171.8 172 58.7
TPR.G22709 Trifolium pratense HOM05D005760 ORTHO05D007113 5.7e-41 171.4 162 61.7
arahy.Tifrunner.gnm1.ann1.BNJ0D6 Arachis hypogaea HOM05D005760 ORTHO05D007113 7.5e-41 171.0 162 63.0
arahy.Tifrunner.gnm1.ann1.H1JXTH Arachis hypogaea HOM05D005760 ORTHO05D007113 7.5e-41 171.0 162 63.0
Psat6g094080 Pisum sativum HOM05D005760 ORTHO05D007113 7.5e-41 171.0 164 61.6
Ah.05g178160 Amaranthus hybridus HOM05D005760 ORTHO05D007113 9.7e-41 170.6 169 60.4
CsaV3_2G033490 Cucumis sativus L. HOM05D005760 ORTHO05D007113 2.2e-40 169.5 168 58.9
Aqoxy6G00127 Aquilegia oxysepala HOM05D005760 ORTHO05D007113 2.8e-40 169.1 170 58.8
CiPaw.08G058900 Carya illinoinensis HOM05D005760 ORTHO05D007113 2.8e-40 169.1 165 57.6
ClCG11G008140 Citrullus lanatus HOM05D005760 ORTHO05D007113 2.8e-40 169.1 168 58.9
Lalb_Chr03g0036141 Lupinus albus HOM05D005760 ORTHO05D007113 6.3e-40 167.9 153 64.7
PGR102G0553 Punica granatum HOM05D005760 ORTHO05D007113 6.3e-40 167.9 166 59.0
Haze_22520 Corylus avellana HOM05D005760 ORTHO05D007113 8.3e-40 167.5 182 53.3
Aa31LG6G8840 Aethionema arabicum HOM05D005760 ORTHO05D007113 3.1e-39 165.6 162 59.3
MSTRG.25441 Avicennia marina HOM05D005760 ORTHO05D007113 5.3e-39 164.9 172 55.2
Migut.C01256 Erythranthe guttata HOM05D005760 ORTHO05D007113 7.0e-39 164.5 168 55.4
CARHR034440 Cardamine hirsuta HOM05D005760 ORTHO05D007113 9.1e-39 164.1 161 59.0
Thhalv10001809m.g Eutrema salsugineum HOM05D005760 ORTHO05D007113 2.0e-38 162.9 162 58.0
unitig_0.g276 Utricularia gibba HOM05D005760 ORTHO05D007113 1.3e-37 160.2 165 55.2
Sp1g30370 Schrenkiella parvula HOM05D005760 ORTHO05D007113 1.7e-37 159.8 161 57.8
SpUn0216_0010 Schrenkiella parvula HOM05D005760 ORTHO05D007113 1.7e-37 159.8 161 57.8
Carub.0001s3325 Capsella rubella HOM05D005760 ORTHO05D007113 3.8e-37 158.7 159 57.2
AL1G50540 Arabidopsis lyrata HOM05D005760 ORTHO05D007113 3.2e-36 155.6 159 54.7
C06p06800 Brassica napus HOM05D005760 ORTHO05D007113 7.2e-36 154.5 157 54.8
C06p06840 Brassica napus HOM05D005760 ORTHO05D007113 7.2e-36 154.5 157 54.8
AT1G35660 Arabidopsis thaliana HOM05D005760 ORTHO05D007113 1.2e-35 153.7 159 56.0
THA.LOC104806788 Tarenaya hassleriana HOM05D005760 ORTHO05D007113 2.1e-35 152.9 155 58.7
BcaC08g43328 Brassica carinata HOM05D005760 ORTHO05D007113 4.7e-35 151.8 157 54.8
BolC6t35790H Brassica oleracea HOM05D005760 ORTHO05D007113 4.7e-35 151.8 157 54.8
BcaB07g33624 Brassica carinata HOM05D005760 ORTHO05D007113 8.0e-35 151.0 157 53.5
A06p02320 Brassica napus HOM05D005760 ORTHO05D007113 1.8e-34 149.8 157 52.9
BraA06t23439Z Brassica rapa HOM05D005760 ORTHO05D007113 1.8e-34 149.8 157 52.9
Lsat_1_v5_gn_1_10440 Lactuca sativa HOM05D005760 ORTHO05D007113 2.3e-34 149.4 170 54.1
HanXRQChr04g0107521 Helianthus annuus HOM05D005760 ORTHO05D007113 6.8e-34 147.9 170 54.1
MELO3C008121.2 Cucumis melo HOM05D005760 ORTHO05D007113 9.8e-33 144.1 151 57.6
vmacro12489 Vaccinium macrocarpon HOM05D005760 ORTHO05D007113 1.7e-32 143.3 232 41.8
SEGI_16135 Sequoiadendron giganteum HOM05D005760 ORTHO05D007113 4.8e-32 141.7 154 51.9
ECA152G0004 Erigeron canadensis HOM05D005760 ORTHO05D007113 3.1e-31 139.0 177 49.7
Pp3c15_6360 Physcomitrium patens HOM05D005760 ORTHO05D007113 7.0e-31 137.9 162 47.5
Pp3c15_6380 Physcomitrium patens HOM05D005760 ORTHO05D007113 7.0e-31 137.9 162 47.5
Zm00001eb146280 Zea mays HOM05D005760 ORTHO05D007113 7.0e-31 137.9 160 53.8
Os01g0873800 Oryza sativa ssp. japonica HOM05D005760 ORTHO05D007113 2.0e-30 136.3 159 50.3
Mapoly0036s0148 Marchantia polymorpha HOM05D005760 ORTHO05D007113 4.7e-27 125.2 168 43.5
CBR_g40969 Chara braunii HOM05D005760 ORTHO05D007113 3.0e-26 122.5 155 50.3
AagrBONN_evm.TU.Sc2ySwM_117.2253 Anthoceros agrestis HOM05D005760 ORTHO05D007113 6.3e-24 114.8 151 43.0
AUR62022696 Chenopodium quinoa HOM05D005760 ORTHO05D007113 1.8e-23 113.2 162 47.5
SGA_v2.0_scaffold118G32485 Striga asiatica HOM05D005760 ORTHO05D007113 3.5e-22 109.0 103 58.3
Oeu000547.3 Olea europaea HOM05D005760 ORTHO05D007113 2.1e-19 99.8 60 78.3
Cc10_g10700 Coffea canephora HOM05D005760 ORTHO05D007113 2.8e-19 99.4 59 79.7
Hma1.2p1_0004F.1_g004040 Hydrangea macrophylla HOM05D005760 ORTHO05D007113 2.8e-19 99.4 79 68.4
SHI09012 Sapria himalayana HOM05D005760 ORTHO05D007113 6.8e-18 94.7 60 78.3
SEGI_03904 Sequoiadendron giganteum HOM05D005760 ORTHO05D007113 1.5e-17 93.6 58 75.9
ATR0003G012 Amborella trichopoda HOM05D005760 ORTHO05D007113 3.4e-17 92.4 58 74.1
CDE08G1571 Ceratophyllum demersum HOM05D005760 ORTHO05D007113 5.8e-17 91.7 73 58.9
VMungo0720G0756 Vigna mungo HOM05D005760 ORTHO05D007113 9.8e-17 90.9 72 69.4
Cc10_g10690 Coffea canephora HOM05D005760 ORTHO05D007113 1.7e-16 90.1 79 62.0
CDE08G0048 Ceratophyllum demersum HOM05D005760 ORTHO05D007113 7.0e-15 84.7 73 60.3
Cpa.g.sc66.38 Carica papaya HOM05D005760 ORTHO05D007113 2.0e-14 83.2 52 73.1
ATR0003G024 Amborella trichopoda HOM05D005760 ORTHO05D007113 1.2e-11 73.9 71 50.7
SEGI_08751 Sequoiadendron giganteum HOM05D005760 ORTHO05D007113 2.0e-09 66.6 70 48.6
SHI09014 Sapria himalayana HOM05D005760 ORTHO05D007113 1.9e-07 60.1 42 66.7
Carub.0001s0936 Capsella rubella HOM05D005760 ORTHO05D007113 1.2e-06 57.4 40 67.5


User provided reference genes

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