Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3253 Fragaria x ananassa HOM05D000003 ORTHO05D000006 1.5e-76 289.3 132 100.0
FvH4_6g19251 Fragaria vesca HOM05D000003 ORTHO05D000004 6.9e-21 104.4 125 41.6
FvH4_2g28261 Fragaria vesca HOM05D000003 ORTHO05D000006 1.1e-18 97.1 93 45.2
FvH4_2g01463 Fragaria vesca HOM05D000003 ORTHO05D000006 9.4e-18 94.0 93 45.2
FvH4_7g09171 Fragaria vesca HOM05D000003 ORTHO05D002568 9.4e-18 94.0 94 43.6
FvH4_2g05110 Fragaria vesca HOM05D000003 ORTHO05D022586 1.7e-14 83.2 94 40.4
FvH4_3g37471 Fragaria vesca HOM05D000003 ORTHO05D000006 5.0e-11 71.6 156 32.7
FvH4_6g12302 Fragaria vesca HOM05D000003 ORTHO05D000004 8.5e-11 70.9 132 31.8
FvH4_3g29411 Fragaria vesca HOM05D000003 ORTHO05D000006 1.5e-10 70.1 88 36.4
FvH4_6g17021 Fragaria vesca HOM05D000003 ORTHO05D000006 8.0e-09 64.3 140 28.6
RcHm_v2.0_Chr2g0136131 Rosa chinensis HOM05D000003 ORTHO05D000006 1.0e-08 63.9 86 38.4
FvH4_2g09182 Fragaria vesca HOM05D000003 ORTHO05D045492 2.3e-08 62.8 112 36.6
FvH4_6g16683 Fragaria vesca HOM05D000003 ORTHO05D000004 4.0e-08 62.0 82 37.8
SGA_v2.0_scaffold255G45341 Striga asiatica HOM05D000003 ORTHO05D000006 4.0e-08 62.0 87 34.5
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 6.7e-08 61.2 94 36.2
COL.COLO4_19781 Corchorus olitorius HOM05D000003 ORTHO05D000006 1.5e-07 60.1 79 36.7
FvH4_4g18821 Fragaria vesca HOM05D000003 ORTHO05D000006 1.5e-07 60.1 82 35.4
RhsimUnG0053200 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.0e-07 59.7 87 33.3
FvH4_6g40361 Fragaria vesca HOM05D000003 ORTHO05D000006 3.3e-07 58.9 86 33.7
TPR.G11081 Trifolium pratense HOM05D000024 ORTHO05D000006 4.4e-07 58.5 119 31.9
Ah.10g031070 Amaranthus hybridus HOM05D000003 ORTHO05D000006 5.7e-07 58.2 75 36.0
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 5.7e-07 58.2 90 33.3
Aqoxy7G02362 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.5e-07 57.8 74 37.8
TWI38G0206 Tripterygium wilfordii HOM05D000003 ORTHO05D000006 7.5e-07 57.8 82 30.5
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 9.7e-07 57.4 70 37.1
Rhsim07G0162700 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.7e-07 57.4 81 33.3
BcaC06g36253 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-06 57.0 77 35.1
CANSAT80G2477 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-06 57.0 89 31.5
Aqoxy1G02858 Aquilegia oxysepala HOM05D000024 ORTHO05D000006 1.7e-06 56.6 78 32.1
TWI23G1168 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.7e-06 56.6 83 34.9
EL10Ac4g09509 Beta vulgaris HOM05D000060 ORTHO05D004147 2.2e-06 56.2 74 37.8
PGR092G0007 Punica granatum HOM05D000003 ORTHO05D000006 2.2e-06 56.2 69 40.6
Aqoxy3G01336 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.8e-06 55.8 83 31.3
MBI08_g12702_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 2.8e-06 55.8 86 32.6
FvH4_1g26331 Fragaria vesca HOM05D000003 ORTHO05D000006 3.7e-06 55.5 86 31.4
FvH4_4g06792 Fragaria vesca HOM05D000003 ORTHO05D000006 3.7e-06 55.5 74 33.8
FvH4_6g23332 Fragaria vesca HOM05D000003 ORTHO05D000006 3.7e-06 55.5 34 58.8
PSO478G2249 Papaver somniferum HOM05D000003 ORTHO05D000006 3.7e-06 55.5 73 38.4
Aa31LG8G11140 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.8e-06 55.1 112 28.6
PSO210G0341 Papaver somniferum HOM05D000003 ORTHO05D000006 4.8e-06 55.1 68 41.2
SHI42562 Sapria himalayana HOM05D000003 ORTHO05D000004 4.8e-06 55.1 101 32.7
vmacro08045 Vaccinium macrocarpon HOM05D002944 ORTHO05D003377 4.8e-06 55.1 88 33.0
FvH4_4g14101 Fragaria vesca HOM05D000003 ORTHO05D000006 6.3e-06 54.7 40 57.5
QL05p073923 Quercus lobata HOM05D000003 ORTHO05D000006 6.3e-06 54.7 87 34.5
TAR019G0007 Trochodendron aralioides HOM05D000024 ORTHO05D000006 6.3e-06 54.7 82 30.5


User provided reference genes

Program Settings