Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.1e-136 490.0 238 100.0
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 4.0e-128 461.5 234 94.4
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 6.0e-116 421.0 240 87.5
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 9.0e-112 407.1 237 85.7
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 9.0e-112 407.1 237 85.7
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 2.0e-95 352.8 239 76.6
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 4.4e-90 335.1 239 72.8
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 3.5e-87 325.5 244 68.4
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 1.2e-84 317.0 244 67.2
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 1.1e-80 303.9 239 65.3
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 4.1e-80 302.0 244 62.7
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 4.5e-79 298.5 260 61.5
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 4.5e-79 298.5 236 64.0
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 4.5e-79 298.5 248 61.3
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 1.3e-78 297.0 266 59.4
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.3e-78 297.0 259 61.4
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 1.3e-78 297.0 240 64.2
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 1.9e-77 293.1 242 62.4
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 3.2e-77 292.4 235 63.0
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 5.5e-77 291.6 235 63.4
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.2e-76 290.4 235 62.6
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 6.1e-76 288.1 245 60.4
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 2.3e-75 286.2 237 61.6
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 6.8e-75 284.6 239 63.2
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 2.6e-74 282.7 249 58.6
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 5.7e-74 281.6 239 61.9
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 7.5e-74 281.2 235 60.9
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 9.8e-74 280.8 238 58.8
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 9.8e-74 280.8 236 61.4
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 2.2e-73 279.6 247 61.5
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 2.8e-73 279.3 240 59.6
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 6.3e-73 278.1 245 60.4
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.1e-72 277.3 242 57.4
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.6e-71 273.5 251 58.6
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 2.7e-71 272.7 218 62.8
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 1.7e-70 270.0 257 58.0
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 5.0e-70 268.5 226 58.4
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 9.5e-69 264.2 233 57.5
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 1.6e-68 263.5 241 58.9
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 1.6e-68 263.5 252 57.5
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 3.6e-68 262.3 247 55.9
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 3.6e-68 262.3 246 56.5
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 6.1e-68 261.5 245 56.3
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 1.8e-67 260.0 258 54.3
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 8.9e-67 257.7 240 55.8
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 1.5e-66 256.9 240 57.9
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 4.4e-66 255.4 247 57.1
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 7.5e-66 254.6 241 55.2
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 9.8e-66 254.2 244 55.7
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 2.2e-65 253.1 247 53.4
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 6.3e-65 251.5 238 56.7
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 1.1e-64 250.8 249 55.4
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 1.1e-64 250.8 245 55.1
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 1.1e-64 250.8 240 56.2
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 1.8e-64 250.0 249 55.4
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 1.8e-64 250.0 190 63.7
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 2.4e-64 249.6 248 56.5
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 7.0e-64 248.1 244 54.9
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 3.5e-63 245.7 236 55.5
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 2.3e-62 243.0 172 65.1
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 2.9e-62 242.7 239 55.2
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 3.8e-62 242.3 246 54.1
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 1.1e-61 240.7 235 53.2
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 1.5e-61 240.4 249 51.0
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.9e-61 240.0 237 54.4
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 1.9e-61 240.0 240 52.1
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 3.3e-61 239.2 174 64.9
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 5.6e-61 238.4 235 54.5
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 9.5e-61 237.7 137 75.9
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 1.6e-60 236.9 142 75.4
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 3.6e-60 235.7 247 52.2
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 4.7e-60 235.3 142 74.6
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 4.0e-59 232.3 250 50.0
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 4.0e-59 232.3 244 48.0
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 4.0e-59 232.3 236 50.8
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 8.9e-59 231.1 243 51.4
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 1.5e-58 230.3 242 49.6
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 1.5e-58 230.3 246 50.0
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 2.0e-58 229.9 239 50.6
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 2.0e-58 229.9 244 50.4
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 2.6e-58 229.6 240 51.2
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 1.3e-57 227.3 241 49.8
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 1.7e-57 226.9 239 49.4
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 2.2e-57 226.5 244 50.0
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 2.9e-57 226.1 242 49.6
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 2.9e-57 226.1 242 49.6
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 3.7e-57 225.7 247 51.8
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 3.7e-57 225.7 234 50.9
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 4.9e-57 225.3 133 78.2
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 6.4e-57 224.9 241 50.6
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 2.7e-55 219.5 266 46.6
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 4.3e-53 212.2 117 77.8
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 3.1e-51 206.1 120 75.8
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 3.7e-49 199.1 229 46.3
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 7.0e-48 194.9 110 79.1
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 4.0e-43 179.1 115 69.6
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 1.4e-40 170.6 143 54.5
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 1.6e-39 167.2 165 49.7
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 1.6e-39 167.2 129 56.6
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 6.6e-38 161.8 193 44.6
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 4.7e-36 155.6 131 49.6
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 6.2e-36 155.2 90 77.8
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.7e-33 147.1 114 62.3
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 1.0e-30 137.9 135 54.1
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 1.7e-30 137.1 124 57.3
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 3.6e-28 129.4 151 42.4
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 9.3e-24 114.8 235 33.2
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 4.3e-21 105.9 132 50.0
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 1.3e-12 77.8 45 71.1
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 1.2e-07 61.2 143 37.1
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 1.6e-07 60.8 143 37.1
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 2.7e-07 60.1 83 36.1


User provided reference genes

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