Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.5e-288 993.8 478 100.0
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 5.2e-284 980.3 478 98.7
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 5.7e-283 976.9 478 98.3
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.2e-282 974.9 478 98.1
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 3.7e-282 974.2 478 97.9
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.9e-279 964.1 478 97.5
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 2.3e-276 954.9 478 95.4
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 2.8e-253 878.2 482 86.3
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 5.8e-251 870.5 480 86.9
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 3.2e-241 838.2 486 81.9
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 7.1e-241 837.0 488 80.9
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 3.9e-239 831.2 479 82.0
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 8.7e-239 830.1 495 79.2
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 8.7e-239 830.1 484 81.4
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 2.5e-238 828.6 495 79.0
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 2.8e-237 825.1 479 81.2
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 6.9e-236 820.5 484 79.8
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 1.5e-235 819.3 487 79.7
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 2.6e-235 818.5 486 80.0
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 5.8e-235 817.4 487 79.7
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 5.8e-235 817.4 484 80.0
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 7.6e-235 817.0 487 80.1
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 1.7e-234 815.8 484 78.9
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 3.8e-234 814.7 484 78.7
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 5.4e-233 810.8 482 79.3
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 5.4e-233 810.8 482 79.5
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 9.3e-233 810.1 478 80.1
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 1.2e-232 809.7 488 78.9
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 2.1e-232 808.9 478 79.7
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 2.7e-232 808.5 485 79.0
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 4.6e-232 807.7 483 77.6
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 1.0e-231 806.6 483 78.9
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.8e-231 805.8 487 79.3
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 3.0e-231 805.1 478 79.1
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 3.9e-231 804.7 478 79.7
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 3.9e-231 804.7 491 77.8
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 3.9e-231 804.7 509 76.4
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 8.7e-231 803.5 487 79.1
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.1e-230 803.1 485 79.0
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 1.1e-230 803.1 484 79.1
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.5e-230 802.7 484 78.7
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 2.5e-230 802.0 484 79.5
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 7.4e-230 800.4 491 77.8
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 1.6e-229 799.3 479 78.9
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 1.6e-229 799.3 520 74.4
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 2.8e-229 798.5 484 78.5
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 2.8e-229 798.5 574 68.8
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 2.8e-229 798.5 491 76.6
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.4e-228 796.2 498 76.7
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 4.0e-228 794.7 479 76.8
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 4.5e-227 791.2 480 77.9
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 5.8e-227 790.8 481 76.7
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 1.7e-226 789.3 481 77.1
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 2.9e-226 788.5 483 77.6
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 8.4e-226 786.9 478 77.0
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 2.5e-225 785.4 472 79.4
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 5.5e-225 784.3 478 76.4
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 1.0e-223 780.0 478 77.4
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 3.0e-223 778.5 483 75.8
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 5.1e-223 777.7 491 76.0
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 1.1e-222 776.5 491 74.9
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 3.3e-222 775.0 483 76.2
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 9.6e-222 773.5 480 76.2
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 2.1e-221 772.3 474 76.8
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 8.2e-221 770.4 485 74.6
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.4e-220 769.6 461 78.7
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 1.8e-220 769.2 488 74.8
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 4.1e-220 768.1 572 66.1
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.3e-220 767.7 471 76.6
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 5.3e-220 767.7 483 74.3
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 2.9e-218 761.9 479 75.2
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 3.8e-218 761.5 479 75.6
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 2.5e-217 758.8 485 75.3
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 2.5e-217 758.8 479 74.3
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 3.2e-217 758.4 479 75.2
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 1.2e-216 756.5 480 75.2
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 1.6e-216 756.1 479 75.2
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 7.9e-216 753.8 487 73.7
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 2.3e-215 752.3 562 66.5
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 2.3e-215 752.3 479 73.1
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 1.1e-214 750.0 478 73.8
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 1.1e-214 750.0 478 73.8
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 1.9e-214 749.2 480 74.4
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 1.9e-214 749.2 478 74.7
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 3.3e-214 748.4 478 73.2
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 3.3e-214 748.4 478 73.2
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 3.3e-214 748.4 479 73.3
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 7.4e-214 747.3 479 73.5
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 2.2e-213 745.7 478 73.0
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 2.8e-213 745.3 480 74.4
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 8.2e-213 743.8 488 72.3
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 1.8e-212 742.7 480 73.5
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 1.5e-211 739.6 479 72.9
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 8.5e-210 733.8 503 70.0
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 1.6e-208 729.6 411 82.7
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 1.6e-208 729.6 411 83.7
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 7.4e-206 720.7 478 73.0
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 2.2e-205 719.2 482 70.7
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 5.5e-201 704.5 540 64.4
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 6.7e-199 697.6 487 69.0
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.0e-198 696.0 567 61.4
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 2.6e-198 695.7 503 68.0
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 7.4e-198 694.1 478 69.5
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 1.5e-195 686.4 592 58.8
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.5e-190 669.8 446 73.1
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.2e-187 660.2 427 73.1
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.0e-186 657.1 327 97.6
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 5.5e-185 651.4 374 81.3
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 1.0e-183 647.1 411 74.0
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 2.3e-183 646.0 482 64.5
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 2.9e-178 629.0 493 60.9
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 5.0e-178 628.2 484 63.0
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 7.2e-177 624.4 360 81.1
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 5.0e-170 601.7 373 74.3
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 2.8e-168 595.9 373 73.7
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 4.9e-165 585.1 342 80.7
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.1e-164 583.9 327 84.1
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 1.9e-161 573.2 327 82.0
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 1.0e-159 567.4 530 54.0
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 8.3e-149 531.2 334 76.3
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 2.4e-148 529.6 325 77.2
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 3.2e-148 529.3 328 76.5
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 5.6e-145 518.5 417 63.5
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 2.8e-144 516.2 361 69.5
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.9e-137 493.4 296 76.7
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 3.2e-132 476.1 328 71.3
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.9e-106 389.4 222 79.3
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 1.2e-102 377.9 447 43.8
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 2.2e-101 373.6 394 49.2
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.5e-94 350.9 211 80.6
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 5.7e-89 332.4 430 42.6
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 2.2e-88 330.5 226 69.0
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.8e-80 303.5 187 79.7
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 9.1e-79 298.5 159 84.9
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 9.1e-79 298.5 159 84.9
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.2e-76 289.7 159 83.6
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 2.5e-68 263.8 145 81.4
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 1.3e-56 224.9 419 34.1
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.8e-47 194.5 106 84.0
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.9e-46 189.5 106 81.1
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.6e-44 183.0 94 90.4
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.6e-43 181.4 93 90.3
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 9.2e-39 165.6 119 68.9
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 1.5e-36 158.3 137 55.5
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 3.3e-36 157.1 91 78.0
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 7.1e-23 112.8 75 73.3
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 7.8e-22 109.4 67 73.1
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.1e-19 101.3 70 68.6
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.8e-18 98.2 65 64.6
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 1.3e-16 92.0 87 52.9
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 1.9e-15 88.2 69 65.2
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 5.1e-13 80.1 122 41.0
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 4.9e-08 63.5 130 35.4


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