Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3141 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.8e-157 558.1 283 100.0
FAN09G1480 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-132 476.1 245 98.4
FAN05G1596 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.2e-132 474.9 245 98.0
FvH4_6g08300 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-131 473.0 245 98.0
FAN14G3017 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-131 473.0 245 98.0
RcHm_v2.0_Chr3g0458171 Rosa chinensis HOM05D002400 ORTHO05D002568 1.1e-92 344.0 268 67.2
FAN09G3087 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-46 191.0 131 73.3
FAN05G1294 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-41 174.1 117 76.9
Prupe.7G108600 Prunus persica HOM05D002400 ORTHO05D002568 7.9e-38 161.8 241 43.6
MD14G1024100 Malus domestica HOM05D002400 ORTHO05D002568 1.1e-34 151.4 234 40.2
FAN18G4571 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.6e-33 146.7 237 40.9
FvH4_6g19020 Fragaria vesca HOM05D002400 ORTHO05D002568 5.8e-33 145.6 237 38.0
RcHm_v2.0_Chr7g0205961 Rosa chinensis HOM05D002400 ORTHO05D002568 5.8e-33 145.6 238 40.3
FvH4_5g20530 Fragaria vesca HOM05D002400 ORTHO05D002568 7.6e-33 145.2 237 40.5
RcHm_v2.0_Chr3g0475391 Rosa chinensis HOM05D002400 ORTHO05D002568 1.9e-31 140.6 216 40.7
FAN02G4410 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.4e-31 140.2 237 37.6
MD04G1058800 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-30 137.9 236 39.4
FvH4_6g18911 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-30 137.5 261 39.1
RcHm_v2.0_Chr7g0205891 Rosa chinensis HOM05D002400 ORTHO05D002568 6.0e-30 135.6 237 39.2
FAN05G4159 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-29 134.0 253 36.0
FAN05G2917 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.1e-29 132.5 269 36.8
FAN09G1471 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.7e-29 132.1 237 37.6
RcHm_v2.0_Chr3g0474001 Rosa chinensis HOM05D002400 ORTHO05D002568 6.7e-29 132.1 222 37.8
MD14G1026600 Malus domestica HOM05D002400 ORTHO05D002568 1.5e-28 131.0 233 37.3
RcHm_v2.0_Chr3g0474091 Rosa chinensis HOM05D002400 ORTHO05D002568 1.9e-28 130.6 256 34.4
FvH4_6g18920 Fragaria vesca HOM05D002400 ORTHO05D002568 9.6e-28 128.3 229 37.6
FvH4_6g19030 Fragaria vesca HOM05D002400 ORTHO05D002568 2.8e-27 126.7 239 34.3
FAN14G2096 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.8e-27 125.9 268 32.1
RcHm_v2.0_Chr3g0473911 Rosa chinensis HOM05D002400 ORTHO05D002568 4.8e-27 125.9 244 38.1
Prupe.2G052100 Prunus persica HOM05D002400 ORTHO05D002568 6.2e-27 125.6 245 38.4
RcHm_v2.0_Chr3g0474031 Rosa chinensis HOM05D002400 ORTHO05D002568 1.8e-26 124.0 246 32.5
FAN14G4887 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.4e-26 123.6 222 37.4
FvH4_5g26410 Fragaria vesca HOM05D002400 ORTHO05D002568 4.0e-26 122.9 256 33.2
FAN18G2424 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.0e-26 122.9 256 33.2
MD14G1025400 Malus domestica HOM05D002400 ORTHO05D002568 5.3e-26 122.5 260 35.0
MD14G1026300 Malus domestica HOM05D002400 ORTHO05D002568 5.3e-26 122.5 233 35.2
MD12G1202000 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-25 121.3 224 40.6
MD14G1025800 Malus domestica HOM05D002400 ORTHO05D002568 2.0e-25 120.6 256 34.4
MD14G1026400 Malus domestica HOM05D002400 ORTHO05D002568 2.6e-25 120.2 208 38.0
Prupe.1G551800 Prunus persica HOM05D002400 ORTHO05D002568 4.5e-25 119.4 260 36.5
RcHm_v2.0_Chr5g0069001 Rosa chinensis HOM05D002400 ORTHO05D002568 5.8e-25 119.0 308 31.8
FAN08G1360 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.0e-24 118.2 250 37.2
FAN09G2665 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.0e-24 118.2 211 36.5
MD14G1025300 Malus domestica HOM05D002400 ORTHO05D002568 1.0e-24 118.2 240 37.5
FvH4_6g19010 Fragaria vesca HOM05D002400 ORTHO05D002568 1.3e-24 117.9 211 37.4
FAN14G3084 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-24 117.9 211 37.4
FvH4_7g04740 Fragaria vesca HOM05D002400 ORTHO05D002568 2.2e-24 117.1 233 37.8
FAN06G1414 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.9e-24 116.7 233 37.8
FAN18G1895 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.9e-24 116.7 227 36.6
FAN03G0307 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.5e-24 115.5 238 37.4
Prupe.6G269600 Prunus persica HOM05D002400 ORTHO05D002568 6.5e-24 115.5 211 40.8
RcHm_v2.0_Chr1g0330111 Rosa chinensis HOM05D002400 ORTHO05D002568 6.5e-24 115.5 217 36.4
RcHm_v2.0_Chr3g0474171 Rosa chinensis HOM05D002400 ORTHO05D002568 6.5e-24 115.5 247 34.0
vmacro05682 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 6.5e-24 115.5 237 35.0
Prupe.7G106400 Prunus persica HOM05D002400 ORTHO05D002568 8.4e-24 115.2 268 32.8
MD12G1025400 Malus domestica HOM05D002400 ORTHO05D002568 1.1e-23 114.8 208 39.9
RcHm_v2.0_Chr3g0475381 Rosa chinensis HOM05D002400 ORTHO05D002568 1.1e-23 114.8 243 33.7
FAN05G4425 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.4e-23 114.4 211 36.0
FAN09G4054 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.5e-23 113.6 226 35.8
MD00G1221800 Malus domestica HOM05D002400 ORTHO05D002568 5.5e-23 112.5 231 33.8
MD14G1026000 Malus domestica HOM05D002400 ORTHO05D002568 5.5e-23 112.5 236 33.5
RcHm_v2.0_Chr5g0068981 Rosa chinensis HOM05D002400 ORTHO05D002568 5.5e-23 112.5 276 32.2
vmacro12123 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 5.5e-23 112.5 216 37.5
FAN06G4070 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-22 111.3 235 37.4
MD14G1024900 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-22 111.3 211 35.5
MD14G1025100 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-22 111.3 236 33.1
FvH4_1g23521 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-22 110.9 234 32.9
RcHm_v2.0_Chr3g0474041 Rosa chinensis HOM05D002400 ORTHO05D002568 1.6e-22 110.9 206 36.9
FAN13G3133 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.0e-22 109.0 197 37.6
FAN14G3389 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.9e-22 108.6 223 35.0
FAN02G2106 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.0e-21 108.2 211 35.1
FvH4_6g18950 Fragaria vesca HOM05D002400 ORTHO05D002568 1.3e-21 107.8 223 34.5
FvH4_6g05280 Fragaria vesca HOM05D002400 ORTHO05D002568 1.8e-21 107.5 223 35.0
FvH4_6g33960 Fragaria vesca HOM05D002400 ORTHO05D002568 1.8e-21 107.5 260 33.5
FAN18G0208 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-21 107.5 233 34.8
MD04G1145500 Malus domestica HOM05D002400 ORTHO05D002568 1.8e-21 107.5 265 34.0
MD14G1025600 Malus domestica HOM05D002400 ORTHO05D002568 1.8e-21 107.5 211 33.6
RcHm_v2.0_Chr3g0473961 Rosa chinensis HOM05D002400 ORTHO05D002568 2.3e-21 107.1 255 35.3
FAN14G5637 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.0e-21 106.7 223 34.5
FvH4_5g32301 Fragaria vesca HOM05D002400 ORTHO05D002568 8.7e-21 105.1 235 34.5
FvH4_6g22710 Fragaria vesca HOM05D002400 ORTHO05D002568 1.1e-20 104.8 221 33.9
FvH4_7g12363 Fragaria vesca HOM05D002400 ORTHO05D002568 1.1e-20 104.8 223 34.5
FAN05G2337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-20 104.8 222 33.8
FAN06G0647 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-20 104.8 223 34.5
FAN08G0492 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-20 104.8 216 36.6
FAN14G2794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-20 104.8 222 35.6
MD12G1201900 Malus domestica HOM05D002400 ORTHO05D002568 2.5e-20 103.6 245 33.1
FAN05G1326 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.3e-20 103.2 222 34.2
FvH4_6g18954 Fragaria vesca HOM05D002400 ORTHO05D002568 5.7e-20 102.4 126 46.0
FAN09G3427 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.4e-20 102.1 221 33.5
FvH4_6g33902 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-19 100.9 228 31.6
FAN18G0377 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-19 100.9 179 37.4
MD14G1025200 Malus domestica HOM05D002400 ORTHO05D002568 2.2e-19 100.5 213 34.7
RcHm_v2.0_Chr3g0474111 Rosa chinensis HOM05D002400 ORTHO05D002568 2.2e-19 100.5 238 29.8
MD14G1026700 Malus domestica HOM05D002400 ORTHO05D002568 2.8e-19 100.1 273 32.6
FAN14G5260 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.8e-19 99.4 223 33.2
FAN06G2837 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-18 98.2 223 33.6
FvH4_5g26390 Fragaria vesca HOM05D002400 ORTHO05D002568 2.4e-18 97.1 192 34.4
FAN05G0221 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.4e-18 97.1 210 34.3
FvH4_6g18982 Fragaria vesca HOM05D002400 ORTHO05D002568 3.1e-18 96.7 167 38.9
MD12G1217800 Malus domestica HOM05D002400 ORTHO05D002568 3.1e-18 96.7 212 34.4
MD12G1026800 Malus domestica HOM05D002400 ORTHO05D002568 5.3e-18 95.9 209 34.0
FvH4_6g19040 Fragaria vesca HOM05D002400 ORTHO05D002568 9.0e-18 95.1 236 31.4
FAN04G1411 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.0e-18 95.1 217 33.2
Prupe.7G105000 Prunus persica HOM05D002400 ORTHO05D002568 1.5e-17 94.4 135 42.2
FAN26G2620 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.0e-17 94.0 231 31.6
FAN14G5794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.6e-17 93.6 240 30.8
MD12G1217700 Malus domestica HOM05D002400 ORTHO05D002568 2.6e-17 93.6 210 32.9
RcHm_v2.0_Chr3g0481121 Rosa chinensis HOM05D002400 ORTHO05D002568 4.5e-17 92.8 218 33.0
vmacro12117 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 4.5e-17 92.8 306 29.1
FvH4_6g19090 Fragaria vesca HOM05D002400 ORTHO05D002568 1.4e-15 87.8 239 28.5
Prupe.7G105500 Prunus persica HOM05D002400 ORTHO05D002568 2.5e-15 87.0 105 40.0
Prupe.7G105900 Prunus persica HOM05D002400 ORTHO05D002568 2.5e-15 87.0 105 41.0
FAN10G1459 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-14 84.7 212 34.0
MD15G1012200 Malus domestica HOM05D002400 ORTHO05D002568 1.6e-14 84.3 215 30.2
FvH4_5g20611 Fragaria vesca HOM05D002400 ORTHO05D002568 2.7e-14 83.6 169 38.5
RcHm_v2.0_Chr3g0474021 Rosa chinensis HOM05D002400 ORTHO05D002568 3.6e-14 83.2 115 39.1
FAN14G4031 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.1e-14 82.4 196 29.6
FAN04G0973 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.0e-13 81.6 137 39.4
MD14G1157200 Malus domestica HOM05D002400 ORTHO05D002568 3.0e-13 80.1 246 29.7
FvH4_6g19051 Fragaria vesca HOM05D002400 ORTHO05D002568 5.1e-13 79.3 205 30.2
FAN04G1392 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.1e-13 79.3 218 30.7
FAN09G4576 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.7e-13 79.0 163 33.7
RcHm_v2.0_Chr3g0474191 Rosa chinensis HOM05D002400 ORTHO05D002568 6.7e-13 79.0 239 28.0
FvH4_5g29160 Fragaria vesca HOM05D002400 ORTHO05D002568 8.8e-13 78.6 217 31.8
vmacro05683 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 8.8e-13 78.6 167 34.1
Cfa005421 Carpinus fangiana HOM05D002400 ORTHO05D002568 1.5e-12 77.8 218 28.4
FAN18G0337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.0e-12 77.4 217 31.3
RcHm_v2.0_Chr3g0474141 Rosa chinensis HOM05D002400 ORTHO05D002568 2.5e-12 77.0 265 29.8
RcHm_v2.0_Chr7g0217271 Rosa chinensis HOM05D002400 ORTHO05D002568 2.5e-12 77.0 92 43.5
FvH4_6g33920 Fragaria vesca HOM05D002400 ORTHO05D002568 3.3e-12 76.6 152 32.2
FAN14G5626 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.3e-12 76.6 152 32.2
Haze_16779 Corylus avellana HOM05D002400 ORTHO05D002568 4.3e-12 76.3 214 30.4
Cfa005419 Carpinus fangiana HOM05D002400 ORTHO05D002568 7.4e-12 75.5 244 26.6
RcHm_v2.0_Chr3g0474131 Rosa chinensis HOM05D002400 ORTHO05D002568 7.4e-12 75.5 231 28.1
Haze_04784 Corylus avellana HOM05D002400 ORTHO05D002568 3.7e-11 73.2 227 28.6
FvH4_5g31730 Fragaria vesca HOM05D002400 ORTHO05D002568 4.8e-11 72.8 203 31.0
Prupe.6G311500 Prunus persica HOM05D002400 ORTHO05D002568 4.8e-11 72.8 141 37.6
FvH4_6g19370 Fragaria vesca HOM05D002400 ORTHO05D002568 8.2e-11 72.0 192 31.8
MD12G1026500 Malus domestica HOM05D002400 ORTHO05D002568 8.2e-11 72.0 115 34.8
FvH4_6g18952 Fragaria vesca HOM05D002400 ORTHO05D002568 1.4e-10 71.2 113 37.2
QL02p059625 Quercus lobata HOM05D002400 ORTHO05D002568 1.4e-10 71.2 211 30.8
FAN14G5775 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-10 70.9 192 31.2
Haze_04775 Corylus avellana HOM05D002400 ORTHO05D002568 4.1e-10 69.7 215 27.4
TWI81G0137 Tripterygium wilfordii HOM05D002400 ORTHO05D002568 4.1e-10 69.7 220 29.1
FvH4_1g16170 Fragaria vesca HOM05D002400 ORTHO05D002568 6.9e-10 68.9 112 37.5
Cfa005420 Carpinus fangiana HOM05D002400 ORTHO05D002568 1.2e-09 68.2 231 26.8
FAN04G0043 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-09 68.2 118 39.8
Prupe.7G104800 Prunus persica HOM05D002400 ORTHO05D002568 1.5e-09 67.8 242 29.3
Dinv05457 Davidia involucrata HOM05D002400 ORTHO05D002568 2.0e-09 67.4 199 29.6
Duzib132G1153 Durio zibethinus HOM05D002400 ORTHO05D002568 2.0e-09 67.4 230 30.0
TWI60G1609 Tripterygium wilfordii HOM05D002400 ORTHO05D002568 3.4e-09 66.6 252 30.6
FAN05G2957 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.5e-09 66.2 71 49.3
FAN19G0785 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.5e-09 66.2 180 31.1
FAN02G0807 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.0e-08 65.1 142 32.4
FAN19G0352 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-08 64.7 230 25.2
RcHm_v2.0_Chr3g0474161 Rosa chinensis HOM05D002400 ORTHO05D002568 1.3e-08 64.7 82 39.0
FAN06G5021 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.2e-08 63.9 108 37.0
MD04G1145900 Malus domestica HOM05D002400 ORTHO05D002568 2.2e-08 63.9 99 39.4
Prupe.5G196300 Prunus persica HOM05D002400 ORTHO05D002568 2.9e-08 63.5 88 40.9
Dinv02731 Davidia involucrata HOM05D002400 ORTHO05D002568 3.8e-08 63.2 218 26.6
FAN18G0503 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.1e-07 61.6 77 40.3
Prupe.7G106200 Prunus persica HOM05D002400 ORTHO05D002568 1.9e-07 60.8 111 32.4
RcHm_v2.0_Chr7g0217281 Rosa chinensis HOM05D002400 ORTHO05D002568 1.9e-07 60.8 119 37.0
Haze_24215 Corylus avellana HOM05D002400 ORTHO05D002568 4.2e-07 59.7 140 30.7
Haze_24470 Corylus avellana HOM05D002400 ORTHO05D002568 4.2e-07 59.7 144 31.9
MD02G1269000 Malus domestica HOM05D002400 ORTHO05D002568 5.5e-07 59.3 78 46.2
RcHm_v2.0_Chr7g0205941 Rosa chinensis HOM05D002400 ORTHO05D002568 5.5e-07 59.3 95 43.2
FAN08G3505 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.6e-06 57.8 75 44.0
Cfa005425 Carpinus fangiana HOM05D002400 ORTHO05D002568 3.6e-06 56.6 255 23.9
FAN04G2586 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.7e-06 56.2 53 52.8
FvH4_6g18961 Fragaria vesca HOM05D002400 ORTHO05D002568 6.1e-06 55.8 199 27.1
QL11p036174 Quercus lobata HOM05D002400 ORTHO05D002568 7.9e-06 55.5 143 26.6


User provided reference genes

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