Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2941 Fragaria x ananassa HOM05D004546 ORTHO05D005419 5.5e-232 807.4 438 100.0
FvH4_6g25020 Fragaria vesca HOM05D004546 ORTHO05D005419 7.5e-213 743.8 438 92.5
FAN14G0315 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.8e-207 725.3 465 87.1
FAN05G4088 Fragaria x ananassa HOM05D004546 ORTHO05D005419 8.0e-207 723.8 460 87.6
RcHm_v2.0_Chr7g0222021 Rosa chinensis HOM05D004546 ORTHO05D005419 1.1e-187 660.2 438 81.5
FvH4_7g06682 Fragaria vesca HOM05D004546 ORTHO05D005419 1.1e-134 484.2 437 60.9
FAN06G4932 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.6e-133 479.6 437 60.6
Prupe.1G570900 Prunus persica HOM05D004546 ORTHO05D005419 4.8e-127 458.8 437 60.0
Cfa005513 Carpinus fangiana HOM05D004546 ORTHO05D005419 7.2e-123 444.9 437 59.0
vmacro01757 Vaccinium macrocarpon HOM05D004546 ORTHO05D005419 6.7e-121 438.3 436 55.0
Hma1.2p1_1482F.1_g286200 Hydrangea macrophylla HOM05D004546 ORTHO05D005419 5.7e-120 435.3 436 55.7
GSVIVG01035964001 Vitis vinifera HOM05D004546 ORTHO05D005419 1.7e-119 433.7 436 56.2
CSS0049092 Camellia sinensis var. sinensis HOM05D004546 ORTHO05D005419 3.7e-119 432.6 417 57.1
Lalb_Chr12g0204461 Lupinus albus HOM05D004546 ORTHO05D005419 4.8e-119 432.2 439 54.2
Duzib177G0829 Durio zibethinus HOM05D004546 ORTHO05D005419 4.1e-118 429.1 437 54.7
Thecc.05G227600 Theobroma cacao HOM05D004546 ORTHO05D005419 2.6e-117 426.4 437 54.5
RcHm_v2.0_Chr1g0336301 Rosa chinensis HOM05D004546 ORTHO05D005419 5.5e-115 418.7 352 63.1
Sed0013794 Sechium edule HOM05D004546 ORTHO05D005419 1.4e-113 414.1 438 52.5
Rhsim09G0016100 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.3e-113 413.3 425 54.6
PGSC0003DMG400010002 Solanum tuberosum HOM05D004546 ORTHO05D005419 8.8e-113 411.4 436 52.1
Gorai.001G269700 Gossypium raimondii HOM05D004546 ORTHO05D005419 2.2e-111 406.8 437 54.2
Rhsim11G0128800 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.1e-110 404.4 438 53.2
CsaV3_5G025650 Cucumis sativus L. HOM05D004546 ORTHO05D005419 1.8e-110 403.7 438 52.3
Sabra17G0029200 Salix brachista HOM05D004546 ORTHO05D005419 4.1e-110 402.5 438 53.7
MD08G1233000 Malus domestica HOM05D004546 ORTHO05D005419 1.6e-109 400.6 437 52.9
THA.LOC104809617 Tarenaya hassleriana HOM05D004546 ORTHO05D005419 4.5e-109 399.1 437 50.1
Potri.007G116200 Populus trichocarpa HOM05D004546 ORTHO05D005419 2.2e-108 396.7 438 53.0
CiPaw.05G045000 Carya illinoinensis HOM05D004546 ORTHO05D005419 1.1e-107 394.4 376 58.8
MD15G1425300 Malus domestica HOM05D004546 ORTHO05D005419 1.1e-107 394.4 437 52.2
Potri.017G043000 Populus trichocarpa HOM05D004546 ORTHO05D005419 3.2e-107 392.9 437 52.4
Atru.chr8.1488 Acer truncatum HOM05D004546 ORTHO05D005419 3.6e-106 389.4 434 50.7
CARHR052070 Cardamine hirsuta HOM05D004546 ORTHO05D005419 1.0e-105 387.9 437 49.9
DCAR_006706 Daucus carota HOM05D004546 ORTHO05D005419 3.0e-105 386.3 432 50.9
ClCG03G000010 Citrullus lanatus HOM05D004546 ORTHO05D005419 4.0e-105 386.0 474 48.5
Phvul.002G249700 Phaseolus vulgaris HOM05D004546 ORTHO05D005419 4.0e-105 386.0 437 48.5
TAR628G0514 Trochodendron aralioides HOM05D004546 ORTHO05D005419 1.2e-104 384.4 391 54.7
Haze_01703 Corylus avellana HOM05D004546 ORTHO05D005419 2.0e-104 383.6 542 46.3
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 8.3e-103 378.3 425 49.9
Sp2g03510 Schrenkiella parvula HOM05D004546 ORTHO05D005419 8.3e-103 378.3 437 49.2
SHI16664 Sapria himalayana HOM05D004546 ORTHO05D005419 3.1e-102 376.3 428 49.3
Migut.B00830 Erythranthe guttata HOM05D004546 ORTHO05D005419 7.0e-102 375.2 437 47.8
Carub.0002s0420 Capsella rubella HOM05D004546 ORTHO05D005419 9.1e-102 374.8 437 48.3
FAN03G2280 Fragaria x ananassa HOM05D004546 ORTHO05D005419 9.1e-102 374.8 610 40.8
VMungo0251G0798 Vigna mungo HOM05D004546 ORTHO05D005419 9.1e-102 374.8 465 46.0
Sc11g0004500 Simmondsia chinensis HOM05D004546 ORTHO05D005419 5.9e-101 372.1 436 46.8
Ciclev10015244m.g Citrus clementina HOM05D004546 ORTHO05D005419 7.7e-101 371.7 373 55.2
MSTRG.16518 Avicennia marina HOM05D004546 ORTHO05D005419 3.8e-100 369.4 436 47.5
Aqoxy6G00209 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 8.6e-100 368.2 436 47.2
Nitab4.5_0003652g0050 Nicotiana tabacum HOM05D004546 ORTHO05D005419 1.1e-99 367.9 424 48.3
AT1G61000 Arabidopsis thaliana HOM05D004546 ORTHO05D005419 4.2e-99 365.9 437 47.6
Nitab4.5_0000753g0130 Nicotiana tabacum HOM05D004546 ORTHO05D005419 9.5e-99 364.8 424 48.1
Cc02_g22580 Coffea canephora HOM05D004546 ORTHO05D005419 1.2e-98 364.4 436 48.2
Lj4g0018170 Lotus japonicus HOM05D004546 ORTHO05D005419 1.6e-98 364.0 440 48.0
Peaxi162Scf00152g01427 Petunia axillaris HOM05D004546 ORTHO05D005419 2.1e-98 363.6 435 48.5
QL02p098920 Quercus lobata HOM05D004546 ORTHO05D005419 3.6e-98 362.8 438 50.5
Dinv24291 Davidia involucrata HOM05D004546 ORTHO05D005419 8.0e-98 361.7 436 49.1
C03p25600 Brassica napus HOM05D004546 ORTHO05D005419 1.0e-97 361.3 444 48.2
Glyma.05G169000 Glycine max HOM05D004546 ORTHO05D005419 3.0e-97 359.8 438 46.8
Gohir.D06G191600 Gossypium hirsutum HOM05D004546 ORTHO05D005419 4.0e-97 359.4 437 49.7
TPR.G23101 Trifolium pratense HOM05D004546 ORTHO05D005419 1.2e-96 357.8 439 47.2
A03p21620 Brassica napus HOM05D004546 ORTHO05D005419 1.5e-96 357.5 453 46.8
BraA03t11397Z Brassica rapa HOM05D004546 ORTHO05D005419 1.5e-96 357.5 453 46.8
BolC3t14948H Brassica oleracea HOM05D004546 ORTHO05D005419 9.8e-96 354.8 453 46.8
BolC4t24246H Brassica oleracea HOM05D004546 ORTHO05D005419 1.3e-95 354.4 446 46.2
PSO210G6794 Papaver somniferum HOM05D004546 ORTHO05D005419 2.8e-95 353.2 435 46.7
EL10Ac2g02703 Beta vulgaris HOM05D004546 ORTHO05D005419 6.3e-95 352.1 436 48.2
PSO210G7371 Papaver somniferum HOM05D004546 ORTHO05D005419 3.2e-94 349.7 435 46.0
Actinidia00204 Actinidia chinensis HOM05D004546 ORTHO05D005419 4.1e-94 349.4 436 48.2
Sopen10g008970 Solanum pennellii HOM05D004546 ORTHO05D005419 5.4e-94 349.0 436 46.3
Eucgr.G00575 Eucalyptus grandis HOM05D004546 ORTHO05D005419 7.0e-94 348.6 437 46.9
ECA234G1828 Erigeron canadensis HOM05D004546 ORTHO05D005419 2.7e-93 346.7 437 44.6
CANSAT54G1257 Cannabis sativa HOM05D004546 ORTHO05D005419 7.8e-93 345.1 369 52.6
Thhalv10023463m.g Eutrema salsugineum HOM05D004546 ORTHO05D005419 1.0e-92 344.7 437 45.1
Sabra07G0094500 Salix brachista HOM05D004546 ORTHO05D005419 4.7e-90 335.9 592 39.4
SGA_v2.0_scaffold110G31325 Striga asiatica HOM05D004546 ORTHO05D005419 1.4e-89 334.3 441 45.1
Manes.10G066500 Manihot esculenta HOM05D004546 ORTHO05D005419 3.1e-89 333.2 439 46.5
C04p25630 Brassica napus HOM05D004546 ORTHO05D005419 4.0e-89 332.8 495 41.6
Lsat_1_v5_gn_5_105520 Lactuca sativa HOM05D004546 ORTHO05D005419 4.0e-89 332.8 436 44.3
arahy.Tifrunner.gnm1.ann1.SB4BQ5 Arachis hypogaea HOM05D004546 ORTHO05D005419 8.9e-89 331.6 439 43.5
Gorai.010G224800 Gossypium raimondii HOM05D004546 ORTHO05D005419 8.9e-89 331.6 437 47.1
Rhsim09G0048700 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.5e-88 330.9 322 56.8
arahy.Tifrunner.gnm1.ann1.QA5S84 Arachis hypogaea HOM05D004546 ORTHO05D005419 1.3e-87 327.8 439 44.2
GSVIVG01022895001 Vitis vinifera HOM05D004546 ORTHO05D005419 1.9e-86 323.9 436 44.5
Lj5A252T47 Lonicera japonica HOM05D004546 ORTHO05D005419 5.4e-86 322.4 437 44.2
Solyc10g019040.2 Solanum lycopersicum HOM05D004546 ORTHO05D005419 1.6e-85 320.9 436 43.8
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 2.7e-85 320.1 441 45.8
Ah.14g086060 Amaranthus hybridus HOM05D004546 ORTHO05D005419 4.6e-85 319.3 430 44.7
Gohir.A06G184800 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.0e-84 318.2 419 47.0
HanXRQChr10g0290511 Helianthus annuus HOM05D004546 ORTHO05D005419 8.6e-84 315.1 438 43.6
Medtr8g088840 Medicago truncatula HOM05D004546 ORTHO05D005419 4.3e-83 312.8 435 43.2
Gohir.D07G234200 Gossypium hirsutum HOM05D004546 ORTHO05D005419 5.6e-83 312.4 437 44.9
BcaC02g10598 Brassica carinata HOM05D004546 ORTHO05D005419 3.6e-82 309.7 462 41.1
Cpa.g.sc8.264 Carica papaya HOM05D004546 ORTHO05D005419 8.1e-82 308.5 303 56.4
CAN.G1330.18 Capsicum annuum HOM05D004546 ORTHO05D005419 6.8e-81 305.4 436 42.0
Ca_17808_v3 Cicer arietinum L. HOM05D004546 ORTHO05D005419 1.7e-79 300.8 441 42.2
Atru.chr13.2649 Acer truncatum HOM05D004546 ORTHO05D005419 1.1e-78 298.1 348 50.6
Psat7g062000 Pisum sativum HOM05D004546 ORTHO05D005419 1.1e-78 298.1 437 39.8
TWI59G0103 Tripterygium wilfordii HOM05D004546 ORTHO05D005419 1.2e-77 294.7 437 42.1
Gohir.A07G227000 Gossypium hirsutum HOM05D004546 ORTHO05D005419 4.6e-77 292.7 419 43.9
PGR042G1236 Punica granatum HOM05D004546 ORTHO05D005419 4.6e-77 292.7 437 40.3
AUR62014224 Chenopodium quinoa HOM05D004546 ORTHO05D005419 1.7e-76 290.8 423 42.8
Carub.0002s0419 Capsella rubella HOM05D004546 ORTHO05D005419 6.6e-76 288.9 452 41.2
Peaxi162Scf00152g01529 Petunia axillaris HOM05D004546 ORTHO05D005419 1.9e-75 287.3 443 42.4
CDE08G0494 Ceratophyllum demersum HOM05D004546 ORTHO05D005419 1.5e-72 277.7 396 43.7
Medtr4g049650 Medicago truncatula HOM05D004546 ORTHO05D005419 2.0e-72 277.3 382 42.7
AUR62041118 Chenopodium quinoa HOM05D004546 ORTHO05D005419 7.6e-72 275.4 423 40.9
Hund15499 Selenicereus undatus HOM05D004546 ORTHO05D005419 1.1e-67 261.5 321 47.0
COL.COLO4_10577 Corchorus olitorius HOM05D004546 ORTHO05D005419 2.5e-67 260.4 445 40.4
HPP92_000323 Vanilla planifolia HOM05D004546 ORTHO05D005419 1.1e-65 255.0 438 37.7
Oeu033122.2 Olea europaea HOM05D004546 ORTHO05D005419 2.6e-64 250.4 247 50.6
Nn1g08777 Nelumbo nucifera HOM05D004546 ORTHO05D005419 1.7e-63 247.7 345 45.2
TPR.G28353 Trifolium pratense HOM05D004546 ORTHO05D005419 9.3e-62 241.9 287 47.0
Medtr8g088800 Medicago truncatula HOM05D004546 ORTHO05D005419 3.5e-61 240.0 424 39.2
VMungo0251G0767 Vigna mungo HOM05D004546 ORTHO05D005419 4.6e-61 239.6 479 35.3
FAN10G1533 Fragaria x ananassa HOM05D004546 ORTHO05D005419 7.8e-61 238.8 424 40.8
AL2G15450 Arabidopsis lyrata HOM05D004546 ORTHO05D005419 9.0e-57 225.3 305 46.9
unitig_8.g2954 Utricularia gibba HOM05D004546 ORTHO05D005419 8.4e-55 218.8 437 35.2
Os03g0577100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 2.1e-53 214.2 442 33.0
Os08g0163100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 1.1e-49 201.8 442 31.7
MELO3C002916.2 Cucumis melo HOM05D004546 ORTHO05D005419 4.5e-48 196.4 221 54.8
TPR.G38758 Trifolium pratense HOM05D004546 ORTHO05D005419 1.3e-47 194.9 272 41.5
Eucgr.L03482 Eucalyptus grandis HOM05D004546 ORTHO05D005419 8.4e-47 192.2 220 46.8
Lsat_1_v5_gn_8_80961 Lactuca sativa HOM05D004546 ORTHO05D005419 1.2e-45 188.3 230 44.3
COL.COLO4_13071 Corchorus olitorius HOM05D004546 ORTHO05D005419 4.6e-45 186.4 205 47.8
Rhsim09G0048900 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.8e-41 174.5 413 33.2
ATR0177G064 Amborella trichopoda HOM05D004546 ORTHO05D005419 6.7e-36 156.0 339 33.9
Oeu027800.1 Olea europaea HOM05D004546 ORTHO05D005419 6.7e-36 156.0 174 54.0
C05p50930 Brassica napus HOM05D004546 ORTHO05D005419 8.7e-36 155.6 206 40.3
TPR.G31804 Trifolium pratense HOM05D004546 ORTHO05D005419 1.1e-35 155.2 216 47.2
Zm00001eb064460 Zea mays HOM05D004546 ORTHO05D005419 7.6e-32 142.5 395 28.4
SEGI_32079 Sequoiadendron giganteum HOM05D004546 ORTHO05D005419 2.2e-31 141.0 432 29.2
TPR.G37878 Trifolium pratense HOM05D004546 ORTHO05D005419 1.0e-28 132.1 158 43.7
MD08G1232500 Malus domestica HOM05D004546 ORTHO05D005419 6.3e-26 122.9 97 60.8
Atru.chr4.610 Acer truncatum HOM05D004546 ORTHO05D005419 1.4e-25 121.7 139 43.9
C05p50920 Brassica napus HOM05D004546 ORTHO05D005419 6.9e-25 119.4 165 44.8
AagrBONN_evm.TU.Sc2ySwM_117.2656 Anthoceros agrestis HOM05D004546 ORTHO05D005419 1.5e-24 118.2 250 30.8
Aqoxy7G01614 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 1.7e-23 114.8 357 28.6
Hund15500 Selenicereus undatus HOM05D004546 ORTHO05D005419 1.0e-20 105.5 137 49.6
PSO210G1504 Papaver somniferum HOM05D004546 ORTHO05D005419 4.3e-19 100.1 149 43.6
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.7e-18 98.2 100 49.0
TPR.G37996 Trifolium pratense HOM05D004546 ORTHO05D005419 2.8e-18 97.4 164 39.6
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 8.2e-18 95.9 99 47.5
CAN.G1882.2 Capsicum annuum HOM05D004546 ORTHO05D005419 1.1e-17 95.5 115 49.6
CAN.G1882.3 Capsicum annuum HOM05D004546 ORTHO05D005419 3.2e-14 84.0 81 58.0
Atru.chr4.605 Acer truncatum HOM05D005324 ORTHO05D001185 1.6e-13 81.6 98 51.0
TPR.G7268 Trifolium pratense HOM05D004546 ORTHO05D005419 1.0e-12 79.0 74 59.5
Rhsim09G0048500 Rhododendron simsii HOM05D004546 ORTHO05D005419 5.7e-11 73.2 429 25.4
Mapoly0004s0096 Marchantia polymorpha HOM05D004546 ORTHO05D005419 1.3e-10 72.0 207 29.0
TPR.G18400 Trifolium pratense HOM05D004546 ORTHO05D005419 7.7e-08 62.8 66 53.0
COL.COLO4_15711 Corchorus olitorius HOM05D004546 ORTHO05D005419 1.7e-07 61.6 68 54.4
MBI17_g42496_MAGBIO Magnolia biondii HOM05D004546 ORTHO05D005419 1.9e-06 58.2 107 31.8
Pp3c12_6220 Physcomitrium patens HOM05D004546 ORTHO05D005419 9.4e-06 55.8 431 22.0


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