Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2871 Fragaria x ananassa HOM05D005710 ORTHO05D004657 4.1e-84 314.7 158 100.0
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 8.5e-66 253.8 136 93.4
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 8.5e-66 253.8 136 93.4
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 3.2e-65 251.9 136 92.6
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 1.4e-63 246.5 140 90.0
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 3.8e-50 201.8 136 77.9
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 1.5e-41 173.3 147 65.3
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 3.7e-37 158.7 149 60.4
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 5.9e-35 151.4 149 59.7
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 7.3e-25 117.9 142 52.8
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 9.5e-25 117.5 150 50.7
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 1.8e-23 113.2 142 51.4
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 5.2e-23 111.7 142 50.7
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 3.9e-18 95.5 145 44.8
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 1.1e-17 94.0 142 43.0
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 3.3e-17 92.4 146 43.2
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 4.3e-17 92.0 145 42.1
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 1.2e-16 90.5 133 46.6
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 2.8e-16 89.4 144 43.1
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 8.1e-16 87.8 141 41.8
TAR371G0637 Trochodendron aralioides HOM05D005710 ORTHO05D004657 5.2e-15 85.1 143 42.7
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 6.8e-15 84.7 148 40.5
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 1.2e-14 84.0 140 42.1
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 1.5e-14 83.6 140 45.0
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 4.4e-14 82.0 139 41.0
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 7.5e-14 81.3 142 43.0
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 2.4e-12 76.3 133 38.3
Nn4g23370 Nelumbo nucifera HOM05D005710 ORTHO05D004657 7.1e-12 74.7 137 40.9
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 7.1e-12 74.7 127 41.7
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 1.2e-11 73.9 124 41.1
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 6.0e-11 71.6 98 43.9
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 6.0e-11 71.6 143 39.2
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 7.8e-11 71.2 97 49.5
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 1.7e-10 70.1 138 39.9
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 3.0e-10 69.3 146 35.6
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 5.1e-10 68.6 131 38.2
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 6.6e-10 68.2 131 37.4
Medtr7g012940 Medicago truncatula HOM05D005710 ORTHO05D004657 6.6e-10 68.2 136 37.5
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 4.3e-09 65.5 134 38.1
Ca_06819_v3 Cicer arietinum L. HOM05D005710 ORTHO05D004657 5.6e-09 65.1 126 40.5
Glyma.08G242700 Glycine max HOM05D005710 ORTHO05D004657 5.6e-09 65.1 143 39.9
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 1.2e-08 63.9 148 38.5
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 1.2e-08 63.9 148 35.8
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 2.8e-08 62.8 124 39.5
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 3.6e-08 62.4 147 37.4
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 6.2e-08 61.6 133 37.6
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 8.1e-08 61.2 122 38.5
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 2.3e-07 59.7 148 37.2
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 2.3e-07 59.7 132 40.2
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 6.8e-07 58.2 132 37.9
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.2e-06 57.4 81 45.7
VMungo1383G0251 Vigna mungo HOM05D005710 ORTHO05D004657 2.6e-06 56.2 130 34.6
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 9.9e-06 54.3 85 44.7


User provided reference genes

Program Settings