Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.8e-158 562.0 307 100.0
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 7.2e-154 547.4 307 97.4
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 1.3e-147 526.6 307 95.1
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 3.8e-139 498.4 307 91.5
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.6e-135 485.7 265 98.9
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 7.5e-135 484.2 265 98.9
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 7.5e-135 484.2 302 86.4
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 1.3e-131 473.4 305 85.9
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 1.7e-131 473.0 304 84.5
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.7e-123 446.4 268 86.2
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 4.3e-122 441.8 264 87.1
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 5.6e-122 441.4 265 87.5
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 1.6e-121 439.9 265 87.2
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.1e-120 437.2 265 85.7
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.1e-120 437.2 268 84.3
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.2e-119 433.7 268 83.6
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.5e-119 433.3 328 76.2
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 2.6e-119 432.6 265 83.8
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 5.8e-119 431.4 265 84.5
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.3e-118 430.3 265 85.7
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 2.2e-118 429.5 265 85.7
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 2.9e-118 429.1 265 84.9
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 4.9e-118 428.3 261 86.2
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 8.3e-118 427.6 265 83.8
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 1.9e-117 426.4 295 78.3
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.9e-117 426.4 265 84.2
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.9e-117 426.4 265 84.9
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.4e-117 426.0 263 84.4
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 2.4e-117 426.0 265 84.2
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 3.2e-117 425.6 265 84.5
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 4.1e-117 425.2 265 84.2
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 4.1e-117 425.2 265 83.4
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 5.4e-117 424.9 265 85.3
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 7.1e-117 424.5 265 83.4
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 7.1e-117 424.5 265 82.6
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 1.6e-116 423.3 265 83.4
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 2.7e-116 422.5 261 84.7
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 3.5e-116 422.2 265 83.4
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 4.6e-116 421.8 265 81.9
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 1.0e-115 420.6 262 82.8
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.0e-115 420.6 265 81.9
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 1.3e-115 420.2 265 82.6
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 1.3e-115 420.2 265 83.0
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.7e-115 419.9 265 84.5
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 2.3e-115 419.5 265 82.3
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 8.6e-115 417.5 265 82.6
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 8.6e-115 417.5 264 82.2
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 1.5e-114 416.8 264 81.1
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 3.3e-114 415.6 264 82.2
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 4.3e-114 415.2 259 83.4
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 4.3e-114 415.2 259 83.4
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 4.3e-114 415.2 265 81.9
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 5.6e-114 414.8 262 82.4
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 5.6e-114 414.8 259 83.4
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 7.3e-114 414.5 264 81.1
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 7.3e-114 414.5 293 76.8
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 7.3e-114 414.5 286 77.3
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 1.2e-113 413.7 259 83.8
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.6e-113 413.3 266 79.3
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 2.8e-113 412.5 262 81.3
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 2.8e-113 412.5 261 82.4
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 2.8e-113 412.5 263 81.7
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 2.8e-113 412.5 268 82.1
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 2.8e-113 412.5 262 81.7
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 3.6e-113 412.1 262 82.1
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 3.6e-113 412.1 259 83.0
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 3.6e-113 412.1 259 83.0
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 4.7e-113 411.8 262 81.3
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 6.2e-113 411.4 265 81.1
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 8.1e-113 411.0 253 85.4
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.1e-112 410.6 263 81.7
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 1.8e-112 409.8 263 81.4
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 2.3e-112 409.5 262 81.3
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 4.0e-112 408.7 265 80.4
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 5.2e-112 408.3 262 80.9
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 5.2e-112 408.3 274 77.4
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 6.8e-112 407.9 262 80.5
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 8.9e-112 407.5 263 81.4
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 1.5e-111 406.8 265 79.6
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 2.0e-111 406.4 262 81.3
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 4.4e-111 405.2 265 80.4
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 4.4e-111 405.2 262 79.8
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 4.4e-111 405.2 263 80.6
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 4.4e-111 405.2 263 80.6
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 5.8e-111 404.8 260 80.8
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 5.8e-111 404.8 260 80.8
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 1.7e-110 403.3 253 83.8
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 2.9e-110 402.5 254 83.5
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 8.4e-110 401.0 265 78.1
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 3.5e-108 395.6 241 85.5
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 4.6e-108 395.2 264 79.2
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 6.0e-108 394.8 287 76.3
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 1.0e-107 394.0 262 78.6
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 2.3e-107 392.9 259 79.5
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 3.0e-107 392.5 263 77.6
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 8.6e-107 391.0 225 90.2
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.1e-106 390.6 253 80.2
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.1e-106 390.6 251 81.3
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 5.6e-106 388.3 259 78.4
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 8.1e-105 384.4 286 75.2
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.1e-104 384.0 263 76.8
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.2e-103 380.6 264 72.3
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 5.8e-103 378.3 258 76.0
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 8.4e-102 374.4 225 86.7
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 1.4e-101 373.6 238 81.5
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 4.6e-100 368.6 262 71.8
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 2.5e-98 362.8 265 74.7
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 3.3e-98 362.5 265 72.5
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 7.3e-98 361.3 276 69.6
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.8e-97 359.4 262 70.6
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 5.3e-96 355.1 255 72.9
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 4.2e-93 345.5 265 68.7
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 6.2e-89 331.6 265 68.7
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 8.1e-89 331.3 258 67.1
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 2.6e-87 326.2 187 90.9
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.7e-86 323.6 252 69.4
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.1e-67 258.8 179 74.3
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-66 257.3 255 52.9
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 2.8e-65 253.1 265 57.7
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 4.8e-65 252.3 151 87.4
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 9.1e-64 248.1 161 82.6
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.6e-60 236.1 154 81.8
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.2e-52 211.1 265 50.9
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 4.8e-49 199.1 245 43.7
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 3.2e-45 186.4 249 41.0
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 5.9e-39 165.6 234 39.7
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.8e-35 154.1 98 77.6
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.7e-34 149.1 96 81.2
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.3e-33 147.9 240 36.2
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 1.1e-32 144.8 118 70.3
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 3.5e-31 139.8 77 92.2
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.6e-28 131.0 75 88.0
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 5.4e-24 115.9 233 36.1
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 1.0e-22 111.7 100 62.0
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 4.0e-11 73.2 75 60.0


User provided reference genes

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