Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 9.2e-264 912.9 433 100.0
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 9.5e-261 902.9 433 98.6
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 6.2e-260 900.2 433 98.2
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 8.1e-260 899.8 433 97.9
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.1e-259 897.9 433 98.2
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 2.6e-242 841.6 428 91.8
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 3.7e-220 768.1 422 82.9
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 4.1e-219 764.6 422 82.7
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 4.8e-196 688.0 428 74.8
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 4.8e-196 688.0 424 73.8
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 8.2e-196 687.2 414 76.3
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 1.1e-195 686.8 428 74.8
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 3.5e-194 681.8 427 74.5
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.9e-194 681.0 427 74.2
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 2.2e-193 679.1 427 73.8
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 3.8e-193 678.3 424 74.3
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 5.0e-193 677.9 424 74.5
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 6.5e-193 677.6 423 74.0
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 8.5e-193 677.2 431 72.4
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 8.5e-193 677.2 431 72.4
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 3.2e-192 675.2 424 73.8
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.5e-192 674.5 423 73.8
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.7e-191 671.4 423 72.1
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 4.7e-191 671.4 422 72.7
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 8.0e-191 670.6 414 75.6
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 2.6e-189 665.6 423 72.8
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 4.4e-189 664.8 423 73.8
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 4.4e-189 664.8 423 72.8
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 4.8e-188 661.4 415 74.5
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 8.3e-188 660.6 422 71.8
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 1.8e-187 659.4 424 71.9
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 7.0e-187 657.5 426 70.9
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 7.0e-187 657.5 425 70.4
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.2e-186 656.8 424 71.9
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 1.2e-186 656.8 424 71.9
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 4.5e-186 654.8 424 70.5
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 4.5e-186 654.8 422 71.1
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 7.7e-186 654.1 426 71.8
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 1.0e-185 653.7 425 70.6
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 1.7e-185 652.9 423 72.8
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 2.9e-185 652.1 424 71.5
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 6.5e-185 651.0 426 70.4
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 8.5e-185 650.6 426 71.6
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 1.1e-184 650.2 426 70.0
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 1.9e-184 649.4 414 72.2
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 1.9e-184 649.4 424 70.3
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 2.5e-184 649.0 422 69.4
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 2.5e-184 649.0 432 70.6
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 4.2e-184 648.3 426 71.1
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 2.7e-183 645.6 433 69.3
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 4.7e-183 644.8 423 70.9
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 6.1e-183 644.4 424 69.6
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 1.0e-182 643.7 433 69.1
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 1.4e-182 643.3 424 69.6
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 2.3e-182 642.5 425 69.2
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 3.0e-182 642.1 421 70.5
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 8.8e-182 640.6 418 70.8
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 2.0e-181 639.4 425 70.6
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 4.4e-181 638.3 425 69.6
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 1.7e-180 636.3 422 69.2
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 3.7e-180 635.2 424 68.4
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 4.8e-180 634.8 423 69.3
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 4.8e-180 634.8 424 68.4
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 1.8e-179 632.9 424 68.4
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 5.4e-179 631.3 423 67.8
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 1.6e-178 629.8 422 69.0
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 1.6e-178 629.8 425 69.4
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 2.0e-178 629.4 425 68.7
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 4.5e-178 628.2 424 68.2
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 5.9e-178 627.9 355 78.0
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 5.9e-178 627.9 358 76.8
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 7.7e-178 627.5 423 70.9
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 7.7e-178 627.5 425 68.7
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.3e-177 626.7 414 69.1
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 3.8e-177 625.2 416 68.0
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 1.5e-176 623.2 423 67.4
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 4.2e-176 621.7 422 67.1
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 2.8e-175 619.0 416 67.5
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 8.0e-175 617.5 389 71.7
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 2.6e-173 612.5 423 66.4
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 1.3e-172 610.1 427 68.1
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 6.3e-172 607.8 422 66.1
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 3.1e-171 605.5 421 65.3
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 1.6e-170 603.2 423 66.0
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 1.0e-169 600.5 345 76.2
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 1.7e-169 599.7 421 65.6
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 2.1e-167 592.8 421 66.5
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.8e-167 592.4 423 66.2
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 3.6e-167 592.0 421 66.5
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 6.1e-167 591.3 422 64.0
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 6.1e-167 591.3 421 65.6
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 4.0e-166 588.6 421 64.4
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 4.0e-166 588.6 421 64.6
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 3.4e-165 585.5 432 66.0
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 7.5e-165 584.3 421 64.6
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 7.5e-165 584.3 421 64.6
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 2.9e-164 582.4 417 65.0
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 3.7e-164 582.0 421 63.7
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 8.3e-164 580.9 426 62.4
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.1e-163 580.5 422 64.0
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 2.4e-163 579.3 336 74.4
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 4.1e-163 578.6 335 74.6
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 3.9e-161 572.0 349 70.8
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 5.0e-161 571.6 392 67.6
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 5.0e-161 571.6 359 69.1
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 8.6e-161 570.9 419 62.1
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 8.6e-161 570.9 282 88.3
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 3.6e-159 565.5 421 62.9
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 8.0e-159 564.3 378 66.7
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 4.0e-158 562.0 358 68.7
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 1.2e-157 560.5 429 61.8
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 1.5e-157 560.1 377 65.3
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 3.9e-153 545.4 431 61.5
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 9.5e-144 514.2 361 64.3
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 4.0e-142 508.8 282 77.3
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 3.8e-140 502.3 365 62.2
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 1.8e-134 483.4 349 60.7
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 4.2e-131 472.2 356 61.2
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 8.7e-121 438.0 339 61.9
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 5.3e-102 375.6 437 46.0
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 7.7e-101 371.7 210 75.2
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 9.4e-99 364.8 209 74.6
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 8.8e-97 358.2 217 70.0
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 1.9e-91 340.5 314 52.9
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 2.0e-64 250.8 248 54.4
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.0e-57 228.4 390 39.5
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 7.1e-30 136.0 94 59.6
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 4.4e-24 116.7 59 81.4
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 1.7e-23 114.8 80 61.2
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.1e-17 95.5 118 44.1
CSS0018959 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D112597 1.3e-07 62.0 57 50.9


User provided reference genes

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