Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2781 Fragaria x ananassa HOM05D000007 ORTHO05D029697 1.0e-130 469.9 220 100.0
RcHm_v2.0_Chr2g0131131 Rosa chinensis HOM05D000007 ORTHO05D000521 1.8e-34 150.2 142 54.2
Prupe.3G112400 Prunus persica HOM05D000007 ORTHO05D000521 4.4e-28 129.0 156 47.4
MD01G1181800 Malus domestica HOM05D000007 ORTHO05D000521 9.8e-28 127.9 168 45.2
MD17G1263300 Malus domestica HOM05D000007 ORTHO05D000521 3.7e-27 125.9 154 49.4
FAN14G1773 Fragaria x ananassa HOM05D000007 ORTHO05D029697 1.8e-26 123.6 64 82.8
Rhsim07G0064600 Rhododendron simsii HOM05D000007 ORTHO05D000521 7.0e-26 121.7 196 38.3
FAN09G2562 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.9e-23 113.6 136 48.5
FAN09G3937 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.9e-23 113.6 136 48.5
Rhsim07G0064700 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.5e-23 113.2 167 40.1
Rhsim07G0064500 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.3e-23 112.8 132 45.5
Prupe.3G111700 Prunus persica HOM05D000007 ORTHO05D000521 2.1e-22 110.2 160 42.5
Rhsim01G0070100 Rhododendron simsii HOM05D000007 ORTHO05D013865 1.8e-21 107.1 130 45.4
Rhsim01G0070300 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.5e-20 104.0 194 37.1
Hma1.2p1_0270F.1_g108160 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 4.4e-20 102.4 157 38.9
Rhsim01G0072600 Rhododendron simsii HOM05D000007 ORTHO05D000521 4.4e-20 102.4 159 40.3
RhsimUnG0082900 Rhododendron simsii HOM05D000007 ORTHO05D013865 4.4e-20 102.4 159 40.3
FvH4_6g28330 Fragaria vesca HOM05D000007 ORTHO05D000676 7.5e-20 101.7 136 41.9
FAN02G0113 Fragaria x ananassa HOM05D000007 ORTHO05D000521 7.5e-20 101.7 136 41.9
Rhsim01G0071800 Rhododendron simsii HOM05D000007 ORTHO05D000521 7.5e-20 101.7 159 40.3
CANSAT64G2453 Cannabis sativa HOM05D000007 ORTHO05D000521 3.2e-18 96.3 155 36.8
Rhsim07G0063500 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.2e-18 96.3 136 39.7
Prupe.3G112200 Prunus persica HOM05D000007 ORTHO05D000521 4.1e-18 95.9 167 35.3
Prupe.3G112000 Prunus persica HOM05D000007 ORTHO05D000521 7.0e-18 95.1 172 36.0
RhsimUnG0082800 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.3e-16 90.1 122 45.1
Hma1.2p1_1251F.1_g270320 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 3.9e-16 89.4 171 36.8
Dinv34353 Davidia involucrata HOM05D000007 ORTHO05D000521 8.6e-16 88.2 139 35.3
Rhsim07G0063800 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.3e-15 86.3 135 40.7
Rhsim07G0064200 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.2e-14 84.3 171 34.5
Rhsim07G0064100 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.8e-14 83.2 162 35.8
CANSAT64G2796 Cannabis sativa HOM05D000007 ORTHO05D000676 3.6e-14 82.8 134 37.3
FAN05G3533 Fragaria x ananassa HOM05D018771 ORTHO05D029697 5.2e-13 79.0 63 66.7
Rhsim07G0064300 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.8e-13 78.6 163 38.0
Thecc.08G139900 Theobroma cacao HOM05D023714 ORTHO05D025667 1.5e-12 77.4 129 32.6
Lalb_Chr17g0348371 Lupinus albus HOM05D000007 ORTHO05D000521 5.8e-12 75.5 138 35.5
Dinv34341 Davidia involucrata HOM05D000007 ORTHO05D000521 4.9e-11 72.4 119 37.0
CANSAT11G1035 Cannabis sativa HOM05D000007 ORTHO05D000676 9.2e-10 68.2 127 37.8
Oeu000695.1 Olea europaea HOM05D000007 ORTHO05D013865 2.7e-09 66.6 173 30.1
TPR.G17766 Trifolium pratense HOM05D000007 ORTHO05D000521 2.7e-09 66.6 134 33.6
Oeu031731.1 Olea europaea HOM05D000007 ORTHO05D013865 1.0e-08 64.7 125 32.0
Medtr6g046320 Medicago truncatula HOM05D000007 ORTHO05D000521 2.3e-08 63.5 132 35.6
Prupe.3G110500 Prunus persica HOM05D000007 ORTHO05D029697 2.3e-08 63.5 55 52.7
TPR.G13023 Trifolium pratense HOM05D000007 ORTHO05D000521 6.6e-08 62.0 176 29.5
TPR.G18189 Trifolium pratense HOM05D000007 ORTHO05D000521 8.6e-08 61.6 125 33.6
TPR.G13135 Trifolium pratense HOM05D000007 ORTHO05D000521 1.9e-07 60.5 183 30.6
TPR.G18192 Trifolium pratense HOM05D000007 ORTHO05D000521 1.9e-07 60.5 122 35.2
CANSAT64G1494 Cannabis sativa HOM05D000007 ORTHO05D000521 3.3e-07 59.7 124 30.6
FAN14G1599 Fragaria x ananassa HOM05D018771 ORTHO05D000521 5.6e-07 58.9 50 60.0
FAN09G2105 Fragaria x ananassa HOM05D018771 ORTHO05D000521 2.8e-06 56.6 40 70.0
FAN09G4071 Fragaria x ananassa HOM05D018771 ORTHO05D000521 2.8e-06 56.6 40 70.0
Medtr5g022900 Medicago truncatula HOM05D000007 ORTHO05D000521 2.8e-06 56.6 192 29.7
Rhsim01G0072000 Rhododendron simsii HOM05D000007 ORTHO05D013865 2.8e-06 56.6 85 38.8
TPR.G4156 Trifolium pratense HOM05D000007 ORTHO05D000521 2.8e-06 56.6 162 31.5
Medtr5g007940 Medicago truncatula HOM05D000007 ORTHO05D000521 4.7e-06 55.8 175 29.7
Medtr5g027370 Medicago truncatula HOM05D000007 ORTHO05D000521 4.7e-06 55.8 162 30.9


User provided reference genes

Program Settings