Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 1.5e-228 795.8 404 100.0
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 1.8e-208 729.2 403 92.3
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 1.2e-204 716.5 373 98.4
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 1.1e-181 640.2 411 82.0
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 3.6e-177 625.2 421 78.4
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 9.2e-165 583.9 402 76.4
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.8e-161 572.4 406 73.2
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 2.0e-159 566.2 399 72.9
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 3.4e-159 565.5 396 74.2
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.4e-157 560.1 393 74.3
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 3.2e-157 558.9 401 72.6
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 4.1e-157 558.5 400 72.2
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 5.4e-157 558.1 411 71.5
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 2.7e-156 555.8 386 75.4
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 4.6e-156 555.1 376 75.8
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 5.9e-156 554.7 352 79.8
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 7.8e-156 554.3 366 77.0
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.3e-155 553.5 409 72.6
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 1.1e-154 550.4 388 74.0
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 1.5e-154 550.1 397 73.0
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 9.5e-154 547.4 420 69.5
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 6.2e-153 544.7 396 73.0
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 1.1e-152 543.9 406 70.7
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 1.4e-152 543.5 402 71.4
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 6.8e-152 541.2 407 69.5
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 8.9e-152 540.8 376 73.1
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.2e-151 540.4 402 70.1
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 2.0e-151 539.7 420 69.0
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 7.5e-151 537.7 366 74.9
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 9.8e-151 537.3 386 71.0
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 2.2e-150 536.2 411 68.9
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 3.7e-150 535.4 409 68.2
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 6.4e-150 534.6 399 68.9
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 1.1e-149 533.9 359 74.7
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 2.4e-149 532.7 436 65.1
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 4.1e-149 531.9 372 73.4
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 4.1e-149 531.9 355 73.5
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 1.2e-148 530.4 453 63.6
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 1.2e-148 530.4 342 78.7
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 2.7e-148 529.3 385 71.7
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 3.5e-148 528.9 392 69.4
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 6.0e-148 528.1 398 69.6
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 1.0e-147 527.3 392 68.6
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 5.0e-147 525.0 355 75.2
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 1.1e-146 523.9 411 66.7
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 2.5e-146 522.7 410 66.6
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 3.3e-146 522.3 391 70.1
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 4.3e-146 521.9 355 74.6
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 5.6e-146 521.5 382 70.2
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.1e-145 519.6 363 73.6
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 3.6e-145 518.8 351 74.1
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 6.2e-145 518.1 350 75.7
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 6.2e-145 518.1 410 66.8
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 4.0e-144 515.4 401 65.6
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 8.9e-144 514.2 397 68.3
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 8.9e-144 514.2 420 64.5
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 8.9e-144 514.2 387 67.4
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 2.0e-143 513.1 402 67.4
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 2.0e-143 513.1 365 70.7
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 3.4e-143 512.3 353 71.7
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 4.4e-143 511.9 365 71.0
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 5.8e-143 511.5 414 66.4
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 9.9e-143 510.8 365 70.1
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 1.3e-142 510.4 367 69.2
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 1.3e-142 510.4 367 69.2
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 1.7e-142 510.0 386 66.3
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 1.7e-142 510.0 363 72.5
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 4.9e-142 508.4 398 65.3
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 4.9e-142 508.4 352 73.6
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 8.3e-142 507.7 394 65.2
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 1.1e-141 507.3 388 67.8
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 1.4e-141 506.9 366 69.4
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 1.4e-141 506.9 395 68.1
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 3.2e-141 505.8 365 69.6
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 4.1e-141 505.4 388 66.8
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 7.1e-141 504.6 400 65.5
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 2.1e-140 503.1 400 66.0
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 4.6e-140 501.9 346 73.4
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 8.6e-139 497.7 369 68.0
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 9.5e-138 494.2 441 66.0
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 6.2e-137 491.5 375 69.9
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 2.4e-136 489.6 372 69.4
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 2.6e-135 486.1 365 69.9
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 2.2e-134 483.0 352 71.0
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 8.4e-134 481.1 365 68.2
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 9.2e-133 477.6 367 69.2
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 2.7e-132 476.1 346 72.0
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 2.7e-132 476.1 346 72.3
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 2.7e-132 476.1 314 75.5
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 5.1e-131 471.9 316 73.7
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 1.2e-129 467.2 391 66.0
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 7.1e-125 451.4 315 72.4
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 3.9e-123 445.7 272 79.4
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 1.5e-119 433.7 325 67.1
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 3.4e-111 406.0 358 58.7
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 7.6e-111 404.8 393 53.9
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.1e-100 370.2 357 53.2
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 5.7e-98 362.1 347 54.5
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 2.2e-86 323.6 258 68.2
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 6.5e-86 322.0 285 58.9
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 3.2e-85 319.7 278 59.0
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 4.4e-82 309.3 351 49.6
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 5.7e-82 308.9 186 83.3
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 4.5e-71 272.7 362 43.9
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 1.3e-70 271.2 185 74.1
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 4.2e-69 266.2 184 69.6
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 8.8e-67 258.5 411 38.4
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 8.8e-67 258.5 411 38.4
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.7e-63 246.9 423 36.2
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 3.2e-61 240.0 246 54.5
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 4.8e-57 226.1 516 30.6
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 6.3e-57 225.7 343 41.7
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 9.2e-48 195.3 366 37.7
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 1.0e-46 191.8 177 61.0
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 3.9e-38 163.3 139 56.8
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 2.0e-34 151.0 126 58.7
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 3.3e-21 107.1 71 76.1
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 6.2e-20 102.8 67 74.6
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 5.2e-19 99.8 67 73.1
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.0e-18 97.8 172 36.6
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.2e-17 94.4 177 33.9
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 4.9e-17 93.2 61 67.2
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 6.4e-17 92.8 65 69.2
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 6.0e-15 86.3 160 33.8
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.5e-13 81.6 171 29.8
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 1.8e-11 74.7 92 50.0


User provided reference genes

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