Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2515 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.7e-100 369.4 191 100.0
FAN09G3427 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.1e-91 337.4 187 89.3
FAN05G0221 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.7e-90 335.5 187 88.8
FvH4_6g22710 Fragaria vesca HOM05D002400 ORTHO05D002568 3.4e-85 318.5 184 91.3
FAN14G2794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.2e-84 315.8 184 89.1
FAN14G5260 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.9e-84 315.5 184 89.1
FvH4_6g33902 Fragaria vesca HOM05D002400 ORTHO05D002568 1.5e-45 186.8 144 66.7
FAN06G0647 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.6e-42 175.3 147 62.6
FAN06G2837 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.1e-41 171.8 147 61.9
FvH4_7g12363 Fragaria vesca HOM05D002400 ORTHO05D002568 2.8e-39 166.0 133 63.9
FvH4_6g05280 Fragaria vesca HOM05D002400 ORTHO05D002568 3.4e-37 159.1 152 57.2
FAN14G3389 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.4e-37 159.1 152 57.2
FAN14G5637 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-36 157.1 152 56.6
FAN05G2337 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.4e-35 153.7 152 55.3
FAN09G4054 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.4e-30 136.3 120 59.2
MD14G1025800 Malus domestica HOM05D002400 ORTHO05D002568 2.1e-26 123.2 142 45.1
RcHm_v2.0_Chr3g0474111 Rosa chinensis HOM05D002400 ORTHO05D002568 2.3e-25 119.8 140 45.0
MD14G1026600 Malus domestica HOM05D002400 ORTHO05D002568 2.0e-24 116.7 141 45.4
FvH4_6g33920 Fragaria vesca HOM05D002400 ORTHO05D002568 4.4e-24 115.5 141 41.1
FAN14G5626 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.4e-24 115.5 141 41.1
RcHm_v2.0_Chr3g0475391 Rosa chinensis HOM05D002400 ORTHO05D002568 9.7e-24 114.4 140 44.3
RcHm_v2.0_Chr3g0474091 Rosa chinensis HOM05D002400 ORTHO05D002568 2.8e-23 112.8 141 43.3
RcHm_v2.0_Chr3g0481121 Rosa chinensis HOM05D002400 ORTHO05D002568 4.8e-23 112.1 128 43.8
MD14G1157200 Malus domestica HOM05D002400 ORTHO05D002568 6.3e-23 111.7 153 44.4
Prupe.7G105000 Prunus persica HOM05D002400 ORTHO05D002568 1.1e-22 110.9 134 44.8
FvH4_5g26410 Fragaria vesca HOM05D002400 ORTHO05D002568 2.0e-21 106.7 138 39.1
FAN18G2424 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.7e-21 104.8 138 39.1
FvH4_5g26390 Fragaria vesca HOM05D002400 ORTHO05D002568 1.0e-20 104.4 138 39.1
RcHm_v2.0_Chr3g0475381 Rosa chinensis HOM05D002400 ORTHO05D002568 3.8e-20 102.4 139 41.7
RcHm_v2.0_Chr7g0205891 Rosa chinensis HOM05D002400 ORTHO05D002568 1.1e-19 100.9 141 40.4
vmacro12123 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 1.5e-19 100.5 140 41.4
MD14G1026000 Malus domestica HOM05D002400 ORTHO05D002568 1.9e-19 100.1 146 37.7
RcHm_v2.0_Chr3g0474191 Rosa chinensis HOM05D002400 ORTHO05D002568 7.2e-19 98.2 140 40.0
MD14G1024100 Malus domestica HOM05D002400 ORTHO05D002568 9.4e-19 97.8 142 39.4
Prupe.7G105500 Prunus persica HOM05D002400 ORTHO05D002568 9.4e-19 97.8 133 39.8
Prupe.7G105900 Prunus persica HOM05D002400 ORTHO05D002568 9.4e-19 97.8 135 42.2
MD04G1058800 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-18 97.4 138 39.9
MD14G1025600 Malus domestica HOM05D002400 ORTHO05D002568 1.2e-18 97.4 138 37.7
RcHm_v2.0_Chr3g0474001 Rosa chinensis HOM05D002400 ORTHO05D002568 1.6e-18 97.1 137 41.6
RcHm_v2.0_Chr7g0205961 Rosa chinensis HOM05D002400 ORTHO05D002568 1.6e-18 97.1 141 37.6
RcHm_v2.0_Chr3g0474031 Rosa chinensis HOM05D002400 ORTHO05D002568 2.1e-18 96.7 139 42.4
RcHm_v2.0_Chr3g0474171 Rosa chinensis HOM05D002400 ORTHO05D002568 2.7e-18 96.3 138 39.9
MD00G1221800 Malus domestica HOM05D002400 ORTHO05D002568 4.7e-18 95.5 135 40.0
RcHm_v2.0_Chr7g0217271 Rosa chinensis HOM05D002400 ORTHO05D002568 8.0e-18 94.7 130 37.7
FAN14G4887 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.4e-17 94.0 144 38.9
FAN02G4410 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.8e-17 93.6 137 41.6
FvH4_6g19020 Fragaria vesca HOM05D002400 ORTHO05D002568 2.3e-17 93.2 125 41.6
FAN09G0521 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.3e-17 93.2 140 37.9
FAN18G4571 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.0e-17 92.8 142 38.7
RcHm_v2.0_Chr3g0474021 Rosa chinensis HOM05D002400 ORTHO05D002568 3.0e-17 92.8 130 42.3
MD14G1025400 Malus domestica HOM05D002400 ORTHO05D002568 4.0e-17 92.4 139 39.6
Prupe.7G108600 Prunus persica HOM05D002400 ORTHO05D002568 4.0e-17 92.4 141 36.9
FvH4_6g19361 Fragaria vesca HOM05D002400 ORTHO05D002568 5.2e-17 92.0 146 37.7
MD14G1026300 Malus domestica HOM05D002400 ORTHO05D002568 5.2e-17 92.0 145 37.9
RcHm_v2.0_Chr3g0473961 Rosa chinensis HOM05D002400 ORTHO05D002568 5.2e-17 92.0 146 39.7
FvH4_6g19030 Fragaria vesca HOM05D002400 ORTHO05D002568 6.7e-17 91.7 139 41.0
FAN14G2096 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.8e-17 91.3 141 39.7
MD14G1026400 Malus domestica HOM05D002400 ORTHO05D002568 8.8e-17 91.3 145 37.2
Prupe.2G052100 Prunus persica HOM05D002400 ORTHO05D002568 8.8e-17 91.3 113 43.4
FvH4_5g20530 Fragaria vesca HOM05D002400 ORTHO05D002568 1.2e-16 90.9 142 38.0
FvH4_6g33960 Fragaria vesca HOM05D002400 ORTHO05D002568 1.2e-16 90.9 139 38.8
FAN05G4159 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-16 90.5 139 37.4
MD14G1025300 Malus domestica HOM05D002400 ORTHO05D002568 1.5e-16 90.5 139 38.8
FvH4_6g18954 Fragaria vesca HOM05D002400 ORTHO05D002568 2.6e-16 89.7 137 38.7
RcHm_v2.0_Chr3g0474041 Rosa chinensis HOM05D002400 ORTHO05D002568 2.6e-16 89.7 140 38.6
FvH4_6g18920 Fragaria vesca HOM05D002400 ORTHO05D002568 4.4e-16 89.0 139 36.7
FAN14G5714 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.4e-16 89.0 146 37.0
MD14G1025200 Malus domestica HOM05D002400 ORTHO05D002568 7.5e-16 88.2 132 40.9
RcHm_v2.0_Chr3g0473911 Rosa chinensis HOM05D002400 ORTHO05D002568 2.2e-15 86.7 144 36.1
vmacro05682 Vaccinium macrocarpon HOM05D002400 ORTHO05D002568 2.2e-15 86.7 143 38.5
FAN05G4425 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.8e-15 86.3 128 40.6
MD12G1026500 Malus domestica HOM05D002400 ORTHO05D002568 2.8e-15 86.3 116 37.9
MD12G1026800 Malus domestica HOM05D002400 ORTHO05D002568 2.8e-15 86.3 141 34.8
MD14G1025100 Malus domestica HOM05D002400 ORTHO05D002568 2.8e-15 86.3 140 34.3
FAN09G2665 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.8e-15 85.5 128 39.8
FAN18G1895 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.3e-15 85.1 143 36.4
MD14G1024900 Malus domestica HOM05D002400 ORTHO05D002568 6.3e-15 85.1 112 39.3
FAN08G1360 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.4e-14 83.2 145 33.8
FAN14G4031 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.4e-14 83.2 111 38.7
Prupe.7G106400 Prunus persica HOM05D002400 ORTHO05D002568 2.4e-14 83.2 147 38.1
FAN09G1471 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-14 82.8 137 39.4
FvH4_6g18952 Fragaria vesca HOM05D002400 ORTHO05D002568 5.3e-14 82.0 135 34.1
FAN18G0377 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.3e-14 82.0 141 32.6
MD12G1202000 Malus domestica HOM05D002400 ORTHO05D002568 5.3e-14 82.0 144 36.1
Prupe.6G311500 Prunus persica HOM05D002400 ORTHO05D002568 5.3e-14 82.0 127 40.9
FAN05G0305 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-13 80.9 80 50.0
FAN14G5775 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-13 80.9 149 36.2
FvH4_1g23521 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-13 80.5 143 37.1
FvH4_6g19010 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-13 80.5 128 39.1
FvH4_6g19040 Fragaria vesca HOM05D002400 ORTHO05D002568 1.6e-13 80.5 140 35.0
Prupe.7G106200 Prunus persica HOM05D002400 ORTHO05D002568 2.0e-13 80.1 109 41.3
MD14G1026700 Malus domestica HOM05D002400 ORTHO05D002568 3.5e-13 79.3 160 32.5
FvH4_6g19370 Fragaria vesca HOM05D002400 ORTHO05D002568 7.7e-13 78.2 144 35.4
FvH4_6g08300 Fragaria vesca HOM05D002400 ORTHO05D002568 1.3e-12 77.4 124 34.7
FAN14G3017 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.3e-12 77.4 124 34.7
FvH4_6g18982 Fragaria vesca HOM05D002400 ORTHO05D002568 2.9e-12 76.3 112 38.4
FAN08G0492 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.5e-12 75.1 118 36.4
Prupe.6G269600 Prunus persica HOM05D002400 ORTHO05D002568 8.5e-12 74.7 120 39.2
FAN18G0208 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.5e-11 73.9 139 34.5
FAN05G2917 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.9e-11 73.6 159 33.3
RcHm_v2.0_Chr3g0474161 Rosa chinensis HOM05D002400 ORTHO05D002568 1.9e-11 73.6 74 41.9
RcHm_v2.0_Chr3g0474141 Rosa chinensis HOM05D002400 ORTHO05D002568 3.2e-11 72.8 74 44.6
FvH4_5g32301 Fragaria vesca HOM05D002400 ORTHO05D002568 4.2e-11 72.4 140 35.0
FAN18G0503 Fragaria x ananassa HOM05D002400 ORTHO05D002568 7.2e-11 71.6 76 39.5
MD15G1012200 Malus domestica HOM05D002400 ORTHO05D002568 7.2e-11 71.6 120 37.5
FvH4_6g18950 Fragaria vesca HOM05D002400 ORTHO05D002568 9.4e-11 71.2 98 39.8
FAN05G1326 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-10 70.9 97 43.3
MD12G1025400 Malus domestica HOM05D002400 ORTHO05D002568 2.1e-10 70.1 131 34.4
RcHm_v2.0_Chr5g0068981 Rosa chinensis HOM05D002400 ORTHO05D002568 2.7e-10 69.7 175 26.9
FvH4_6g18911 Fragaria vesca HOM05D002400 ORTHO05D002568 3.6e-10 69.3 153 30.7
FAN02G2106 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.6e-10 69.3 115 35.7
FAN04G1411 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.6e-10 69.3 129 34.9
FAN14G3084 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.6e-10 69.3 75 44.0
Prupe.5G196300 Prunus persica HOM05D002400 ORTHO05D002568 3.6e-10 69.3 78 41.0
RcHm_v2.0_Chr5g0069001 Rosa chinensis HOM05D002400 ORTHO05D002568 3.6e-10 69.3 185 26.5
FAN06G5021 Fragaria x ananassa HOM05D002400 ORTHO05D002568 6.1e-10 68.6 107 36.4
FAN04G0043 Fragaria x ananassa HOM05D002400 ORTHO05D002568 8.0e-10 68.2 114 34.2
Cfa005419 Carpinus fangiana HOM05D002400 ORTHO05D002568 1.4e-09 67.4 137 35.0
MD14G1026200 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-09 67.4 77 41.6
MD04G1145400 Malus domestica HOM05D002400 ORTHO05D002568 1.8e-09 67.0 92 41.3
MD12G1201900 Malus domestica HOM05D002400 ORTHO05D002568 2.3e-09 66.6 143 31.5
RcHm_v2.0_Chr1g0330111 Rosa chinensis HOM05D002400 ORTHO05D002568 2.3e-09 66.6 146 34.2
FvH4_6g19051 Fragaria vesca HOM05D002400 ORTHO05D002568 5.2e-09 65.5 140 31.4
MD12G1217800 Malus domestica HOM05D002400 ORTHO05D002568 5.2e-09 65.5 143 33.6
Manes.09G032300 Manihot esculenta HOM05D002400 ORTHO05D002568 8.8e-09 64.7 117 33.3
QL02p059625 Quercus lobata HOM05D002400 ORTHO05D002568 8.8e-09 64.7 80 41.2
FAN13G3133 Fragaria x ananassa HOM05D002400 ORTHO05D002568 1.2e-08 64.3 92 38.0
Prupe.7G104800 Prunus persica HOM05D002400 ORTHO05D002568 3.4e-08 62.8 76 40.8
FAN08G3505 Fragaria x ananassa HOM05D002400 ORTHO05D002568 4.4e-08 62.4 113 38.9
Cfa005421 Carpinus fangiana HOM05D002400 ORTHO05D002568 7.5e-08 61.6 139 32.4
FvH4_7g04740 Fragaria vesca HOM05D002400 ORTHO05D002568 2.2e-07 60.1 81 43.2
FAN06G1414 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.2e-07 60.1 81 43.2
FAN03G0307 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.8e-07 59.7 81 38.3
FAN14G2111 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.8e-07 59.7 38 65.8
FAN19G0352 Fragaria x ananassa HOM05D002400 ORTHO05D002568 2.8e-07 59.7 76 39.5
MD12G1217700 Malus domestica HOM05D002400 ORTHO05D002568 4.8e-07 58.9 119 37.0
RcHm_v2.0_Chr3g0474131 Rosa chinensis HOM05D002400 ORTHO05D002568 4.8e-07 58.9 76 38.2
FvH4_6g18961 Fragaria vesca HOM05D002400 ORTHO05D002568 6.3e-07 58.5 89 36.0
Prupe.1G551800 Prunus persica HOM05D002400 ORTHO05D002568 1.1e-06 57.8 137 30.7
MD02G1269000 Malus domestica HOM05D002400 ORTHO05D002568 1.4e-06 57.4 79 40.5
FvH4_6g19090 Fragaria vesca HOM05D002400 ORTHO05D002568 3.1e-06 56.2 70 41.4
FAN04G3210 Fragaria x ananassa HOM05D002400 ORTHO05D002568 3.1e-06 56.2 92 34.8
Cfa005420 Carpinus fangiana HOM05D002400 ORTHO05D002568 4.1e-06 55.8 119 32.8
FAN14G5794 Fragaria x ananassa HOM05D002400 ORTHO05D002568 5.4e-06 55.5 70 41.4
Haze_04775 Corylus avellana HOM05D002400 ORTHO05D002568 7.0e-06 55.1 119 31.1
MD04G1145900 Malus domestica HOM05D002400 ORTHO05D002568 7.0e-06 55.1 80 40.0
FAN06G4070 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.1e-06 54.7 82 41.5
FAN10G1459 Fragaria x ananassa HOM05D002400 ORTHO05D002568 9.1e-06 54.7 43 55.8


User provided reference genes

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