Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2446 Fragaria x ananassa HOM05D008101 ORTHO05D010163 1.3e-70 269.6 136 100.0
FvH4_6g48300 Fragaria vesca HOM05D008101 ORTHO05D010163 2.9e-38 162.2 136 68.4
FAN09G0090 Fragaria x ananassa HOM05D008101 ORTHO05D010163 2.9e-38 162.2 136 68.4
FAN14G5148 Fragaria x ananassa HOM05D008101 ORTHO05D010163 1.1e-37 160.2 136 67.6
FAN09G1556 Fragaria x ananassa HOM05D008101 ORTHO05D010163 1.4e-32 143.3 80 95.0
RcHm_v2.0_Chr2g0167501 Rosa chinensis HOM05D008101 ORTHO05D010163 6.5e-14 81.3 48 91.7
RcHm_v2.0_Chr2g0167541 Rosa chinensis HOM05D008101 ORTHO05D010163 6.5e-14 81.3 48 91.7
RcHm_v2.0_Chr2g0167591 Rosa chinensis HOM05D008101 ORTHO05D010163 2.5e-13 79.3 48 89.6
FAN05G3293 Fragaria x ananassa HOM05D008101 ORTHO05D010163 5.5e-13 78.2 48 89.6
Dinv33773 Davidia involucrata HOM05D008101 ORTHO05D010163 7.9e-12 74.3 65 61.5
Manes.02G047600 Manihot esculenta HOM05D008101 ORTHO05D010163 2.6e-10 69.3 48 75.0
Thecc.04G085600 Theobroma cacao HOM05D008101 ORTHO05D010163 3.3e-10 68.9 48 72.9
FAN05G0138 Fragaria x ananassa HOM05D000576 ORTHO05D010163 4.4e-10 68.6 41 92.7
FAN23G1982 Fragaria x ananassa HOM05D000576 ORTHO05D010163 4.4e-10 68.6 41 92.7
CSS0047461 Camellia sinensis var. sinensis HOM05D008101 ORTHO05D010163 5.7e-10 68.2 48 68.8
Gohir.D07G212050 Gossypium hirsutum HOM05D008101 ORTHO05D010163 5.7e-10 68.2 48 70.8
Gorai.001G239800 Gossypium raimondii HOM05D008101 ORTHO05D010163 5.7e-10 68.2 48 70.8
Gohir.A07G206000 Gossypium hirsutum HOM05D008101 ORTHO05D010163 7.4e-10 67.8 48 68.8
CiPaw.03G024700 Carya illinoinensis HOM05D008101 ORTHO05D010163 1.7e-09 66.6 53 67.9
Cc07_g03530 Coffea canephora HOM05D008101 ORTHO05D010163 6.3e-09 64.7 48 68.8
Potri.010G234200 Populus trichocarpa HOM05D008101 ORTHO05D010163 6.3e-09 64.7 53 66.0
Migut.H00938 Erythranthe guttata HOM05D008101 ORTHO05D010163 7.0e-08 61.2 48 66.7
Nn4g23220 Nelumbo nucifera HOM05D008101 ORTHO05D010163 2.6e-07 59.3 48 62.5
Aqoxy3G03441 Aquilegia oxysepala HOM05D008101 ORTHO05D010163 3.4e-07 58.9 54 59.3
PGR083G0374 Punica granatum HOM05D008101 ORTHO05D010163 3.4e-07 58.9 53 60.4
Rhsim10G0036400 Rhododendron simsii HOM05D018356 ORTHO05D010163 4.5e-07 58.5 48 62.5
Prupe.3G265300 Prunus persica HOM05D008101 ORTHO05D010163 1.3e-06 57.0 53 58.5
SEGI_19148 Sequoiadendron giganteum HOM05D008101 ORTHO05D010163 1.3e-06 57.0 48 60.4
MD09G1053300 Malus domestica HOM05D008101 ORTHO05D010163 1.7e-06 56.6 48 62.5
Phvul.004G030000 Phaseolus vulgaris HOM05D008101 ORTHO05D010163 2.9e-06 55.8 48 60.4
Sed0001905 Sechium edule HOM05D008101 ORTHO05D010163 3.8e-06 55.5 48 62.5
CAN.G206.165 Capsicum annuum HOM05D008101 ORTHO05D010163 5.0e-06 55.1 53 56.6
Medtr6g012640 Medicago truncatula HOM05D008101 ORTHO05D010163 5.0e-06 55.1 48 62.5
Glyma.13G062100 Glycine max HOM05D008101 ORTHO05D010163 6.5e-06 54.7 48 62.5


User provided reference genes

Program Settings