Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.3e-66 256.1 121 100.0
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.8e-66 254.6 121 99.2
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.8e-66 254.6 121 99.2
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.8e-66 254.6 121 99.2
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 1.4e-65 252.7 120 98.3
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 2.7e-64 248.4 121 96.7
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 1.4e-52 209.5 120 82.5
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 2.4e-52 208.8 122 83.6
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 3.1e-52 208.4 122 81.1
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 4.1e-52 208.0 122 82.0
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 9.1e-52 206.8 122 83.6
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 9.1e-52 206.8 121 82.6
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 1.6e-51 206.1 122 82.8
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 2.7e-51 205.3 122 80.3
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 3.5e-51 204.9 121 82.6
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 4.5e-51 204.5 122 81.1
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 5.9e-51 204.1 121 81.0
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 7.7e-51 203.8 122 81.1
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 7.7e-51 203.8 121 81.0
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 7.7e-51 203.8 122 82.8
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 7.7e-51 203.8 121 81.8
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 1.0e-50 203.4 122 80.3
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.0e-50 203.4 122 78.7
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 1.0e-50 203.4 121 81.8
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 1.0e-50 203.4 121 81.8
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 2.2e-50 202.2 122 77.9
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 5.0e-50 201.1 122 77.9
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 6.5e-50 200.7 122 77.0
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 1.1e-49 199.9 122 77.0
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.5e-49 199.5 122 77.9
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 1.5e-49 199.5 122 77.0
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 1.9e-49 199.1 122 79.5
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 2.5e-49 198.7 122 77.0
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 2.5e-49 198.7 122 78.7
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 3.2e-49 198.4 122 78.7
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 3.2e-49 198.4 121 79.3
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 4.2e-49 198.0 122 77.9
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 5.5e-49 197.6 122 77.0
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 1.2e-48 196.4 122 77.9
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.6e-48 196.1 123 78.0
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 2.1e-48 195.7 122 77.0
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 2.7e-48 195.3 122 78.7
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 2.7e-48 195.3 122 77.0
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 4.7e-48 194.5 129 76.7
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 8.0e-48 193.7 120 77.5
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 1.4e-47 193.0 123 77.2
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 1.4e-47 193.0 122 74.6
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 2.3e-47 192.2 122 75.4
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 2.3e-47 192.2 122 76.2
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 3.0e-47 191.8 120 77.5
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 6.8e-47 190.7 122 76.2
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 6.8e-47 190.7 122 74.6
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 1.2e-46 189.9 120 75.8
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 4.4e-46 188.0 122 73.8
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 1.7e-45 186.0 122 73.0
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 6.3e-45 184.1 122 73.0
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 1.4e-44 183.0 118 74.6
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 3.1e-44 181.8 123 74.8
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 2.0e-43 179.1 136 68.4
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 2.7e-43 178.7 125 70.4
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 2.7e-43 178.7 120 74.2
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 5.9e-43 177.6 118 71.2
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 1.3e-42 176.4 121 71.9
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 1.7e-42 176.0 117 72.6
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 2.2e-42 175.6 118 72.0
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 2.9e-42 175.3 120 70.0
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 2.9e-42 175.3 118 72.0
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 5.0e-42 174.5 122 71.3
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 6.5e-42 174.1 118 72.0
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 6.5e-42 174.1 118 72.0
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 6.5e-42 174.1 118 72.0
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 6.5e-42 174.1 118 72.0
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 6.5e-42 174.1 125 68.8
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 1.5e-41 172.9 118 71.2
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 1.5e-41 172.9 118 71.2
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 4.2e-41 171.4 118 69.5
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 5.5e-41 171.0 118 68.6
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 7.2e-41 170.6 118 70.3
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 7.2e-41 170.6 118 70.3
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 1.6e-40 169.5 118 69.5
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 1.6e-40 169.5 118 69.5
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 1.6e-40 169.5 118 69.5
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 2.2e-37 159.1 132 63.6
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 1.1e-36 156.8 120 66.7
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.4e-36 155.6 94 77.7
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 4.1e-36 154.8 93 79.6
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 7.0e-36 154.1 117 64.1
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 7.0e-36 154.1 88 80.7
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 1.2e-35 153.3 93 78.5
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 1.2e-35 153.3 121 65.3
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 1.6e-35 152.9 91 79.1
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 2.0e-35 152.5 88 78.4
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 2.0e-35 152.5 88 78.4
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 2.0e-35 152.5 93 79.6
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 1.0e-34 150.2 90 77.8
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 1.7e-34 149.4 118 61.9
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 2.9e-34 148.7 91 78.0
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 2.9e-34 148.7 93 77.4
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 3.3e-33 145.2 91 79.1
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 5.6e-33 144.4 91 78.0
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 5.6e-33 144.4 102 69.6
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 9.5e-33 143.7 91 75.8
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 8.0e-32 140.6 88 73.9
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 3.0e-31 138.7 91 68.1
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 4.0e-31 138.3 102 65.7
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 5.2e-31 137.9 86 74.4
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 8.9e-31 137.1 75 85.3
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 1.2e-30 136.7 72 87.5
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.2e-30 136.7 103 67.0
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 2.0e-30 136.0 116 60.3
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 2.0e-30 136.0 116 60.3
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 2.0e-30 136.0 100 66.0
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 4.9e-29 131.3 91 67.0
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 3.0e-26 122.1 99 64.6
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 1.9e-25 119.4 67 79.1
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 6.2e-24 114.4 89 59.6
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 3.6e-16 88.6 54 75.9
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 8.9e-15 84.0 119 37.8
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 1.2e-14 83.6 111 41.4
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 1.3e-13 80.1 121 41.3
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 3.5e-11 72.0 146 32.9
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 3.0e-10 68.9 117 36.8
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 2.5e-09 65.9 30 90.0
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 5.2e-07 58.2 33 84.8


User provided reference genes

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