Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 7.5e-242 840.1 427 100.0
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.2e-239 832.8 427 99.1
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 8.6e-238 826.6 427 98.4
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.1e-237 826.2 427 98.1
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.3e-235 818.5 427 97.4
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 2.3e-227 792.0 428 93.9
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 2.6e-218 761.9 427 89.2
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 4.1e-208 728.0 429 84.1
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 1.6e-207 726.1 428 85.3
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 1.5e-205 719.5 433 82.4
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 4.0e-203 711.4 428 80.6
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 1.6e-199 699.5 427 81.0
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 1.9e-197 692.6 427 78.0
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 3.1e-195 685.3 432 79.9
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 4.0e-195 684.9 430 79.1
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 2.0e-194 682.6 429 79.3
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 2.2e-193 679.1 432 78.9
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 6.4e-193 677.6 429 79.3
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 8.4e-193 677.2 430 78.6
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 2.4e-192 675.6 427 77.8
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 2.1e-191 672.5 428 79.4
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 2.3e-190 669.1 427 77.0
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 1.5e-189 666.4 423 78.0
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 1.5e-189 666.4 427 77.3
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 3.3e-189 665.2 427 77.3
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 1.8e-187 659.4 425 73.6
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 2.2e-185 652.5 433 77.1
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 1.1e-184 650.2 427 75.2
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 3.2e-184 648.7 428 76.9
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 9.3e-184 647.1 431 71.9
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.7e-183 645.6 427 72.4
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 3.5e-183 645.2 427 72.4
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 6.0e-183 644.4 428 72.0
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 7.9e-183 644.0 427 73.8
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 2.3e-182 642.5 430 75.8
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 2.3e-182 642.5 429 76.0
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 3.0e-182 642.1 428 75.2
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 6.7e-182 641.0 427 74.5
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 1.5e-181 639.8 429 76.2
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 2.5e-181 639.0 433 74.1
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 5.6e-181 637.9 427 74.0
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 1.1e-179 633.6 429 73.7
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 1.8e-179 632.9 429 76.5
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 3.1e-179 632.1 434 72.8
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 4.0e-179 631.7 432 73.4
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 5.3e-179 631.3 432 73.1
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 1.2e-178 630.2 427 73.1
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 4.5e-178 628.2 423 72.3
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 7.6e-178 627.5 432 72.0
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.8e-177 625.2 428 70.8
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 3.8e-177 625.2 428 73.1
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 1.1e-176 623.6 429 72.3
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 1.9e-176 622.9 429 73.9
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 3.2e-176 622.1 432 71.5
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 5.5e-176 621.3 405 77.8
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 2.7e-175 619.0 427 71.4
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 4.6e-175 618.2 453 72.0
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 3.3e-173 612.1 413 70.5
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 1.5e-170 603.2 437 68.6
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 7.7e-170 600.9 413 70.0
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 1.2e-167 593.6 435 70.3
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 6.7e-166 587.8 448 65.0
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 7.4e-165 584.3 429 67.4
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 2.2e-164 582.8 429 69.0
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 3.7e-164 582.0 421 72.7
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 2.4e-163 579.3 428 66.6
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 1.5e-162 576.6 427 66.5
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 4.5e-162 575.1 409 73.3
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 2.9e-161 572.4 354 79.9
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 9.4e-160 567.4 433 69.3
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 3.0e-158 562.4 396 71.2
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 1.7e-156 556.6 431 63.8
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 6.3e-156 554.7 459 61.7
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 4.1e-155 552.0 383 74.4
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 5.3e-155 551.6 427 64.9
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 7.0e-155 551.2 428 62.6
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 1.2e-154 550.4 428 62.9
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 3.4e-154 548.9 428 62.9
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 7.7e-154 547.7 428 64.3
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 1.7e-153 546.6 438 66.4
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 4.2e-152 542.0 410 70.0
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 5.5e-152 541.6 416 63.9
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 1.2e-151 540.4 427 62.3
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 1.2e-151 540.4 428 62.4
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 2.7e-151 539.3 428 62.1
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 1.4e-150 537.0 433 62.1
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 1.4e-150 537.0 329 78.7
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 4.4e-149 531.9 427 61.6
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 1.7e-148 530.0 414 62.6
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 3.7e-148 528.9 426 66.7
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 1.1e-147 527.3 428 60.7
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.1e-144 517.3 416 63.5
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 9.4e-144 514.2 419 64.4
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 5.2e-142 508.4 403 65.0
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 5.3e-139 498.4 429 58.3
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.3e-137 493.8 425 59.3
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 1.7e-137 493.4 397 61.7
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 1.7e-137 493.4 400 60.2
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 1.6e-135 486.9 403 60.8
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 1.3e-124 450.7 326 69.0
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 4.1e-115 419.1 264 79.5
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 2.5e-112 409.8 304 70.1
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.7e-108 397.1 420 50.7
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 3.5e-98 362.8 319 55.5
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 8.9e-94 348.2 398 48.7
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 6.6e-89 332.0 424 44.8
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 1.9e-88 330.5 320 56.6
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 3.3e-88 329.7 218 70.2
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 5.4e-83 312.4 423 43.0
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 2.0e-77 293.9 305 50.2
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.9e-75 287.3 200 65.5
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 4.2e-67 259.6 156 80.8
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 8.7e-57 225.3 166 60.2
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 2.8e-55 220.3 130 80.8
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 6.3e-55 219.2 135 72.6
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.5e-45 188.0 223 45.3
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 2.8e-39 167.2 132 61.4
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.3e-39 166.0 132 61.4
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 8.2e-39 165.6 98 76.5
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 2.8e-31 140.6 82 84.1
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 2.0e-29 134.4 92 82.6
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 4.5e-29 133.3 134 56.0
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 1.9e-27 127.9 109 62.4
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 7.2e-19 99.4 95 55.8
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 2.4e-14 84.3 53 67.9
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 5.5e-11 73.2 67 53.7
QL05p054729 Quercus lobata HOM05D006079 ORTHO05D338210 8.9e-09 65.9 60 61.7


User provided reference genes

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