Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2394 Fragaria x ananassa HOM05D008289 ORTHO05D008832 1.3e-76 289.7 145 100.0
FAN17G3081 Fragaria x ananassa HOM05D008289 ORTHO05D008832 8.6e-57 223.8 121 95.0
FAN03G0874 Fragaria x ananassa HOM05D008289 ORTHO05D008832 4.3e-56 221.5 123 93.5
FAN24G1385 Fragaria x ananassa HOM05D008289 ORTHO05D008832 1.2e-55 219.9 119 95.8
FAN10G1319 Fragaria x ananassa HOM05D029472 ORTHO05D035378 2.4e-54 215.7 123 91.9
FAN12G2521 Fragaria x ananassa HOM05D008289 ORTHO05D008832 1.9e-40 169.5 126 77.0
FAN10G3820 Fragaria x ananassa HOM05D008289 ORTHO05D008832 9.3e-35 150.6 123 71.5
FAN04G1810 Fragaria x ananassa HOM05D008289 ORTHO05D008832 7.9e-34 147.5 112 75.9
FAN07G1832 Fragaria x ananassa HOM05D008289 ORTHO05D008832 7.6e-29 131.0 129 65.9
FAN14G4579 Fragaria x ananassa HOM05D008289 ORTHO05D008832 2.9e-28 129.0 129 62.8
FAN21G0083 Fragaria x ananassa HOM05D008289 ORTHO05D008832 3.5e-26 122.1 115 65.2
FAN09G3319 Fragaria x ananassa HOM05D008289 ORTHO05D008832 2.4e-22 109.4 97 71.1
FAN12G2061 Fragaria x ananassa HOM05D008289 ORTHO05D008832 6.9e-22 107.8 97 70.1
FAN08G3060 Fragaria x ananassa HOM05D008289 ORTHO05D008832 4.2e-19 98.6 123 51.2
FAN10G3269 Fragaria x ananassa HOM05D008289 ORTHO05D008832 9.3e-19 97.4 88 68.2
FAN21G1123 Fragaria x ananassa HOM05D008289 ORTHO05D008832 9.3e-19 97.4 123 50.4
FAN09G0274 Fragaria x ananassa HOM05D008289 ORTHO05D008832 1.6e-18 96.7 123 50.4
FAN24G3117 Fragaria x ananassa HOM05D008289 ORTHO05D008832 3.5e-18 95.5 123 50.4
FAN13G0662 Fragaria x ananassa HOM05D000763 ORTHO05D000599 4.6e-18 95.1 123 50.4
FAN20G0556 Fragaria x ananassa HOM05D008289 ORTHO05D008832 4.6e-18 95.1 123 50.4
FAN25G0330 Fragaria x ananassa HOM05D008289 ORTHO05D008832 4.6e-18 95.1 123 50.4
FAN28G0145 Fragaria x ananassa HOM05D008289 ORTHO05D008832 4.6e-18 95.1 123 50.4
FAN03G1046 Fragaria x ananassa HOM05D008289 ORTHO05D008832 7.9e-18 94.4 123 49.6
FAN08G0315 Fragaria x ananassa HOM05D008289 ORTHO05D008832 1.8e-17 93.2 123 49.6
FAN02G3951 Fragaria x ananassa HOM05D008289 ORTHO05D008832 3.9e-17 92.0 85 63.5
FAN03G2208 Fragaria x ananassa HOM05D008289 ORTHO05D008832 3.9e-17 92.0 139 44.6
FAN09G2640 Fragaria x ananassa HOM05D008289 ORTHO05D008832 3.9e-17 92.0 81 69.1
FAN10G0160 Fragaria x ananassa HOM05D008289 ORTHO05D008832 3.9e-17 92.0 81 69.1
FAN18G2965 Fragaria x ananassa HOM05D008289 ORTHO05D008832 3.9e-17 92.0 81 69.1
FAN02G3667 Fragaria x ananassa HOM05D008289 ORTHO05D008832 8.7e-17 90.9 121 49.6
FAN10G3647 Fragaria x ananassa HOM05D008289 ORTHO05D008832 8.7e-17 90.9 121 49.6
FAN21G3635 Fragaria x ananassa HOM05D008289 ORTHO05D008832 8.7e-17 90.9 81 69.1
FAN16G0043 Fragaria x ananassa HOM05D003375 ORTHO05D004719 1.9e-16 89.7 122 49.2
FAN12G0140 Fragaria x ananassa HOM05D008289 ORTHO05D008832 4.3e-16 88.6 81 67.9
FAN07G0424 Fragaria x ananassa HOM05D008289 ORTHO05D008832 5.7e-16 88.2 129 48.8
FAN05G5066 Fragaria x ananassa HOM05D008289 ORTHO05D008832 7.4e-16 87.8 53 83.0
FAN10G3344 Fragaria x ananassa HOM05D000053 ORTHO05D000035 9.7e-16 87.4 60 76.7
FAN09G3559 Fragaria x ananassa HOM05D008289 ORTHO05D008832 2.4e-14 82.8 43 93.0
FAN09G0646 Fragaria x ananassa HOM05D000514 ORTHO05D000222 2.0e-13 79.7 123 46.3
FAN19G2895 Fragaria x ananassa HOM05D008289 ORTHO05D008832 7.7e-13 77.8 121 46.3
FAN25G2303 Fragaria x ananassa HOM05D000343 ORTHO05D000975 6.5e-12 74.7 124 44.4
FAN06G1288 Fragaria x ananassa HOM05D002077 ORTHO05D006729 1.1e-11 73.9 123 43.1
FAN02G3417 Fragaria x ananassa HOM05D008289 ORTHO05D008832 4.2e-11 72.0 77 61.0
FAN16G0108 Fragaria x ananassa HOM05D008289 ORTHO05D008832 4.2e-11 72.0 123 42.3
PGR031G0445 Punica granatum HOM05D000029 ORTHO05D000854 5.5e-11 71.6 74 56.8
Sp5g30940 Schrenkiella parvula HOM05D000029 ORTHO05D000854 9.4e-11 70.9 131 42.7
DCAR_022991 Daucus carota HOM05D000029 ORTHO05D000854 1.2e-10 70.5 131 39.7
FAN08G2238 Fragaria x ananassa HOM05D000432 ORTHO05D000320 1.6e-10 70.1 148 37.2
FAN21G3335 Fragaria x ananassa HOM05D014134 ORTHO05D008832 1.6e-10 70.1 75 61.3
DCAR_014030 Daucus carota HOM05D000029 ORTHO05D008832 2.1e-10 69.7 144 36.8
FAN22G1772 Fragaria x ananassa HOM05D008289 ORTHO05D008832 2.1e-10 69.7 123 41.5
FAN28G1614 Fragaria x ananassa HOM05D000127 ORTHO05D008832 2.1e-10 69.7 129 41.9
BcaC08g47324 Brassica carinata HOM05D000029 ORTHO05D000854 2.7e-10 69.3 131 43.5
C06p49770 Brassica napus HOM05D000029 ORTHO05D000854 2.7e-10 69.3 131 43.5
BolC6t40016H Brassica oleracea HOM05D000029 ORTHO05D000854 2.7e-10 69.3 131 43.5
COL.COLO4_26126 Corchorus olitorius HOM05D000029 ORTHO05D000854 4.6e-10 68.6 131 42.7
FAN15G2138 Fragaria x ananassa HOM05D008289 ORTHO05D008832 6.1e-10 68.2 73 61.6
Rhsim08G0088900 Rhododendron simsii HOM05D000029 ORTHO05D000854 1.0e-09 67.4 126 43.7
Solyc03g043770.4 Solanum lycopersicum HOM05D000029 ORTHO05D000854 1.0e-09 67.4 108 45.4
FvH4_1g18710 Fragaria vesca HOM05D000029 ORTHO05D000854 2.3e-09 66.2 72 61.1
FAN05G2775 Fragaria x ananassa HOM05D008289 ORTHO05D008832 2.3e-09 66.2 72 61.1
FAN19G1243 Fragaria x ananassa HOM05D000029 ORTHO05D000854 2.3e-09 66.2 72 61.1
FAN23G0122 Fragaria x ananassa HOM05D008289 ORTHO05D008832 2.3e-09 66.2 72 61.1
FAN23G2276 Fragaria x ananassa HOM05D008289 ORTHO05D008832 2.3e-09 66.2 72 61.1
FAN26G0320 Fragaria x ananassa HOM05D008289 ORTHO05D008832 2.3e-09 66.2 72 61.1
FAN26G1377 Fragaria x ananassa HOM05D008289 ORTHO05D008832 2.3e-09 66.2 72 61.1
FAN26G1630 Fragaria x ananassa HOM05D000029 ORTHO05D000854 2.3e-09 66.2 72 61.1
FAN28G0029 Fragaria x ananassa HOM05D000029 ORTHO05D000854 2.3e-09 66.2 72 61.1
Sopen03g007630 Solanum pennellii HOM05D000029 ORTHO05D000854 2.3e-09 66.2 108 44.4
A07p41350 Brassica napus HOM05D000029 ORTHO05D000854 3.0e-09 65.9 131 42.0
BraA07t31668Z Brassica rapa HOM05D000029 ORTHO05D000854 3.0e-09 65.9 131 42.0
PGSC0003DMG400016685 Solanum tuberosum HOM05D000029 ORTHO05D000854 3.0e-09 65.9 108 45.4
FAN18G1705 Fragaria x ananassa HOM05D008289 ORTHO05D008832 3.9e-09 65.5 72 59.7
Hma1.2p1_0733F.1_g210220 Hydrangea macrophylla HOM05D000029 ORTHO05D000854 5.1e-09 65.1 139 36.0
CARHR069240 Cardamine hirsuta HOM05D000029 ORTHO05D000854 6.7e-09 64.7 132 42.4
FAN23G0319 Fragaria x ananassa HOM05D000029 ORTHO05D000854 6.7e-09 64.7 69 62.3
vmacro22432 Vaccinium macrocarpon HOM05D000029 ORTHO05D000854 6.7e-09 64.7 130 40.8
FAN10G2414 Fragaria x ananassa HOM05D011417 ORTHO05D008832 2.0e-08 63.2 72 58.3
Zm00001eb009640 Zea mays HOM05D000029 ORTHO05D000854 2.0e-08 63.2 129 39.5
AL2G35810 Arabidopsis lyrata HOM05D000029 ORTHO05D000854 2.5e-08 62.8 131 39.7
Dinv31865 Davidia involucrata HOM05D000029 ORTHO05D000854 2.5e-08 62.8 131 35.1
FAN02G1101 Fragaria x ananassa HOM05D008289 ORTHO05D008832 2.5e-08 62.8 91 49.5
Gorai.009G269700 Gossypium raimondii HOM05D000029 ORTHO05D000854 4.3e-08 62.0 130 37.7
Aa31LG4G6020 Aethionema arabicum HOM05D000029 ORTHO05D000854 5.7e-08 61.6 131 41.2
FAN26G2647 Fragaria x ananassa HOM05D008289 ORTHO05D008832 5.7e-08 61.6 126 41.3
FAN18G3461 Fragaria x ananassa HOM05D000107 ORTHO05D002484 7.4e-08 61.2 43 72.1
RcHm_v2.0_Chr2g0109581 Rosa chinensis HOM05D000029 ORTHO05D000854 9.7e-08 60.8 75 57.3
AagrBONN_evm.TU.Sc2ySwM_369.538 Anthoceros agrestis HOM05D000106 ORTHO05D001887 1.7e-07 60.1 72 45.8
FAN21G1784 Fragaria x ananassa HOM05D008289 ORTHO05D008832 1.7e-07 60.1 104 42.3
FAN17G2374 Fragaria x ananassa HOM05D008289 ORTHO05D008832 2.2e-07 59.7 63 57.1
Thhalv10018069m.g Eutrema salsugineum HOM05D000029 ORTHO05D000854 2.8e-07 59.3 131 39.7
Lj4C21T5 Lonicera japonica HOM05D000029 ORTHO05D000854 4.8e-07 58.5 80 42.5
Gohir.A03G215400 Gossypium hirsutum HOM05D000029 ORTHO05D000854 6.3e-07 58.2 130 35.4
THA.LOC104811419 Tarenaya hassleriana HOM05D000029 ORTHO05D000854 6.3e-07 58.2 131 38.9
PSO541G5153 Papaver somniferum HOM05D000029 ORTHO05D000854 8.2e-07 57.8 130 36.2
CiPaw.07G147700 Carya illinoinensis HOM05D000029 ORTHO05D008832 1.1e-06 57.4 66 47.0
Sabra01G0169600 Salix brachista HOM05D000029 ORTHO05D000854 1.4e-06 57.0 129 35.7
THA.LOC104813786 Tarenaya hassleriana HOM05D000029 ORTHO05D000854 1.8e-06 56.6 131 39.7
arahy.Tifrunner.gnm1.ann1.8BA7G9 Arachis hypogaea HOM05D000029 ORTHO05D000854 2.4e-06 56.2 132 33.3
Gohir.D05G258350 Gossypium hirsutum HOM05D000029 ORTHO05D000854 2.4e-06 56.2 71 43.7
Dinv19416 Davidia involucrata HOM05D000029 ORTHO05D000854 3.1e-06 55.8 136 33.8
SGA_v2.0_scaffold178G39524 Striga asiatica HOM05D001042 ORTHO05D007836 3.1e-06 55.8 59 52.5
CSS0049239 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D000854 4.1e-06 55.5 133 33.8
Nn7g37556 Nelumbo nucifera HOM05D000029 ORTHO05D008832 4.1e-06 55.5 109 39.4
Duzib041G0705 Durio zibethinus HOM05D000029 ORTHO05D000854 5.3e-06 55.1 122 37.7
Potri.004G223900 Populus trichocarpa HOM05D000029 ORTHO05D000854 6.9e-06 54.7 129 34.9
CiPaw.07G040300 Carya illinoinensis HOM05D000029 ORTHO05D001395 9.1e-06 54.3 136 36.0
CiPaw.08G147400 Carya illinoinensis HOM05D000053 ORTHO05D008832 9.1e-06 54.3 94 40.4
DCAR_014393 Daucus carota HOM05D000029 ORTHO05D006810 9.1e-06 54.3 129 34.1
Medtr2g005810 Medicago truncatula HOM05D000029 ORTHO05D000854 9.1e-06 54.3 130 31.5


User provided reference genes

Program Settings