Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2280 Fragaria x ananassa HOM05D017210 ORTHO05D019186 3.5e-161 571.6 301 100.0
FAN05G5824 Fragaria x ananassa HOM05D017210 ORTHO05D019186 4.7e-158 561.2 301 98.0
FvH4_6g15970 Fragaria vesca HOM05D017210 ORTHO05D019186 1.1e-154 550.1 302 95.7
FAN14G0387 Fragaria x ananassa HOM05D017210 ORTHO05D019186 7.1e-154 547.4 302 95.4
FAN09G0879 Fragaria x ananassa HOM05D017210 ORTHO05D019186 3.6e-142 508.4 278 95.3
RcHm_v2.0_Chr3g0469671 Rosa chinensis HOM05D017210 ORTHO05D019186 1.0e-112 410.6 296 75.3
RcHm_v2.0_Chr4g0407791 Rosa chinensis HOM05D017210 ORTHO05D019186 1.0e-80 304.3 284 62.7
RcHm_v2.0_Chr3g0487681 Rosa chinensis HOM05D017210 ORTHO05D019186 2.2e-78 296.6 294 54.8
Prupe.1G280200 Prunus persica HOM05D003448 ORTHO05D004028 2.1e-20 104.0 303 34.0
CANSAT64G1203 Cannabis sativa HOM05D003448 ORTHO05D004028 6.7e-19 99.0 311 35.0
CiPaw.05G129300 Carya illinoinensis HOM05D003448 ORTHO05D004028 7.4e-18 95.5 312 32.7
FvH4_4g30670 Fragaria vesca HOM05D003448 ORTHO05D004028 1.4e-16 91.3 307 33.2
Manes.05G106600 Manihot esculenta HOM05D003448 ORTHO05D004028 1.8e-16 90.9 300 32.0
RcHm_v2.0_Chr4g0439081 Rosa chinensis HOM05D003448 ORTHO05D004028 2.4e-16 90.5 310 30.3
RcHm_v2.0_Chr4g0439091 Rosa chinensis HOM05D003448 ORTHO05D004028 1.7e-14 84.3 295 31.5
Cfa008923 Carpinus fangiana HOM05D003448 ORTHO05D004028 2.2e-14 84.0 319 31.0
Cpa.g.sc1.73 Carica papaya HOM05D003448 ORTHO05D004028 2.9e-14 83.6 303 31.7
Cc11_g12520 Coffea canephora HOM05D003448 ORTHO05D004028 3.8e-14 83.2 302 29.5
CSS0040782 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 1.1e-13 81.6 314 32.5
QL03p069872 Quercus lobata HOM05D003448 ORTHO05D004028 1.4e-13 81.3 300 31.3
Dinv34100 Davidia involucrata HOM05D003448 ORTHO05D004028 7.1e-13 79.0 294 32.0
Atru.chr11.1710 Acer truncatum HOM05D003448 ORTHO05D004028 2.1e-12 77.4 306 29.7
Manes.01G031900 Manihot esculenta HOM05D003448 ORTHO05D004028 2.7e-12 77.0 299 30.1
Thecc.02G338900 Theobroma cacao HOM05D003448 ORTHO05D004028 2.7e-12 77.0 304 29.6
unitig_8.g3960 Utricularia gibba HOM05D003448 ORTHO05D004028 4.6e-12 76.3 291 30.2
BcaC04g21492 Brassica carinata HOM05D003448 ORTHO05D004028 6.0e-12 75.9 297 26.3
C09p31190 Brassica napus HOM05D003448 ORTHO05D004028 6.0e-12 75.9 297 26.3
BolC9t55975H Brassica oleracea HOM05D003448 ORTHO05D004028 6.0e-12 75.9 297 26.3
Duzib248G1355 Durio zibethinus HOM05D003448 ORTHO05D004028 1.0e-11 75.1 312 29.5
BcaB07g30674 Brassica carinata HOM05D003448 ORTHO05D004028 2.3e-11 73.9 310 26.8
A09p24360 Brassica napus HOM05D003448 ORTHO05D004028 2.3e-11 73.9 288 25.7
BraA09t38029Z Brassica rapa HOM05D003448 ORTHO05D004028 2.3e-11 73.9 288 25.7
Migut.E00067 Erythranthe guttata HOM05D003448 ORTHO05D004028 3.0e-11 73.6 305 29.8
Atru.chr11.1709 Acer truncatum HOM05D003448 ORTHO05D004028 3.9e-11 73.2 302 30.5
A02p33350 Brassica napus HOM05D003448 ORTHO05D004028 3.9e-11 73.2 315 28.6
THA.LOC104801852 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 5.1e-11 72.8 301 28.9
Gorai.013G089800 Gossypium raimondii HOM05D003448 ORTHO05D004028 6.7e-11 72.4 291 28.9
Hma1.2p1_0357F.1_g134310 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 8.7e-11 72.0 304 29.3
Gohir.D02G127600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 1.1e-10 71.6 316 26.6
Gorai.005G143200 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.1e-10 71.6 316 26.6
PGSC0003DMG400002851 Solanum tuberosum HOM05D003448 ORTHO05D004028 1.1e-10 71.6 316 28.2
BcaB07g30304 Brassica carinata HOM05D003448 ORTHO05D004028 1.9e-10 70.9 301 28.6
CANSAT64G0892 Cannabis sativa HOM05D003448 ORTHO05D004028 2.5e-10 70.5 311 27.7
Sabra08G0068600 Salix brachista HOM05D003448 ORTHO05D004028 2.5e-10 70.5 307 30.0
MSTRG.2328 Avicennia marina HOM05D003448 ORTHO05D004028 5.6e-10 69.3 313 26.5
BcaC03g17206 Brassica carinata HOM05D003448 ORTHO05D004028 1.3e-09 68.2 292 27.4
Lj4g0008688 Lotus japonicus HOM05D003448 ORTHO05D004028 1.6e-09 67.8 280 28.6
Sopen04g001550 Solanum pennellii HOM05D003448 ORTHO05D004028 4.8e-09 66.2 311 26.4
Sp2g14260 Schrenkiella parvula HOM05D003448 ORTHO05D004028 8.2e-09 65.5 313 27.2
Gorai.013G089600 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.1e-08 65.1 289 27.0
Oeu021088.1 Olea europaea HOM05D003448 ORTHO05D004028 1.1e-08 65.1 280 28.2
EL10Ac6g13273 Beta vulgaris HOM05D003448 ORTHO05D004028 1.4e-08 64.7 303 29.4
Gohir.D13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 2.4e-08 63.9 289 27.0
Lsat_1_v5_gn_3_51801 Lactuca sativa HOM05D003448 ORTHO05D004028 2.4e-08 63.9 289 27.0
Lsat_1_v5_gn_8_49320 Lactuca sativa HOM05D003448 ORTHO05D004028 2.4e-08 63.9 287 27.9
Potri.008G091600 Populus trichocarpa HOM05D003448 ORTHO05D004028 2.4e-08 63.9 303 30.0
Glyma.20G030300 Glycine max HOM05D003448 ORTHO05D004028 3.1e-08 63.5 291 29.2
SalBow8G5474 Salvia bowleyana HOM05D003448 ORTHO05D004028 3.1e-08 63.5 295 25.8
BcaC03g17209 Brassica carinata HOM05D003448 ORTHO05D004028 4.0e-08 63.2 220 29.1
Nitab4.5_0007467g0030 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.0e-08 63.2 307 29.0
Ciclev10033637m.g Citrus clementina HOM05D003448 ORTHO05D004028 5.3e-08 62.8 319 29.5
Duzib251G0906 Durio zibethinus HOM05D003448 ORTHO05D004028 5.3e-08 62.8 297 27.9
Glyma.20G030600 Glycine max HOM05D003448 ORTHO05D004028 5.3e-08 62.8 297 27.6
SGA_v2.0_scaffold287G47147 Striga asiatica HOM05D003448 ORTHO05D004028 9.0e-08 62.0 314 28.3
Gorai.013G089900 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.2e-07 61.6 296 30.1
Nitab4.5_0004471g0060 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.2e-07 61.6 298 28.9
Lsat_1_v5_gn_4_10361 Lactuca sativa HOM05D003448 ORTHO05D004028 1.5e-07 61.2 296 28.7
Gohir.D13G078600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 2.0e-07 60.8 296 29.1
Gohir.A13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 3.4e-07 60.1 284 27.1
Medtr4g082550 Medicago truncatula HOM05D003448 ORTHO05D004028 3.4e-07 60.1 307 26.4
Psat7g154240 Pisum sativum HOM05D003448 ORTHO05D004028 3.4e-07 60.1 296 27.4
Nitab4.5_0000391g0120 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.5e-07 59.7 307 28.0
Potri.010G163300 Populus trichocarpa HOM05D003448 ORTHO05D004028 4.5e-07 59.7 305 28.5
Lalb_Chr05g0220171 Lupinus albus HOM05D003448 ORTHO05D004028 1.3e-06 58.2 299 27.8
Hund25204 Selenicereus undatus HOM05D003448 ORTHO05D004028 1.3e-06 58.2 305 29.2
Nitab4.5_0000391g0160 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.2e-06 57.4 321 26.8
Oeu057654.1 Olea europaea HOM05D003448 ORTHO05D004028 3.8e-06 56.6 268 28.4
TAR371G1243 Trochodendron aralioides HOM05D003448 ORTHO05D004028 3.8e-06 56.6 285 30.5
VMungo0251G1914 Vigna mungo HOM05D003448 ORTHO05D004028 3.8e-06 56.6 294 28.9
Ca_25944_v3 Cicer arietinum L. HOM05D003448 ORTHO05D004028 4.9e-06 56.2 297 26.9
PGR016G0005 Punica granatum HOM05D003448 ORTHO05D004028 8.4e-06 55.5 300 28.0
PGR119G2543 Punica granatum HOM05D003448 ORTHO05D004028 8.4e-06 55.5 300 28.0
SalBow2G2694 Salvia bowleyana HOM05D003448 ORTHO05D004028 8.4e-06 55.5 299 26.1


User provided reference genes

Program Settings