Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G2193 Fragaria x ananassa HOM05D000664 ORTHO05D000491 7.1e-86 320.5 151 100.0
FvH4_6g52880 Fragaria vesca HOM05D000664 ORTHO05D000491 1.9e-22 109.8 136 47.1
FAN02G4514 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.2e-22 108.6 112 52.7
FAN14G0754 Fragaria x ananassa HOM05D000664 ORTHO05D000491 9.4e-22 107.5 137 45.3
FvH4_6g52871 Fragaria vesca HOM05D000664 ORTHO05D000491 2.8e-18 95.9 107 48.6
RcHm_v2.0_Chr2g0174881 Rosa chinensis HOM05D000664 ORTHO05D000491 9.1e-17 90.9 110 43.6
RcHm_v2.0_Chr2g0174951 Rosa chinensis HOM05D000664 ORTHO05D000491 9.1e-17 90.9 110 43.6
FAN14G0409 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.9e-16 88.2 150 34.7
FvH4_6g53610 Fragaria vesca HOM05D000664 ORTHO05D000491 1.0e-15 87.4 130 36.2
FvH4_6g53660 Fragaria vesca HOM05D000664 ORTHO05D000491 2.9e-15 85.9 116 44.0
FAN14G3303 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.8e-15 85.5 118 45.8
FvH4_6g52931 Fragaria vesca HOM05D000664 ORTHO05D000491 8.5e-15 84.3 109 43.1
FvH4_6g53620 Fragaria vesca HOM05D000664 ORTHO05D000491 8.5e-15 84.3 116 43.1
FAN05G5626 Fragaria x ananassa HOM05D000664 ORTHO05D000491 8.5e-15 84.3 116 43.1
FvH4_6g52062 Fragaria vesca HOM05D000664 ORTHO05D000491 1.1e-14 84.0 108 43.5
FvH4_6g52080 Fragaria vesca HOM05D000664 ORTHO05D000491 1.1e-14 84.0 108 43.5
FAN05G1881 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.1e-14 84.0 108 43.5
FAN09G2913 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.1e-14 84.0 109 41.3
FAN02G1575 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.5e-14 83.6 110 42.7
FAN09G3965 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.5e-14 83.6 108 42.6
FAN02G0955 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.5e-14 82.8 116 42.2
FAN09G2634 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.5e-14 82.8 108 42.6
FvH4_2g35950 Fragaria vesca HOM05D000664 ORTHO05D000491 4.2e-14 82.0 130 40.8
FAN27G0857 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.2e-14 82.0 130 40.8
FAN14G2391 Fragaria x ananassa HOM05D005860 ORTHO05D006977 7.2e-14 81.3 109 40.4
FAN05G0017 Fragaria x ananassa HOM05D000664 ORTHO05D000491 9.4e-14 80.9 110 41.8
FAN09G3133 Fragaria x ananassa HOM05D000664 ORTHO05D000491 9.4e-14 80.9 109 41.3
FAN14G1625 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.6e-13 79.0 109 40.4
FAN14G4425 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.6e-13 79.0 110 40.0
FvH4_6g53001 Fragaria vesca HOM05D000664 ORTHO05D000491 4.7e-13 78.6 109 40.4
FvH4_6g53021 Fragaria vesca HOM05D000664 ORTHO05D000491 6.1e-13 78.2 111 44.1
FAN09G2451 Fragaria x ananassa HOM05D000664 ORTHO05D000491 6.1e-13 78.2 108 43.5
FAN09G4765 Fragaria x ananassa HOM05D000664 ORTHO05D000491 6.1e-13 78.2 109 41.3
FvH4_6g52610 Fragaria vesca HOM05D000664 ORTHO05D000491 1.8e-12 76.6 138 37.0
FvH4_6g52861 Fragaria vesca HOM05D000664 ORTHO05D000491 1.8e-12 76.6 120 36.7
FvH4_6g52830 Fragaria vesca HOM05D000664 ORTHO05D000491 3.0e-12 75.9 120 35.8
FAN05G0407 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.0e-12 75.9 109 42.2
FAN14G3826 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.0e-12 75.9 120 35.8
FAN14G3348 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.2e-12 75.1 109 38.5
RcHm_v2.0_Chr4g0396041 Rosa chinensis HOM05D000664 ORTHO05D000491 5.2e-12 75.1 109 41.3
FvH4_6g52941 Fragaria vesca HOM05D000664 ORTHO05D000491 8.8e-12 74.3 121 42.1
RcHm_v2.0_Chr2g0174451 Rosa chinensis HOM05D000664 ORTHO05D000491 8.8e-12 74.3 123 36.6
FAN21G1670 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.5e-11 73.6 120 34.2
RcHm_v2.0_Chr2g0174531 Rosa chinensis HOM05D000664 ORTHO05D000491 4.4e-11 72.0 118 37.3
FAN05G0730 Fragaria x ananassa HOM05D000664 ORTHO05D000491 9.7e-11 70.9 129 33.3
FvH4_3g43790 Fragaria vesca HOM05D000664 ORTHO05D000491 1.3e-10 70.5 120 33.3
FvH4_6g52942 Fragaria vesca HOM05D000664 ORTHO05D000491 1.3e-10 70.5 130 40.0
FAN14G3989 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.3e-10 70.5 130 40.0
FAN09G3500 Fragaria x ananassa HOM05D002893 ORTHO05D003387 1.7e-10 70.1 144 36.1
FAN14G3142 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.7e-10 70.1 144 36.1
MD16G1240000 Malus domestica HOM05D000664 ORTHO05D000491 2.2e-10 69.7 122 36.9
Atru.chr1.895 Acer truncatum HOM05D000664 ORTHO05D000491 3.7e-10 68.9 114 34.2
RcHm_v2.0_Chr2g0174701 Rosa chinensis HOM05D000664 ORTHO05D000491 3.7e-10 68.9 112 37.5
FAN09G0982 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.1e-09 67.4 105 42.9
FAN27G2908 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.3e-09 65.1 106 39.6
Thecc.03G149500 Theobroma cacao HOM05D000664 ORTHO05D000491 5.3e-09 65.1 126 31.7
FvH4_2g35920 Fragaria vesca HOM05D000664 ORTHO05D000491 7.0e-09 64.7 105 40.0
FAN02G0794 Fragaria x ananassa HOM05D000664 ORTHO05D000491 7.0e-09 64.7 109 36.7
FAN14G2089 Fragaria x ananassa HOM05D000664 ORTHO05D000491 9.1e-09 64.3 98 40.8
FAN05G1066 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.2e-08 63.9 120 35.8
QL11p009388 Quercus lobata HOM05D000664 ORTHO05D000491 1.2e-08 63.9 127 33.1
CiPaw.15G154900 Carya illinoinensis HOM05D000664 ORTHO05D000491 1.6e-08 63.5 128 32.8
FAN09G2903 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.6e-08 63.5 107 38.3
FAN09G4012 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.0e-08 63.2 111 35.1
FAN17G0010 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.7e-08 62.8 128 37.5
FvH4_4g06370 Fragaria vesca HOM05D000664 ORTHO05D000491 4.5e-08 62.0 128 36.7
FAN12G1944 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.5e-08 62.0 128 36.7
Hma1.2p1_0432F.1_g152025 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 5.9e-08 61.6 117 31.6
Prupe.1G066400 Prunus persica HOM05D000664 ORTHO05D000491 7.7e-08 61.2 129 33.3
Duzib068G1024 Durio zibethinus HOM05D000664 ORTHO05D000491 1.0e-07 60.8 129 29.5
FAN22G1828 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.0e-07 60.8 128 36.7
Gohir.D07G047500 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.0e-07 60.8 125 33.6
MD13G1235400 Malus domestica HOM05D000664 ORTHO05D000491 1.0e-07 60.8 128 35.2
COL.COLO4_37345 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.3e-07 60.5 127 34.6
Gorai.001G050600 Gossypium raimondii HOM05D000664 ORTHO05D000491 1.3e-07 60.5 121 32.2
FAN07G2627 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.7e-07 60.1 127 37.0
RcHm_v2.0_Chr4g0396501 Rosa chinensis HOM05D000664 ORTHO05D000491 1.7e-07 60.1 92 38.0
GSVIVG01017506001 Vitis vinifera HOM05D000664 ORTHO05D000491 1.7e-07 60.1 113 34.5
Dinv16863 Davidia involucrata HOM05D000664 ORTHO05D000491 2.2e-07 59.7 131 34.4
Gohir.D12G199200 Gossypium hirsutum HOM05D000664 ORTHO05D000491 2.2e-07 59.7 129 31.8
FvH4_2g35940 Fragaria vesca HOM05D000664 ORTHO05D000491 3.8e-07 58.9 109 35.8
Gorai.008G214400 Gossypium raimondii HOM05D000664 ORTHO05D000491 3.8e-07 58.9 129 31.0
FvH4_4g06360 Fragaria vesca HOM05D000664 ORTHO05D000491 5.0e-07 58.5 111 36.9
Ciclev10005096m.g Citrus clementina HOM05D000664 ORTHO05D000491 6.5e-07 58.2 109 33.0
Dinv26464 Davidia involucrata HOM05D000664 ORTHO05D000491 6.5e-07 58.2 130 31.5
FAN14G1724 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.1e-06 57.4 98 36.7
Rhsim03G0162100 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.9e-06 56.6 126 33.3
RcHm_v2.0_Chr4g0388661 Rosa chinensis HOM05D000664 ORTHO05D000491 1.9e-06 56.6 135 30.4
FvH4_1g12890 Fragaria vesca HOM05D000664 ORTHO05D000491 2.5e-06 56.2 153 28.8
FAN14G0160 Fragaria x ananassa HOM05D000664 ORTHO05D198915 2.5e-06 56.2 27 92.6
FAN22G0195 Fragaria x ananassa HOM05D000664 ORTHO05D035745 2.5e-06 56.2 119 36.1
PSO170G0618 Papaver somniferum HOM05D000664 ORTHO05D000491 3.2e-06 55.8 129 29.5
RcHm_v2.0_Chr4g0388801 Rosa chinensis HOM05D000664 ORTHO05D000491 3.2e-06 55.8 153 28.1
Ciclev10005086m.g Citrus clementina HOM05D000664 ORTHO05D000491 4.2e-06 55.5 127 31.5
Lj8C46T5 Lonicera japonica HOM05D000664 ORTHO05D000491 4.2e-06 55.5 127 31.5
Actinidia13606 Actinidia chinensis HOM05D000664 ORTHO05D000491 5.5e-06 55.1 120 34.2
Actinidia31674 Actinidia chinensis HOM05D000664 ORTHO05D000491 5.5e-06 55.1 130 33.1
COL.COLO4_37361 Corchorus olitorius HOM05D000664 ORTHO05D000491 5.5e-06 55.1 128 31.2
MD16G1240100 Malus domestica HOM05D000664 ORTHO05D000491 5.5e-06 55.1 127 31.5
RcHm_v2.0_Chr4g0399001 Rosa chinensis HOM05D000664 ORTHO05D000491 5.5e-06 55.1 136 29.4
Ciclev10006867m.g Citrus clementina HOM05D000664 ORTHO05D000491 7.2e-06 54.7 122 32.8
PSO063G1615 Papaver somniferum HOM05D000664 ORTHO05D000491 7.2e-06 54.7 129 27.9
FAN12G3310 Fragaria x ananassa HOM05D000664 ORTHO05D000491 9.4e-06 54.3 136 31.6
Rhsim03G0162000 Rhododendron simsii HOM05D000664 ORTHO05D000491 9.4e-06 54.3 130 32.3


User provided reference genes

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