Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1810 Fragaria x ananassa HOM05D004580 ORTHO05D005917 8.3e-125 450.3 212 100.0
FvH4_6g23990 Fragaria vesca HOM05D004580 ORTHO05D005917 3.5e-115 418.3 198 99.0
FAN14G1039 Fragaria x ananassa HOM05D004580 ORTHO05D005917 3.5e-115 418.3 198 99.0
FAN05G1019 Fragaria x ananassa HOM05D004580 ORTHO05D005917 8.6e-114 413.7 198 97.5
FvH4_5g29380 Fragaria vesca HOM05D004580 ORTHO05D005917 8.9e-111 403.7 197 95.4
RcHm_v2.0_Chr7g0243401 Rosa chinensis HOM05D004580 ORTHO05D005917 8.9e-111 403.7 198 94.9
MD08G1227100 Malus domestica HOM05D004580 ORTHO05D005917 7.5e-110 400.6 201 90.0
RcHm_v2.0_Chr1g0321971 Rosa chinensis HOM05D004580 ORTHO05D005917 1.9e-108 396.0 198 92.9
Prupe.1G521000 Prunus persica HOM05D004580 ORTHO05D005917 6.0e-107 391.0 198 89.9
MD15G1419400 Malus domestica HOM05D004580 ORTHO05D005917 5.6e-105 384.4 198 89.9
Duzib041G0230 Durio zibethinus HOM05D004580 ORTHO05D005917 7.3e-105 384.0 198 88.9
Gohir.D06G035500 Gossypium hirsutum HOM05D004580 ORTHO05D005917 2.8e-104 382.1 198 88.4
Gorai.010G039500 Gossypium raimondii HOM05D004580 ORTHO05D005917 2.8e-104 382.1 198 88.4
Cpa.g.sc36.160 Carica papaya HOM05D004580 ORTHO05D005917 1.1e-103 380.2 200 87.5
Thecc.08G104300 Theobroma cacao HOM05D004580 ORTHO05D005917 1.8e-103 379.4 198 87.9
Aa31LG9G14650 Aethionema arabicum HOM05D004580 ORTHO05D005917 2.3e-103 379.0 198 88.9
CSS0036827 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 2.3e-103 379.0 198 88.4
CSS0039091 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 2.3e-103 379.0 198 88.4
Gohir.A06G034900 Gossypium hirsutum HOM05D004580 ORTHO05D005917 2.3e-103 379.0 198 87.9
QL12p037342 Quercus lobata HOM05D004580 ORTHO05D005917 2.3e-103 379.0 198 87.9
Lj3P847T35 Lonicera japonica HOM05D004580 ORTHO05D005917 6.8e-103 377.5 204 86.8
Atru.chr13.1137 Acer truncatum HOM05D004580 ORTHO05D005917 8.9e-103 377.1 198 87.4
Manes.18G065933 Manihot esculenta HOM05D004580 ORTHO05D005917 8.9e-103 377.1 198 87.9
VMungo1127G0933 Vigna mungo HOM05D004580 ORTHO05D005917 2.6e-102 375.6 199 85.4
ClCG08G011200 Citrullus lanatus HOM05D004580 ORTHO05D005917 3.4e-102 375.2 200 87.0
Haze_22292 Corylus avellana HOM05D004580 ORTHO05D005917 3.4e-102 375.2 199 86.9
Gohir.D05G227500 Gossypium hirsutum HOM05D004580 ORTHO05D005917 3.4e-102 375.2 198 87.4
COL.COLO4_12032 Corchorus olitorius HOM05D004580 ORTHO05D005917 4.4e-102 374.8 198 87.4
PGR031G1028 Punica granatum HOM05D004580 ORTHO05D005917 7.6e-102 374.0 198 86.9
Sed0008659 Sechium edule HOM05D004580 ORTHO05D005917 7.6e-102 374.0 198 83.8
BcaB01g02823 Brassica carinata HOM05D004580 ORTHO05D005917 9.9e-102 373.6 196 87.2
BcaB01g02835 Brassica carinata HOM05D004580 ORTHO05D005917 9.9e-102 373.6 196 87.2
Duzib093G0091 Durio zibethinus HOM05D004580 ORTHO05D005917 9.9e-102 373.6 198 86.9
Sp6g08660 Schrenkiella parvula HOM05D004580 ORTHO05D005917 9.9e-102 373.6 198 87.4
Lsat_1_v5_gn_4_64561 Lactuca sativa HOM05D004580 ORTHO05D005917 1.3e-101 373.2 197 87.3
Cfa013658 Carpinus fangiana HOM05D004580 ORTHO05D005917 2.2e-101 372.5 198 86.9
BcaC04g20934 Brassica carinata HOM05D004580 ORTHO05D005917 2.9e-101 372.1 198 85.9
C09p37760 Brassica napus HOM05D004580 ORTHO05D005917 2.9e-101 372.1 198 85.9
BolC9t56609H Brassica oleracea HOM05D004580 ORTHO05D005917 2.9e-101 372.1 198 85.9
Hma1.2p1_0044F.1_g026170 Hydrangea macrophylla HOM05D004580 ORTHO05D005917 3.7e-101 371.7 199 86.4
AT4G08960 Arabidopsis thaliana HOM05D004580 ORTHO05D005917 4.9e-101 371.3 198 85.9
THA.LOC104813113 Tarenaya hassleriana HOM05D004580 ORTHO05D005917 4.9e-101 371.3 198 87.4
AL6G41550 Arabidopsis lyrata HOM05D004580 ORTHO05D005917 6.4e-101 370.9 198 85.9
ClCG11G014220 Citrullus lanatus HOM05D004580 ORTHO05D005917 6.4e-101 370.9 198 84.8
Gorai.009G235200 Gossypium raimondii HOM05D004580 ORTHO05D005917 6.4e-101 370.9 198 86.4
Carub.0006s2756 Capsella rubella HOM05D004580 ORTHO05D005917 8.3e-101 370.5 198 86.4
CANSAT25G2089 Cannabis sativa HOM05D004580 ORTHO05D005917 1.1e-100 370.2 198 86.4
Eucgr.B00032 Eucalyptus grandis HOM05D004580 ORTHO05D005917 1.9e-100 369.4 198 86.9
TWI12G1022 Tripterygium wilfordii HOM05D004580 ORTHO05D005917 1.9e-100 369.4 198 85.4
Glyma.12G087751 Glycine max HOM05D004580 ORTHO05D005917 2.4e-100 369.0 199 85.4
TAR625G1360 Trochodendron aralioides HOM05D004580 ORTHO05D005917 3.2e-100 368.6 198 85.4
BcaB01g02381 Brassica carinata HOM05D004580 ORTHO05D005917 4.1e-100 368.2 194 87.1
CARHR259970 Cardamine hirsuta HOM05D004580 ORTHO05D005917 4.1e-100 368.2 198 85.9
MELO3C003564.2 Cucumis melo HOM05D004580 ORTHO05D005917 4.1e-100 368.2 197 85.3
CsaV3_3G047600 Cucumis sativus L. HOM05D004580 ORTHO05D005917 7.1e-100 367.5 198 84.3
Oeu036766.1 Olea europaea HOM05D004580 ORTHO05D005917 9.2e-100 367.1 199 84.4
Ah.01g012710 Amaranthus hybridus HOM05D004580 ORTHO05D005917 1.6e-99 366.3 204 81.9
Phvul.011G102600 Phaseolus vulgaris HOM05D004580 ORTHO05D005917 1.6e-99 366.3 198 83.8
Sed0021368 Sechium edule HOM05D004580 ORTHO05D005917 1.6e-99 366.3 198 84.8
MSTRG.2066 Avicennia marina HOM05D004580 ORTHO05D005917 2.7e-99 365.5 200 81.5
BcaC01g04745 Brassica carinata HOM05D004580 ORTHO05D005917 2.7e-99 365.5 198 85.9
CSS0011251 Camellia sinensis var. sinensis HOM05D004580 ORTHO05D005917 2.7e-99 365.5 198 85.4
CiPaw.07G178200 Carya illinoinensis HOM05D004580 ORTHO05D005917 4.6e-99 364.8 198 85.4
Dinv17643 Davidia involucrata HOM05D004580 ORTHO05D005917 4.6e-99 364.8 198 85.9
Migut.E00684 Erythranthe guttata HOM05D004580 ORTHO05D005917 4.6e-99 364.8 200 81.5
Ciclev10001487m.g Citrus clementina HOM05D004580 ORTHO05D005917 7.8e-99 364.0 198 84.8
arahy.Tifrunner.gnm1.ann1.UE4JHM Arachis hypogaea HOM05D004580 ORTHO05D005917 1.0e-98 363.6 198 84.8
TAR381G0740 Trochodendron aralioides HOM05D004580 ORTHO05D005917 1.0e-98 363.6 198 83.3
arahy.Tifrunner.gnm1.ann1.T3Z839 Arachis hypogaea HOM05D004580 ORTHO05D005917 1.7e-98 362.8 207 81.6
MELO3C011036.2 Cucumis melo HOM05D004580 ORTHO05D005917 1.7e-98 362.8 198 84.8
Nn5g30036 Nelumbo nucifera HOM05D004580 ORTHO05D005917 1.7e-98 362.8 199 82.4
ECA236G1081 Erigeron canadensis HOM05D004580 ORTHO05D005917 2.3e-98 362.5 199 84.4
A03p28330 Brassica napus HOM05D004580 ORTHO05D005917 3.0e-98 362.1 197 86.3
CsaV3_2G029780 Cucumis sativus L. HOM05D004580 ORTHO05D005917 3.0e-98 362.1 198 84.8
Psat7g188520 Pisum sativum HOM05D004580 ORTHO05D005917 3.0e-98 362.1 198 81.8
C03p34240 Brassica napus HOM05D004580 ORTHO05D005917 3.9e-98 361.7 197 85.8
BolC3t15733H Brassica oleracea HOM05D004580 ORTHO05D005917 3.9e-98 361.7 197 85.8
Thhalv10028722m.g Eutrema salsugineum HOM05D004580 ORTHO05D005917 3.9e-98 361.7 199 85.4
Glyma.11G184601 Glycine max HOM05D004580 ORTHO05D005917 5.1e-98 361.3 194 85.1
Nn5g30292 Nelumbo nucifera HOM05D004580 ORTHO05D005917 5.1e-98 361.3 198 84.3
BraA03t12037Z Brassica rapa HOM05D004580 ORTHO05D005917 6.6e-98 360.9 197 86.3
AUR62017729 Chenopodium quinoa HOM05D004580 ORTHO05D005917 8.6e-98 360.5 194 83.0
Medtr4g053370 Medicago truncatula HOM05D004580 ORTHO05D005917 8.6e-98 360.5 198 83.8
Actinidia04333 Actinidia chinensis HOM05D004580 ORTHO05D005917 1.1e-97 360.1 198 82.3
MBI02_g02175_MAGBIO Magnolia biondii HOM05D004580 ORTHO05D005917 1.1e-97 360.1 196 84.7
PSO541G6503 Papaver somniferum HOM05D004580 ORTHO05D005917 1.9e-97 359.4 198 83.3
Nitab4.5_0000069g0120 Nicotiana tabacum HOM05D004580 ORTHO05D005917 2.5e-97 359.0 197 82.2
Sabra05G0123100 Salix brachista HOM05D004580 ORTHO05D005917 2.5e-97 359.0 204 82.8
Ca_19393_v3 Cicer arietinum L. HOM05D004580 ORTHO05D005917 3.3e-97 358.6 197 83.2
vmacro15988 Vaccinium macrocarpon HOM05D004580 ORTHO05D005917 3.3e-97 358.6 201 81.6
Aqoxy7G04111 Aquilegia oxysepala HOM05D004580 ORTHO05D005917 4.3e-97 358.2 198 83.8
Nitab4.5_0013217g0010 Nicotiana tabacum HOM05D004580 ORTHO05D005917 5.6e-97 357.8 197 82.2
PGSC0003DMG402016396 Solanum tuberosum HOM05D004580 ORTHO05D005917 9.6e-97 357.1 198 80.3
EL10Ac9g22979 Beta vulgaris HOM05D004580 ORTHO05D005917 1.6e-96 356.3 190 84.2
Potri.005G162900 Populus trichocarpa HOM05D004580 ORTHO05D005917 2.1e-96 355.9 198 83.8
Sopen01g003800 Solanum pennellii HOM05D004580 ORTHO05D005917 2.1e-96 355.9 198 80.8
Lj3g0026440 Lotus japonicus HOM05D004580 ORTHO05D005917 3.6e-96 355.1 198 81.8
HanXRQChr04g0124871 Helianthus annuus HOM05D004580 ORTHO05D005917 4.7e-96 354.8 198 80.8
SGA_v2.0_scaffold358G49840 Striga asiatica HOM05D004580 ORTHO05D005917 4.7e-96 354.8 198 80.8
Potri.002G099000 Populus trichocarpa HOM05D004580 ORTHO05D005917 1.8e-95 352.8 199 82.4
MSTRG.13678 Avicennia marina HOM05D004580 ORTHO05D005917 2.4e-95 352.4 200 79.0
Solyc01g008280.4 Solanum lycopersicum HOM05D004580 ORTHO05D005917 2.4e-95 352.4 196 80.6
MBI05_g34722_MAGBIO Magnolia biondii HOM05D004580 ORTHO05D005917 4.0e-95 351.7 198 81.3
Rhsim09G0069400 Rhododendron simsii HOM05D004580 ORTHO05D005917 6.8e-95 350.9 191 84.3
ATR0706G027 Amborella trichopoda HOM05D004580 ORTHO05D005917 8.9e-95 350.5 198 82.8
Sc10g0006870 Simmondsia chinensis HOM05D004580 ORTHO05D005917 1.2e-94 350.1 190 83.2
unitig_8.g3592 Utricularia gibba HOM05D004580 ORTHO05D005917 1.2e-94 350.1 200 78.0
Hund08631 Selenicereus undatus HOM05D004580 ORTHO05D005917 2.0e-94 349.4 203 78.3
Sabra02G0077800 Salix brachista HOM05D004580 ORTHO05D005917 4.4e-94 348.2 210 78.6
DCAR_023183 Daucus carota HOM05D004580 ORTHO05D005917 5.8e-94 347.8 198 82.3
Gohir.A05G224950 Gossypium hirsutum HOM05D004580 ORTHO05D005917 7.6e-94 347.4 198 83.3
PSO781G0322 Papaver somniferum HOM05D004580 ORTHO05D005917 9.9e-94 347.1 198 78.8
DCAR_002598 Daucus carota HOM05D004580 ORTHO05D005917 2.9e-93 345.5 196 81.6
Lalb_Chr03g0028011 Lupinus albus HOM05D004580 ORTHO05D005917 2.9e-93 345.5 198 79.8
CDE05G3003 Ceratophyllum demersum HOM05D004580 ORTHO05D005917 1.4e-92 343.2 198 77.3
SEGI_24357 Sequoiadendron giganteum HOM05D004580 ORTHO05D005917 6.0e-91 337.8 198 77.3
PSO541G6453 Papaver somniferum HOM05D004580 ORTHO05D005917 6.6e-90 334.3 197 77.7
A09p29790 Brassica napus HOM05D004580 ORTHO05D005917 1.3e-88 330.1 179 86.0
Mapoly0004s0171 Marchantia polymorpha HOM05D004580 ORTHO05D005917 1.6e-88 329.7 196 76.0
Zm00001eb372770 Zea mays HOM05D004580 ORTHO05D005917 1.6e-88 329.7 195 79.5
Os06g0219800 Oryza sativa ssp. japonica HOM05D004580 ORTHO05D005917 2.1e-88 329.3 194 78.4
HPP92_004278 Vanilla planifolia HOM05D004580 ORTHO05D005917 2.8e-88 328.9 185 82.7
Pp3c2_670 Physcomitrium patens HOM05D004580 ORTHO05D005917 3.6e-88 328.6 198 76.8
BraA09t38542Z Brassica rapa HOM05D004580 ORTHO05D005917 4.8e-88 328.2 179 85.5
Pp3c1_41950 Physcomitrium patens HOM05D004580 ORTHO05D005917 5.3e-87 324.7 198 76.3
AagrBONN_evm.TU.Sc2ySwM_117.2526 Anthoceros agrestis HOM05D004580 ORTHO05D005917 3.4e-86 322.0 201 73.6
GSVIVG01009068001 Vitis vinifera HOM05D004580 ORTHO05D005917 5.8e-86 321.2 198 77.3
Peaxi162Scf00021g02317 Petunia axillaris HOM05D004580 ORTHO05D005917 5.1e-82 308.1 163 84.7
CAN.G282.45 Capsicum annuum HOM05D004580 ORTHO05D005917 3.3e-81 305.4 231 63.2
SHI33348 Sapria himalayana HOM05D004580 ORTHO05D005917 7.3e-81 304.3 190 74.2
HPP92_016361 Vanilla planifolia HOM05D004580 ORTHO05D005917 9.6e-81 303.9 176 79.0
Nn1g05417 Nelumbo nucifera HOM05D004580 ORTHO05D005917 8.1e-80 300.8 172 79.7
SMO329G0013 Selaginella moellendorffii HOM05D004580 ORTHO05D005917 6.4e-77 291.2 188 69.1
CBR_g45439 Chara braunii HOM05D004580 ORTHO05D005917 1.4e-76 290.0 184 72.8
FAN18G2046 Fragaria x ananassa HOM05D004580 ORTHO05D005917 7.1e-76 287.7 143 93.7
FAN24G1342 Fragaria x ananassa HOM05D004580 ORTHO05D005917 3.7e-72 275.4 197 71.6
TPR.G17228 Trifolium pratense HOM05D004580 ORTHO05D005917 1.3e-66 256.9 137 86.9
Cre13.g580650 Chlamydomonas reinhardtii HOM05D004580 ORTHO05D005917 1.5e-65 253.4 185 62.7
FvH4_2g11953 Fragaria vesca HOM05D004580 ORTHO05D000007 5.7e-65 251.5 189 68.8
PRCOL_00005481 Prasinoderma coloniale HOM05D004580 ORTHO05D005917 2.7e-59 232.6 194 55.2
MCO01G633 Micromonas commoda HOM05D004580 ORTHO05D005917 1.8e-55 219.9 187 54.5
Lalb_Chr19g0136591 Lupinus albus HOM05D004580 ORTHO05D005917 1.2e-51 207.2 198 54.0
Cfa021829 Carpinus fangiana HOM05D004580 ORTHO05D011646 9.7e-49 197.6 193 48.7
GSVIVG01009057001 Vitis vinifera HOM05D004580 ORTHO05D005917 2.4e-47 193.0 132 72.7
SEGI_19435 Sequoiadendron giganteum HOM05D004580 ORTHO05D005917 1.0e-42 177.6 109 71.6
FAN24G1075 Fragaria x ananassa HOM05D004580 ORTHO05D005917 4.4e-41 172.2 148 62.2
Cfa001645 Carpinus fangiana HOM05D004580 ORTHO05D020348 5.7e-41 171.8 207 44.4
Aqoxy6G00748 Aquilegia oxysepala HOM05D004580 ORTHO05D005917 2.3e-26 123.2 74 77.0
FvH4_4g06652 Fragaria vesca HOM05D004580 ORTHO05D000031 1.7e-24 117.1 57 94.7
Nn3g16512 Nelumbo nucifera HOM05D004580 ORTHO05D005917 5.4e-23 112.1 64 82.8
CDE05G0498 Ceratophyllum demersum HOM05D004580 ORTHO05D005917 8.0e-19 98.2 64 59.4
Oeu013193.1 Olea europaea HOM05D004580 ORTHO05D005917 1.8e-07 60.5 33 81.8
Nitab4.5_0006124g0020 Nicotiana tabacum HOM05D000011 ORTHO05D036898 3.5e-06 56.2 43 62.8


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