Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.7e-203 711.8 370 100.0
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.3e-194 682.2 370 95.7
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.9e-193 679.1 371 95.7
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 2.3e-191 672.2 370 94.9
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.1e-172 610.1 377 85.4
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.3e-162 575.9 313 96.5
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 1.4e-132 476.9 403 65.3
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 1.4e-122 443.7 404 62.4
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 7.2e-116 421.4 407 61.7
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 1.3e-96 357.5 371 56.3
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 2.2e-96 356.7 381 57.2
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.1e-95 354.4 371 57.4
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 1.7e-88 330.5 391 52.2
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 1.6e-86 323.9 384 51.8
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 1.6e-86 323.9 376 54.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.5e-84 317.4 331 57.7
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.5e-84 317.4 382 53.7
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 7.3e-84 315.1 377 53.1
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.2e-83 314.3 384 50.5
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 3.4e-81 306.2 234 70.9
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 5.8e-81 305.4 386 51.0
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 7.5e-81 305.1 380 50.3
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 3.2e-79 299.7 237 68.8
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 4.1e-79 299.3 387 49.9
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 5.4e-79 298.9 251 65.3
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 1.6e-78 297.4 314 55.7
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.6e-78 297.4 377 50.1
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 2.0e-78 297.0 390 49.5
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 3.5e-78 296.2 394 48.0
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 1.0e-77 294.7 397 47.6
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.7e-77 293.9 408 47.5
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.9e-76 290.4 393 47.1
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 3.3e-76 289.7 411 48.2
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 4.3e-76 289.3 387 48.8
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 5.6e-76 288.9 382 49.0
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 9.5e-76 288.1 376 48.1
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 9.5e-76 288.1 270 62.2
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 1.2e-75 287.7 364 48.9
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.6e-75 287.3 406 45.3
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.6e-75 287.3 357 51.8
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 4.7e-75 285.8 379 48.3
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 6.2e-75 285.4 416 45.0
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.1e-75 285.0 315 53.7
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 2.0e-73 280.4 374 48.9
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 4.4e-73 279.3 314 56.1
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.8e-73 278.9 228 65.8
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 7.5e-73 278.5 251 62.5
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 1.3e-72 277.7 323 52.3
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 2.9e-72 276.6 232 64.7
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.7e-72 276.2 228 65.4
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 4.9e-72 275.8 251 61.0
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 1.1e-71 274.6 227 66.5
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-71 274.6 228 65.8
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-71 274.6 225 65.8
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.4e-71 274.2 228 65.4
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 3.2e-71 273.1 246 60.6
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 6.0e-70 268.9 233 60.9
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 6.0e-70 268.9 377 45.9
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.7e-69 267.3 229 63.8
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.7e-69 267.3 377 46.2
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 3.0e-69 266.5 229 63.3
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 3.0e-69 266.5 267 57.7
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 5.1e-69 265.8 396 46.5
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 8.6e-69 265.0 293 53.2
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.2e-67 261.2 229 62.9
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.3e-66 256.9 413 42.4
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 6.8e-66 255.4 232 62.5
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.2e-65 254.6 293 50.5
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.6e-65 253.4 396 44.2
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 4.4e-65 252.7 401 43.9
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 7.6e-65 251.9 299 51.5
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 8.4e-64 248.4 283 54.1
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 1.9e-63 247.3 414 43.2
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 1.2e-62 244.6 320 49.1
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 3.5e-62 243.0 339 49.3
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 6.0e-62 242.3 367 44.7
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.0e-61 241.5 267 52.1
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 2.3e-61 240.4 226 58.4
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 3.0e-61 240.0 276 50.7
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 6.6e-61 238.8 276 50.4
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 1.1e-60 238.0 266 51.9
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 1.9e-60 237.3 246 54.1
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 7.3e-60 235.3 289 49.1
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.1e-59 233.8 240 55.8
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 2.8e-59 233.4 265 49.8
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 3.6e-59 233.0 241 55.6
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 4.7e-59 232.6 245 54.7
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 4.7e-59 232.6 266 51.9
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 1.1e-58 231.5 254 52.8
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 1.1e-58 231.5 254 52.8
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 3.1e-58 229.9 267 51.7
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 4.0e-58 229.6 189 63.0
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 6.8e-58 228.8 186 66.7
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 7.6e-57 225.3 276 49.6
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 9.3e-55 218.4 354 44.1
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.0e-53 214.9 221 54.8
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 3.6e-51 206.5 138 73.9
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.2e-49 201.4 245 49.4
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.3e-48 198.0 168 67.3
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.7e-48 197.6 331 38.1
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 3.2e-47 193.4 319 45.1
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.3e-45 188.0 189 57.7
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 6.6e-45 185.7 157 66.2
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.6e-43 181.0 184 55.4
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 2.7e-38 163.7 283 40.3
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.7e-35 153.3 192 49.5
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.0e-32 145.2 207 47.8
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.3e-32 144.8 177 52.0
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 8.4e-32 142.1 263 40.7
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 1.1e-31 141.7 180 40.6
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 7.9e-30 135.6 101 65.3
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.3e-29 134.8 117 65.0
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 7.9e-22 109.0 215 32.1
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 7.4e-20 102.4 63 79.4
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 1.7e-16 91.3 234 28.2
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 1.5e-12 78.2 55 69.1
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 2.5e-12 77.4 198 31.3
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 3.7e-11 73.6 56 66.1
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 1.2e-09 68.6 168 30.4
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.5e-07 60.8 193 34.7


User provided reference genes

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