Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1724 Fragaria x ananassa HOM05D002035 ORTHO05D002032 1.2e-137 493.0 234 100.0
FAN14G5962 Fragaria x ananassa HOM05D002035 ORTHO05D002032 1.4e-77 293.5 189 75.1
FAN14G0966 Fragaria x ananassa HOM05D002035 ORTHO05D002032 1.3e-51 207.2 216 58.8
FvH4_6g30801 Fragaria vesca HOM05D002035 ORTHO05D002032 1.7e-30 137.1 102 68.6
FvH4_6g30802 Fragaria vesca HOM05D002035 ORTHO05D002032 2.5e-21 106.7 104 57.7
CiPaw.01G241400 Carya illinoinensis HOM05D002035 ORTHO05D002032 6.1e-20 102.1 234 32.5
Nn2g11853 Nelumbo nucifera HOM05D002035 ORTHO05D002032 4.0e-19 99.4 228 34.6
Prupe.3G075500 Prunus persica HOM05D002035 ORTHO05D002032 8.8e-19 98.2 177 37.3
Potri.001G176800 Populus trichocarpa HOM05D002035 ORTHO05D002032 2.0e-18 97.1 184 37.0
QL05p025724 Quercus lobata HOM05D002035 ORTHO05D002032 8.3e-17 91.7 178 34.8
Aqoxy7G01891 Aquilegia oxysepala HOM05D002035 ORTHO05D002032 1.4e-16 90.9 158 38.6
CSS0016789 Camellia sinensis var. sinensis HOM05D002035 ORTHO05D002032 1.4e-16 90.9 179 33.5
Gohir.D05G127600 Gossypium hirsutum HOM05D002035 ORTHO05D002032 1.2e-15 87.8 182 34.1
Lj7A639T57 Lonicera japonica HOM05D002035 ORTHO05D002032 1.2e-15 87.8 185 31.9
DCAR_011278 Daucus carota HOM05D002035 ORTHO05D002032 1.6e-15 87.4 183 31.7
Gorai.009G131700 Gossypium raimondii HOM05D002035 ORTHO05D002032 2.0e-15 87.0 182 34.1
Actinidia08824 Actinidia chinensis HOM05D002035 ORTHO05D002032 2.7e-15 86.7 227 31.3
Duzib192G0363 Durio zibethinus HOM05D002035 ORTHO05D002032 3.5e-15 86.3 139 40.3
Lj9A505T67 Lonicera japonica HOM05D002035 ORTHO05D002032 2.3e-14 83.6 216 30.6
Thecc.06G081100 Theobroma cacao HOM05D002035 ORTHO05D002032 2.3e-14 83.6 180 33.9
Atru.chr1.3215 Acer truncatum HOM05D002035 ORTHO05D002032 2.9e-14 83.2 221 29.9
Gohir.A05G126700 Gossypium hirsutum HOM05D002035 ORTHO05D002032 6.5e-14 82.0 151 33.8
Migut.I00835 Erythranthe guttata HOM05D002035 ORTHO05D002032 8.6e-14 81.6 185 32.4
Ciclev10026432m.g Citrus clementina HOM05D002035 ORTHO05D002032 1.9e-13 80.5 221 30.8
Potri.003G057700 Populus trichocarpa HOM05D002035 ORTHO05D002032 4.2e-13 79.3 184 31.5
Psat7g253600 Pisum sativum HOM05D002035 ORTHO05D002032 5.5e-13 79.0 227 28.6
Atru.chr1.3213 Acer truncatum HOM05D002035 ORTHO05D002032 7.2e-13 78.6 193 30.6
PSO063G6019 Papaver somniferum HOM05D002035 ORTHO05D002032 1.2e-12 77.8 225 31.1
COL.COLO4_30316 Corchorus olitorius HOM05D002035 ORTHO05D002032 1.6e-12 77.4 157 30.6
Dinv36594 Davidia involucrata HOM05D002035 ORTHO05D002032 6.1e-12 75.5 179 29.6
Peaxi162Scf00015g00535 Petunia axillaris HOM05D002035 ORTHO05D002032 6.1e-12 75.5 157 31.8
Solyc03g119900.4 Solanum lycopersicum HOM05D002035 ORTHO05D002032 1.0e-11 74.7 143 32.9
Sopen03g038780 Solanum pennellii HOM05D002035 ORTHO05D002032 1.0e-11 74.7 149 32.9
COL.COLO4_34949 Corchorus olitorius HOM05D002035 ORTHO05D002032 1.4e-11 74.3 140 33.6
Thecc.09G117000 Theobroma cacao HOM05D002035 ORTHO05D002032 2.3e-11 73.6 225 27.6
Manes.11G050600 Manihot esculenta HOM05D002035 ORTHO05D002032 3.0e-11 73.2 228 31.6
Glyma.08G208200 Glycine max HOM05D002035 ORTHO05D002032 4.0e-11 72.8 178 32.0
Phvul.010G152100 Phaseolus vulgaris HOM05D002035 ORTHO05D002032 4.0e-11 72.8 177 32.2
ATR0083G065 Amborella trichopoda HOM05D002035 ORTHO05D002032 1.2e-10 71.2 120 34.2
Solyc09g082570.3 Solanum lycopersicum HOM05D002035 ORTHO05D002032 1.5e-10 70.9 226 27.4
VMungo0331G0720 Vigna mungo HOM05D002035 ORTHO05D002032 1.5e-10 70.9 201 30.8
Hund12089 Selenicereus undatus HOM05D002035 ORTHO05D002032 2.0e-10 70.5 221 26.2
Aqoxy5G00414 Aquilegia oxysepala HOM05D002035 ORTHO05D002032 5.7e-10 68.9 226 27.4
MBI05_g12591_MAGBIO Magnolia biondii HOM05D002035 ORTHO05D002032 5.7e-10 68.9 224 25.9
PGSC0003DMG400006454 Solanum tuberosum HOM05D002035 ORTHO05D002032 5.7e-10 68.9 226 26.5
Manes.04G120300 Manihot esculenta HOM05D002035 ORTHO05D002032 7.5e-10 68.6 223 28.7
ClCG09G002410 Citrullus lanatus HOM05D002035 ORTHO05D002032 9.8e-10 68.2 196 28.6
Sopen09g031430 Solanum pennellii HOM05D002035 ORTHO05D002032 9.8e-10 68.2 204 27.0
CAN.G438.100 Capsicum annuum HOM05D002035 ORTHO05D002032 2.2e-09 67.0 153 30.7
Lj3g0011923 Lotus japonicus HOM05D002035 ORTHO05D002032 2.8e-09 66.6 180 28.9
PSO782G4178 Papaver somniferum HOM05D002035 ORTHO05D002032 6.3e-09 65.5 187 29.9
Nn1g02424 Nelumbo nucifera HOM05D002035 ORTHO05D002032 8.3e-09 65.1 228 24.1
Nitab4.5_0001046g0030 Nicotiana tabacum HOM05D002035 ORTHO05D002032 8.3e-09 65.1 189 27.5
Nitab4.5_0000085g0010 Nicotiana tabacum HOM05D002035 ORTHO05D002032 1.4e-08 64.3 189 27.5
CsaV3_2G004250 Cucumis sativus L. HOM05D002035 ORTHO05D002032 2.4e-08 63.5 179 27.9
THA.LOC104803053 Tarenaya hassleriana HOM05D002035 ORTHO05D002032 2.4e-08 63.5 236 26.3
Peaxi162Scf00282g00124 Petunia axillaris HOM05D002035 ORTHO05D002032 3.1e-08 63.2 208 25.5
PGSC0003DMG400019429 Solanum tuberosum HOM05D002035 ORTHO05D002032 4.1e-08 62.8 211 26.5
MD16G1198500 Malus domestica HOM05D002035 ORTHO05D002032 7.0e-08 62.0 159 31.4
Atru.chr1.3214 Acer truncatum HOM05D002035 ORTHO05D002032 9.2e-08 61.6 179 27.4
FAN02G0768 Fragaria x ananassa HOM05D002035 ORTHO05D002032 9.2e-08 61.6 147 28.6
Sopen01g041140 Solanum pennellii HOM05D002035 ORTHO05D002032 2.0e-07 60.5 211 27.5
Solyc01g097470.4 Solanum lycopersicum HOM05D002035 ORTHO05D002032 2.7e-07 60.1 211 27.5
TPR.G25193 Trifolium pratense HOM05D002035 ORTHO05D002032 3.5e-07 59.7 183 27.3
Actinidia05771 Actinidia chinensis HOM05D002035 ORTHO05D002032 4.5e-07 59.3 175 23.4
Eucgr.F02570 Eucalyptus grandis HOM05D002035 ORTHO05D002032 5.9e-07 58.9 179 28.5
Eucgr.H03419 Eucalyptus grandis HOM05D002035 ORTHO05D002032 5.9e-07 58.9 232 27.6
Gohir.A08G240401 Gossypium hirsutum HOM05D002035 ORTHO05D002032 5.9e-07 58.9 44 59.1
Lj5g0013179 Lotus japonicus HOM05D002035 ORTHO05D002032 7.8e-07 58.5 188 30.9
MD04G1222300 Malus domestica HOM05D002035 ORTHO05D002032 1.3e-06 57.8 148 27.0
VMungo0720G2123 Vigna mungo HOM05D002035 ORTHO05D002032 1.3e-06 57.8 221 25.3
Gohir.D02G040700 Gossypium hirsutum HOM05D002035 ORTHO05D002032 1.7e-06 57.4 191 27.7
Gorai.005G045100 Gossypium raimondii HOM05D002035 ORTHO05D002032 1.7e-06 57.4 191 27.7
TPR.G27503 Trifolium pratense HOM05D002035 ORTHO05D002032 1.7e-06 57.4 159 29.6
CAN.G1402.15 Capsicum annuum HOM05D002035 ORTHO05D002032 2.3e-06 57.0 189 27.0
FvH4_6g03170 Fragaria vesca HOM05D002035 ORTHO05D002032 5.0e-06 55.8 191 26.2
Gohir.A02G033803 Gossypium hirsutum HOM05D002035 ORTHO05D002032 5.0e-06 55.8 191 27.7
Gohir.A09G218600 Gossypium hirsutum HOM05D002035 ORTHO05D002032 5.0e-06 55.8 186 25.8
FAN05G0128 Fragaria x ananassa HOM05D002035 ORTHO05D002032 6.6e-06 55.5 148 27.0
FAN09G0076 Fragaria x ananassa HOM05D002035 ORTHO05D002032 6.6e-06 55.5 191 26.2
FAN14G3418 Fragaria x ananassa HOM05D002035 ORTHO05D002032 6.6e-06 55.5 191 26.2
Peaxi162Scf00316g01013 Petunia axillaris HOM05D002035 ORTHO05D002032 8.6e-06 55.1 183 26.8
Sp7g12860 Schrenkiella parvula HOM05D002035 ORTHO05D002032 8.6e-06 55.1 179 27.4


User provided reference genes

Program Settings