Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1679 Fragaria x ananassa HOM05D000104 ORTHO05D019205 6.5e-117 424.1 215 100.0
FvH4_6g01581 Fragaria vesca HOM05D000104 ORTHO05D006397 1.8e-79 299.7 166 92.2
FAN15G0988 Fragaria x ananassa HOM05D000104 ORTHO05D019205 2.4e-79 299.3 166 92.2
FAN14G4089 Fragaria x ananassa HOM05D000104 ORTHO05D006397 5.3e-79 298.1 166 91.6
FAN14G5045 Fragaria x ananassa HOM05D000104 ORTHO05D006397 5.3e-79 298.1 166 91.6
FAN09G4154 Fragaria x ananassa HOM05D000104 ORTHO05D006397 7.0e-79 297.7 166 91.6
FAN02G0967 Fragaria x ananassa HOM05D000104 ORTHO05D006397 1.1e-76 290.4 166 90.4
FAN05G1722 Fragaria x ananassa HOM05D000104 ORTHO05D006397 9.4e-76 287.3 166 89.8
FAN05G2560 Fragaria x ananassa HOM05D000104 ORTHO05D006397 9.4e-76 287.3 166 89.8
FAN03G1104 Fragaria x ananassa HOM05D004910 ORTHO05D019205 2.9e-61 239.2 140 88.6
RcHm_v2.0_Chr3g0449401 Rosa chinensis HOM05D000104 ORTHO05D006397 2.5e-52 209.5 161 69.6
Prupe.6G351600 Prunus persica HOM05D000104 ORTHO05D006397 1.1e-39 167.5 161 52.8
FAN28G2922 Fragaria x ananassa HOM05D000104 ORTHO05D019205 1.9e-36 156.8 95 86.3
MD00G1149200 Malus domestica HOM05D000104 ORTHO05D006397 6.4e-32 141.7 185 44.9
MD04G1232200 Malus domestica HOM05D000104 ORTHO05D006397 1.4e-31 140.6 174 46.6
Haze_04401 Corylus avellana HOM05D000104 ORTHO05D006397 3.6e-27 125.9 164 45.7
QL03p029602 Quercus lobata HOM05D000104 ORTHO05D006397 1.5e-25 120.6 163 42.9
Manes.09G147000 Manihot esculenta HOM05D000104 ORTHO05D006397 1.6e-22 110.5 150 41.3
CiPaw.08G118700 Carya illinoinensis HOM05D000104 ORTHO05D006397 2.7e-22 109.8 169 37.9
GSVIVG01023393001 Vitis vinifera HOM05D000104 ORTHO05D006397 3.0e-21 106.3 207 33.3
CANSAT54G2768 Cannabis sativa HOM05D000104 ORTHO05D006397 3.9e-21 105.9 174 37.9
Atru.chr2.1068 Acer truncatum HOM05D000104 ORTHO05D006397 8.7e-21 104.8 155 39.4
Sabra13G0044700 Salix brachista HOM05D000104 ORTHO05D006397 1.1e-20 104.4 169 36.1
Actinidia34760 Actinidia chinensis HOM05D000104 ORTHO05D006397 9.6e-20 101.3 177 37.9
Potri.013G048500 Populus trichocarpa HOM05D000104 ORTHO05D006397 1.6e-19 100.5 172 37.2
CSS0004215 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006397 2.8e-19 99.8 166 36.1
Potri.019G021500 Populus trichocarpa HOM05D000104 ORTHO05D006397 3.1e-18 96.3 167 38.3
Lj2C45G10 Lonicera japonica HOM05D000104 ORTHO05D006397 1.2e-17 94.4 173 35.3
Sabra19G0033000 Salix brachista HOM05D000104 ORTHO05D006397 2.9e-16 89.7 168 36.9
Thecc.05G267600 Theobroma cacao HOM05D000104 ORTHO05D006397 2.9e-16 89.7 170 37.6
Lalb_Chr06g0168221 Lupinus albus HOM05D000104 ORTHO05D006397 3.8e-16 89.4 157 37.6
TAR362G0360 Trochodendron aralioides HOM05D000104 ORTHO05D006397 4.9e-16 89.0 205 35.1
Eucgr.H04218 Eucalyptus grandis HOM05D000104 ORTHO05D006397 9.3e-15 84.7 207 34.3
PSO764G0152 Papaver somniferum HOM05D000104 ORTHO05D006397 2.1e-14 83.6 156 33.3
TWI60G0140 Tripterygium wilfordii HOM05D000104 ORTHO05D006397 2.7e-14 83.2 131 37.4
COL.COLO4_15520 Corchorus olitorius HOM05D000104 ORTHO05D006397 3.5e-14 82.8 180 32.2
Duzib128G0174 Durio zibethinus HOM05D000104 ORTHO05D006397 3.5e-14 82.8 169 36.1
Actinidia38931 Actinidia chinensis HOM05D000104 ORTHO05D006397 6.0e-14 82.0 158 36.7
Gohir.D11G255300 Gossypium hirsutum HOM05D000104 ORTHO05D006397 6.0e-14 82.0 162 37.0
Gorai.007G273900 Gossypium raimondii HOM05D000104 ORTHO05D006397 6.0e-14 82.0 162 37.0
Gohir.A11G245400 Gossypium hirsutum HOM05D000104 ORTHO05D006397 1.8e-13 80.5 161 34.8
VMungo0720G2029 Vigna mungo HOM05D000104 ORTHO05D006397 2.3e-13 80.1 194 29.4
vmacro10381 Vaccinium macrocarpon HOM05D000104 ORTHO05D006397 6.7e-13 78.6 187 28.9
arahy.Tifrunner.gnm1.ann1.21AGFE Arachis hypogaea HOM05D000104 ORTHO05D006397 8.7e-13 78.2 178 33.1
Ca_10025_v3 Cicer arietinum L. HOM05D000104 ORTHO05D006397 1.1e-12 77.8 155 32.9
Glyma.10G165000 Glycine max HOM05D000104 ORTHO05D006397 2.5e-12 76.6 130 35.4
arahy.Tifrunner.gnm1.ann1.N8MZL6 Arachis hypogaea HOM05D000104 ORTHO05D006397 7.4e-12 75.1 205 33.2
Rhsim09G0133300 Rhododendron simsii HOM05D000104 ORTHO05D006397 1.6e-11 73.9 183 29.0
Phvul.L001951 Phaseolus vulgaris HOM05D000104 ORTHO05D006397 3.6e-11 72.8 190 28.4
Glyma.20G227200 Glycine max HOM05D000104 ORTHO05D006397 4.8e-11 72.4 198 27.8
MELO3C008639.2 Cucumis melo HOM05D000104 ORTHO05D006397 6.2e-11 72.0 163 30.1
FAN16G3191 Fragaria x ananassa HOM05D000104 ORTHO05D019205 1.1e-10 71.2 38 89.5
Ciclev10030509m.g Citrus clementina HOM05D000104 ORTHO05D006397 3.1e-10 69.7 92 42.4
CsaV3_2G009970 Cucumis sativus L. HOM05D000104 ORTHO05D006397 3.1e-10 69.7 174 28.7
Sc09g0001860 Simmondsia chinensis HOM05D000104 ORTHO05D006397 9.0e-10 68.2 157 30.6
ClCG11G010390 Citrullus lanatus HOM05D000104 ORTHO05D006397 1.5e-09 67.4 222 27.0
Aqoxy5G00143 Aquilegia oxysepala HOM05D000104 ORTHO05D006397 5.8e-09 65.5 172 29.1
Nn1g02977 Nelumbo nucifera HOM05D000104 ORTHO05D006397 9.9e-09 64.7 156 30.8
Sed0024552 Sechium edule HOM05D000104 ORTHO05D006397 1.7e-08 63.9 122 35.2
Nitab4.5_0002088g0030 Nicotiana tabacum HOM05D000104 ORTHO05D006397 2.2e-08 63.5 129 34.1
SHI15632 Sapria himalayana HOM05D000104 ORTHO05D006397 1.1e-07 61.2 145 31.0
EL10Ac4g09754 Beta vulgaris HOM05D000104 ORTHO05D006397 1.9e-07 60.5 136 33.1
Nitab4.5_0000061g0050 Nicotiana tabacum HOM05D000104 ORTHO05D006397 1.9e-07 60.5 111 34.2
PGR004G1676 Punica granatum HOM05D000104 ORTHO05D006397 1.9e-07 60.5 129 32.6
Peaxi162Scf00373g01415 Petunia axillaris HOM05D000104 ORTHO05D006397 4.2e-07 59.3 112 35.7
Hund07179 Selenicereus undatus HOM05D000104 ORTHO05D006397 1.6e-06 57.4 117 35.9
SEGI_32416 Sequoiadendron giganteum HOM05D000104 ORTHO05D019205 1.6e-06 57.4 124 30.6


User provided reference genes

Program Settings