Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 2.7e-98 362.8 186 100.0
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 4.7e-95 352.1 186 96.2
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.8e-81 305.8 161 96.3
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 6.1e-79 298.5 161 95.7
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 1.4e-78 297.4 186 82.3
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 2.5e-48 196.8 190 56.3
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 4.9e-36 156.0 176 51.7
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 7.9e-34 148.7 183 47.5
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 6.4e-28 129.0 187 42.2
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 3.1e-22 110.2 201 40.3
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 6.9e-22 109.0 96 55.2
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 9.0e-22 108.6 166 37.3
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 1.5e-21 107.8 110 46.4
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 2.0e-21 107.5 115 53.9
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 2.6e-21 107.1 109 47.7
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 2.9e-20 103.6 184 38.6
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 6.5e-20 102.4 175 36.6
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 1.9e-19 100.9 95 51.6
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 1.9e-19 100.9 180 37.2
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 1.9e-19 100.9 185 35.7
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 1.6e-18 97.8 115 44.3
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 1.6e-18 97.8 109 43.1
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 2.1e-18 97.4 112 42.9
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 2.1e-18 97.4 110 43.6
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 7.9e-18 95.5 112 42.0
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 1.8e-17 94.4 103 44.7
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 3.0e-17 93.6 195 37.4
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 3.9e-17 93.2 177 31.1
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 3.3e-16 90.1 120 38.3
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 4.3e-16 89.7 183 33.9
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 7.4e-16 89.0 110 40.0
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 9.7e-16 88.6 115 40.0
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 2.2e-15 87.4 102 43.1
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 4.8e-15 86.3 104 43.3
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 6.3e-15 85.9 95 46.3
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 3.1e-14 83.6 100 46.0
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 5.3e-14 82.8 85 48.2
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 1.5e-13 81.3 101 40.6
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 3.4e-13 80.1 101 44.6
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 3.4e-13 80.1 97 45.4
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 4.5e-13 79.7 96 43.8
VMungo0720G0765 Vigna mungo HOM05D007752 ORTHO05D009994 3.2e-11 73.6 75 46.7
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 9.4e-11 72.0 74 47.3
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 1.2e-10 71.6 89 40.4
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 1.6e-10 71.2 109 36.7
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 1.6e-10 71.2 121 33.1
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 2.1e-10 70.9 89 40.4
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 2.7e-10 70.5 108 38.9
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 4.6e-10 69.7 103 38.8
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 4.6e-10 69.7 100 36.0
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 1.9e-08 64.3 179 27.9
HPP92_024978 Vanilla planifolia HOM05D007752 ORTHO05D009994 1.9e-08 64.3 127 32.3
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 2.5e-08 63.9 179 27.9
Manes.08G171200 Manihot esculenta HOM05D007752 ORTHO05D009994 7.4e-08 62.4 54 59.3
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 9.7e-08 62.0 62 45.2
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 1.3e-07 61.6 58 46.6
Sc20g0006960 Simmondsia chinensis HOM05D007752 ORTHO05D009994 1.3e-07 61.6 121 31.4
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 2.2e-07 60.8 74 41.9
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 3.7e-07 60.1 73 45.2
Eucgr.A00736 Eucalyptus grandis HOM05D007752 ORTHO05D009994 6.3e-07 59.3 56 48.2
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 6.3e-07 59.3 54 51.9
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 6.3e-07 59.3 76 40.8
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 6.3e-07 59.3 76 40.8
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 1.1e-06 58.5 163 30.7
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.4e-06 58.2 101 33.7
CDE06G1380 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 1.8e-06 57.8 98 29.6
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.8e-06 57.8 102 33.3
Os03g0336000 Oryza sativa ssp. japonica HOM05D007752 ORTHO05D009994 3.1e-06 57.0 88 28.4


User provided reference genes

Program Settings