Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1443 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.5e-102 373.6 182 100.0
FAN05G3646 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.3e-98 361.7 181 96.7
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 6.5e-94 347.4 181 93.4
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.5e-94 347.4 181 93.4
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 1.2e-68 263.5 177 74.6
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-63 246.9 196 67.3
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 6.6e-62 241.1 195 65.6
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 5.2e-43 178.3 178 53.9
FAN02G2985 Fragaria x ananassa HOM05D002060 ORTHO05D002098 2.1e-31 139.8 169 48.5
FAN10G0746 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.9e-30 135.6 167 46.7
FAN14G3911 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.9e-30 135.6 167 46.7
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-29 133.3 167 46.1
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.3e-29 132.1 167 46.1
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 1.3e-25 120.6 171 43.9
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 2.5e-21 106.3 160 41.2
FAN14G1402 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-19 99.4 99 53.5
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 9.0e-19 97.8 177 37.9
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-18 97.4 160 38.1
FvH4_6g47161 Fragaria vesca HOM05D006368 ORTHO05D035370 1.2e-18 97.4 158 40.5
FAN14G2825 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-18 96.3 64 68.8
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 3.4e-18 95.9 160 37.5
FAN05G5450 Fragaria x ananassa HOM05D006368 ORTHO05D035370 9.9e-18 94.4 56 75.0
FAN09G1584 Fragaria x ananassa HOM05D006368 ORTHO05D035370 9.9e-18 94.4 59 72.9
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.9e-17 92.8 160 35.6
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 2.9e-17 92.8 173 37.0
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.9e-17 92.0 204 31.9
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 5.4e-16 88.6 186 37.6
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.7e-15 86.3 146 38.4
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.5e-15 85.9 183 36.6
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 7.9e-15 84.7 190 36.3
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 1.3e-14 84.0 195 31.8
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-14 84.0 195 31.8
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 2.3e-14 83.2 173 32.9
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-14 83.2 173 32.9
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 2.3e-14 83.2 164 35.4
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 3.9e-14 82.4 179 34.1
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-12 77.4 170 31.8
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-12 77.0 165 34.5
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-12 77.0 165 34.5
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.1e-12 76.6 170 31.8
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 2.8e-12 76.3 169 36.1
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 2.8e-12 76.3 170 31.8
Prupe.1G004300 Prunus persica HOM05D006368 ORTHO05D006739 4.8e-12 75.5 58 55.2
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 1.1e-11 74.3 162 33.3
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-11 73.6 169 31.4
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 2.4e-11 73.2 181 33.1
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 5.3e-11 72.0 158 35.4
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.9e-11 71.6 162 32.7
FAN05G0916 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.0e-11 71.2 160 33.8
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 9.9e-10 67.8 163 33.1
Prupe.1G019300 Prunus persica HOM05D006368 ORTHO05D006739 9.9e-10 67.8 69 44.9
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.7e-09 67.0 160 33.8
FAN14G3548 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.9e-09 65.5 150 33.3
Lj1g0005351 Lotus japonicus HOM05D010147 ORTHO05D006739 8.4e-09 64.7 167 26.9
RcHm_v2.0_Chr3g0476221 Rosa chinensis HOM05D024214 ORTHO05D016562 1.1e-08 64.3 173 27.7
FAN09G4111 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-08 63.9 203 27.6
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-08 63.5 157 33.8
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 2.4e-08 63.2 170 32.4
FAN22G0881 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-08 63.2 170 33.5
FvH4_3g28140 Fragaria vesca HOM05D010931 ORTHO05D013603 4.2e-08 62.4 162 29.0
FAN11G4008 Fragaria x ananassa HOM05D010931 ORTHO05D013603 4.2e-08 62.4 162 29.0
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.5e-08 62.0 172 34.9
FAN09G3725 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.5e-08 62.0 172 34.9
Ca_07673_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 7.1e-08 61.6 174 28.2
Ca_07681_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 7.1e-08 61.6 154 27.9
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-07 60.8 167 30.5
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-07 60.8 175 27.4
FAN02G2364 Fragaria x ananassa HOM05D011252 ORTHO05D029353 2.7e-07 59.7 173 24.9
Ca_07680_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 4.6e-07 58.9 161 30.4
FvH4_6g16971 Fragaria vesca HOM05D011252 ORTHO05D029353 4.6e-07 58.9 173 24.3
FAN14G0447 Fragaria x ananassa HOM05D011252 ORTHO05D029353 4.6e-07 58.9 164 27.4
FvH4_2g13532 Fragaria vesca HOM05D006368 ORTHO05D006739 7.9e-07 58.2 59 49.2
FvH4_6g16960 Fragaria vesca HOM05D011252 ORTHO05D029353 7.9e-07 58.2 164 27.4
Prupe.1G016300 Prunus persica HOM05D006368 ORTHO05D006739 7.9e-07 58.2 147 32.0
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 1.0e-06 57.8 167 26.9
TPR.G38170 Trifolium pratense HOM05D010147 ORTHO05D006739 1.3e-06 57.4 160 26.9
Ca_07683_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 3.0e-06 56.2 161 27.3
FAN13G2642 Fragaria x ananassa HOM05D010931 ORTHO05D013603 8.7e-06 54.7 173 24.9


User provided reference genes

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