Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.4e-200 701.0 349 100.0
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.0e-193 677.9 349 96.8
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 1.7e-188 662.5 349 93.4
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 1.9e-187 659.1 338 97.0
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 5.8e-176 620.9 346 89.0
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.3e-172 609.8 345 86.7
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 6.9e-169 597.4 344 85.8
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 3.0e-156 555.4 328 81.4
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 2.0e-155 552.7 337 80.7
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 8.5e-151 537.3 330 79.4
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 7.2e-150 534.3 332 78.3
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 6.1e-149 531.2 317 81.7
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 1.0e-148 530.4 314 83.8
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 5.2e-148 528.1 329 78.1
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 5.7e-147 524.6 315 81.3
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 1.7e-146 523.1 318 80.8
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.8e-146 522.3 333 77.5
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 3.7e-146 521.9 328 76.8
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.1e-145 520.4 330 77.6
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.4e-145 520.0 322 77.6
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 1.8e-145 519.6 346 75.1
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 7.0e-145 517.7 318 80.2
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 2.0e-144 516.2 315 80.0
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 4.5e-144 515.0 311 79.7
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.0e-143 513.8 323 78.0
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.0e-143 513.8 312 80.1
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.7e-143 513.1 315 79.0
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 2.2e-143 512.7 311 79.7
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 2.9e-143 512.3 311 79.7
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 3.8e-143 511.9 311 79.7
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 5.0e-143 511.5 311 79.7
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 5.0e-143 511.5 322 75.8
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 6.5e-143 511.1 324 76.9
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 3.2e-142 508.8 335 74.0
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 9.4e-142 507.3 313 78.9
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.2e-141 506.9 312 79.2
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.2e-141 506.9 312 79.2
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.2e-141 506.9 311 78.8
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.6e-141 506.5 312 79.2
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 4.7e-141 505.0 313 79.9
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.4e-140 503.4 311 78.1
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.5e-139 500.0 312 77.2
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 4.4e-139 498.4 315 76.5
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 5.7e-139 498.0 338 71.3
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 5.7e-139 498.0 312 76.9
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 4.8e-138 495.0 320 76.2
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 6.3e-138 494.6 332 72.3
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 6.3e-138 494.6 314 75.8
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 3.1e-137 492.3 338 73.1
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 4.1e-137 491.9 315 74.9
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.2e-136 490.3 324 72.5
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 2.0e-136 489.6 315 76.2
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 7.7e-136 487.6 324 74.7
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 5.0e-135 485.0 314 74.5
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 8.5e-135 484.2 326 73.3
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 1.1e-134 483.8 325 69.8
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 7.2e-134 481.1 350 70.3
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 2.7e-133 479.2 316 70.9
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 6.1e-133 478.0 340 70.9
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.2e-131 473.8 339 68.4
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 9.8e-131 470.7 282 81.2
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.7e-130 469.9 323 71.8
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 8.3e-130 467.6 323 71.2
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 2.0e-128 463.0 314 71.0
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 7.7e-128 461.1 314 70.7
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.0e-127 460.7 326 69.9
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.3e-127 460.3 290 76.6
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.1e-126 457.2 314 70.7
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.9e-126 456.4 314 70.7
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 2.5e-126 456.1 311 70.1
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 5.5e-126 454.9 314 70.1
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 5.2e-124 448.4 279 78.5
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 8.8e-124 447.6 329 67.8
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 1.5e-123 446.8 322 65.2
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 9.8e-123 444.1 340 64.4
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 4.1e-121 438.7 292 72.3
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 5.4e-121 438.3 283 77.4
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 4.5e-120 435.3 314 67.5
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 1.7e-119 433.3 313 65.8
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 5.0e-119 431.8 314 66.6
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 8.6e-119 431.0 326 65.0
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 7.3e-118 427.9 320 64.4
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 1.2e-117 427.2 310 65.8
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 1.4e-108 397.1 251 77.7
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 5.2e-108 395.2 240 77.9
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 5.8e-107 391.7 239 81.6
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 9.8e-107 391.0 319 63.9
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.3e-106 390.6 315 62.2
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 3.0e-103 379.4 318 56.0
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 3.3e-102 375.9 320 61.6
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 4.9e-98 362.1 286 59.8
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 6.8e-92 341.7 319 55.8
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 8.9e-92 341.3 327 51.4
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 5.8e-91 338.6 308 52.9
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.4e-89 334.0 310 51.3
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.4e-89 334.0 310 51.3
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 3.3e-86 322.8 261 59.8
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.3e-86 321.6 308 50.3
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.6e-85 320.5 308 49.0
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.9e-84 315.1 317 48.3
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 8.4e-82 308.1 308 48.4
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.1e-81 307.8 307 48.2
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 1.4e-81 307.4 233 65.2
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.9e-81 307.0 308 48.1
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 5.6e-78 295.4 325 48.6
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 2.4e-73 280.0 314 45.5
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 3.2e-73 279.6 308 50.6
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 3.7e-69 266.2 290 52.4
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.2e-59 234.6 213 54.5
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.5e-51 206.1 132 81.8
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 1.5e-30 137.9 114 57.9
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 6.8e-07 59.3 39 66.7


User provided reference genes

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