Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1313 Fragaria x ananassa HOM05D000874 ORTHO05D201490 1.8e-307 1058.5 570 100.0
FvH4_6g18040 Fragaria vesca HOM05D000874 ORTHO05D001049 1.2e-162 577.4 413 78.7
FAN14G2556 Fragaria x ananassa HOM05D000874 ORTHO05D001049 4.4e-112 409.5 399 65.9
RcHm_v2.0_Chr3g0472301 Rosa chinensis HOM05D000874 ORTHO05D001049 1.7e-92 344.4 411 55.7
Prupe.4G208000 Prunus persica HOM05D005148 ORTHO05D006218 1.2e-29 135.6 306 41.8
RcHm_v2.0_Chr5g0037921 Rosa chinensis HOM05D005148 ORTHO05D006218 7.9e-29 132.9 369 37.4
FAN11G3177 Fragaria x ananassa HOM05D005148 ORTHO05D006218 2.9e-23 114.4 333 36.6
FAN21G2996 Fragaria x ananassa HOM05D005148 ORTHO05D006218 1.4e-22 112.1 384 34.6
RcHm_v2.0_Chr4g0405041 Rosa chinensis HOM05D005148 ORTHO05D006218 2.5e-22 111.3 364 33.5
FAN16G3277 Fragaria x ananassa HOM05D005148 ORTHO05D006218 6.0e-21 106.7 190 44.2
FvH4_3g22101 Fragaria vesca HOM05D005148 ORTHO05D006218 6.7e-20 103.2 384 33.3
MD03G1208700 Malus domestica HOM05D005148 ORTHO05D006218 5.9e-16 90.1 300 35.7
MD11G1223400 Malus domestica HOM05D005148 ORTHO05D006218 1.1e-11 75.9 146 39.7
Ciclev10008061m.g Citrus clementina HOM05D005148 ORTHO05D006218 1.5e-08 65.5 85 55.3
FAN05G2740 Fragaria x ananassa HOM05D052390 ORTHO05D202610 2.0e-08 65.1 43 72.1
FAN05G5027 Fragaria x ananassa HOM05D052390 ORTHO05D201707 2.0e-08 65.1 43 72.1
Duzib268G1307 Durio zibethinus HOM05D005148 ORTHO05D006218 1.4e-06 58.9 148 40.5
PGR042G3618 Punica granatum HOM05D005148 ORTHO05D006218 7.2e-06 56.6 67 53.7


User provided reference genes

Program Settings