Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1311 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.7e-82 308.1 156 100.0
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 4.9e-74 281.2 155 92.3
FvH4_6g48151 Fragaria vesca HOM05D000576 ORTHO05D000368 2.7e-56 222.2 131 87.8
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.5e-54 216.5 161 70.8
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 3.0e-47 192.2 159 64.8
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 8.7e-47 190.7 160 63.1
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 4.8e-45 184.9 160 61.9
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.3e-42 176.8 159 62.3
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.0e-39 165.6 167 57.5
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 1.3e-34 150.2 159 51.6
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.4e-33 146.7 160 55.0
FvH4_6g48330 Fragaria vesca HOM05D008847 ORTHO05D000368 1.5e-30 136.7 130 58.5
FAN09G3072 Fragaria x ananassa HOM05D001529 ORTHO05D000368 9.7e-30 134.0 186 48.4
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 2.2e-29 132.9 159 50.3
RcHm_v2.0_Chr5g0047501 Rosa chinensis HOM05D008847 ORTHO05D000368 1.1e-25 120.6 133 50.4
FvH4_6g48431 Fragaria vesca HOM05D008847 ORTHO05D000368 7.9e-24 114.4 115 53.0
FAN14G4345 Fragaria x ananassa HOM05D008847 ORTHO05D000368 7.9e-24 114.4 115 53.0
FAN02G4373 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.7e-21 105.5 80 68.8
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 8.2e-21 104.4 173 42.2
FAN05G3417 Fragaria x ananassa HOM05D008847 ORTHO05D000368 5.3e-20 101.7 126 47.6
FAN14G0812 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.5e-19 100.1 141 46.1
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 1.5e-19 100.1 161 41.6
FvH4_6g48180 Fragaria vesca HOM05D000576 ORTHO05D000368 3.2e-17 92.4 61 73.8
FAN03G0578 Fragaria x ananassa HOM05D008847 ORTHO05D000368 4.2e-17 92.0 171 36.8
FAN05G4147 Fragaria x ananassa HOM05D008847 ORTHO05D000368 9.4e-17 90.9 109 51.4
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.0e-16 87.8 165 35.8
Prupe.3G259800 Prunus persica HOM05D000576 ORTHO05D000368 1.0e-15 87.4 138 38.4
FAN15G1135 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.4e-15 87.0 75 57.3
FvH4_7g27481 Fragaria vesca HOM05D008847 ORTHO05D000368 1.8e-15 86.7 173 37.0
FAN05G2544 Fragaria x ananassa HOM05D008847 ORTHO05D016304 2.3e-15 86.3 147 36.1
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.9e-15 85.5 171 35.7
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.7e-15 84.7 171 35.1
FAN01G2751 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.6e-14 82.8 170 38.2
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.7e-14 80.9 175 35.4
RcHm_v2.0_Chr5g0008761 Rosa chinensis HOM05D008847 ORTHO05D045484 4.8e-13 78.6 138 40.6
Potri.017G092301 Populus trichocarpa HOM05D008175 ORTHO05D000368 6.3e-13 78.2 136 36.8
FvH4_7g25361 Fragaria vesca HOM05D008847 ORTHO05D000368 1.1e-12 77.4 134 40.3
Potri.016G106600 Populus trichocarpa HOM05D016710 ORTHO05D015329 1.8e-12 76.6 162 33.3
FAN06G2118 Fragaria x ananassa HOM05D008847 ORTHO05D016304 2.4e-12 76.3 132 39.4
FAN06G1177 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.1e-12 75.5 132 40.9
FAN01G0010 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.2e-11 73.9 174 35.1
FAN03G0347 Fragaria x ananassa HOM05D008847 ORTHO05D000368 5.9e-11 71.6 130 38.5
FAN06G2140 Fragaria x ananassa HOM05D008847 ORTHO05D000368 5.9e-11 71.6 130 38.5
FAN06G3184 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.2e-10 69.7 130 38.5
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 2.2e-10 69.7 136 33.8
Prupe.3G259300 Prunus persica HOM05D008847 ORTHO05D000368 5.0e-10 68.6 166 34.3
FvH4_6g44020 Fragaria vesca HOM05D008847 ORTHO05D000368 8.5e-10 67.8 163 33.1
FAN10G0027 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.9e-09 66.6 88 42.0
RcHm_v2.0_Chr2g0167681 Rosa chinensis HOM05D008847 ORTHO05D000368 1.9e-09 66.6 68 57.4
CSS0035647 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.5e-09 66.2 164 34.1
FAN03G1143 Fragaria x ananassa HOM05D008847 ORTHO05D000368 7.2e-09 64.7 124 38.7
FAN23G0158 Fragaria x ananassa HOM05D029661 ORTHO05D029371 1.2e-08 63.9 127 32.3
FAN09G2824 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.1e-08 63.2 102 43.1
Psat3g004120 Pisum sativum HOM05D009500 ORTHO05D000368 2.7e-08 62.8 123 34.1
Medtr7g114090 Medicago truncatula HOM05D009500 ORTHO05D000368 3.6e-08 62.4 140 33.6
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 3.6e-08 62.4 127 33.9
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 3.6e-08 62.4 166 29.5
Rhsim02G0051900 Rhododendron simsii HOM05D000576 ORTHO05D015329 4.7e-08 62.0 164 29.9
TPR.G9274 Trifolium pratense HOM05D009500 ORTHO05D000368 1.0e-07 60.8 82 40.2
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 1.8e-07 60.1 160 30.6
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 3.0e-07 59.3 164 31.7
TPR.G4714 Trifolium pratense HOM05D009500 ORTHO05D000368 3.0e-07 59.3 81 37.0
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 4.0e-07 58.9 128 32.0
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 4.0e-07 58.9 136 32.4
Phvul.003G068100 Phaseolus vulgaris HOM05D000576 ORTHO05D000368 5.2e-07 58.5 141 34.0
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 5.2e-07 58.5 163 30.1
Glyma.08G297700 Glycine max HOM05D000576 ORTHO05D000368 6.7e-07 58.2 128 34.4
VMungo0251G0440 Vigna mungo HOM05D000576 ORTHO05D000368 6.7e-07 58.2 150 31.3
DCAR_023416 Daucus carota HOM05D000576 ORTHO05D000368 8.8e-07 57.8 168 30.4
DCAR_026937 Daucus carota HOM05D000576 ORTHO05D000368 8.8e-07 57.8 167 28.7
FAN24G2401 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.8e-07 57.8 86 40.7
QL11p001174 Quercus lobata HOM05D000576 ORTHO05D000368 8.8e-07 57.8 162 32.1
TPR.G4800 Trifolium pratense HOM05D009500 ORTHO05D000368 8.8e-07 57.8 90 35.6
Ca_09502_v3 Cicer arietinum L. HOM05D009500 ORTHO05D000368 1.2e-06 57.4 124 31.5
Actinidia31191 Actinidia chinensis HOM05D000576 ORTHO05D000368 2.0e-06 56.6 144 34.0
Migut.A00500 Erythranthe guttata HOM05D000312 ORTHO05D000221 2.0e-06 56.6 182 31.3
Medtr7g116580 Medicago truncatula HOM05D009500 ORTHO05D000368 2.0e-06 56.6 129 31.8
TPR.G11377 Trifolium pratense HOM05D009500 ORTHO05D000368 2.0e-06 56.6 123 32.5
Medtr7g116260 Medicago truncatula HOM05D009500 ORTHO05D000368 2.6e-06 56.2 80 37.5
Potri.016G106650 Populus trichocarpa HOM05D016710 ORTHO05D015329 4.4e-06 55.5 112 33.9
Rhsim05G0090700 Rhododendron simsii HOM05D000576 ORTHO05D015329 4.4e-06 55.5 162 28.4
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 4.4e-06 55.5 166 29.5
FAN02G4075 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.7e-06 55.1 34 76.5
Ciclev10008427m.g Citrus clementina HOM05D000576 ORTHO05D000368 7.5e-06 54.7 130 33.8
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 7.5e-06 54.7 102 33.3
DCAR_026935 Daucus carota HOM05D000576 ORTHO05D000368 9.7e-06 54.3 167 28.1
DCAR_026938 Daucus carota HOM05D000576 ORTHO05D000368 9.7e-06 54.3 122 31.1
DCAR_026939 Daucus carota HOM05D000576 ORTHO05D000368 9.7e-06 54.3 122 32.0
Dinv16567 Davidia involucrata HOM05D000312 ORTHO05D000221 9.7e-06 54.3 123 35.0
Dinv22828 Davidia involucrata HOM05D000576 ORTHO05D000368 9.7e-06 54.3 119 31.1
Migut.C01273 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.7e-06 54.3 99 34.3
Oeu040176.1 Olea europaea HOM05D000312 ORTHO05D000221 9.7e-06 54.3 183 31.1


User provided reference genes

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