Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1293 Fragaria x ananassa HOM05D002982 ORTHO05D003345 1.3e-137 493.0 256 100.0
FvH4_6g54040 Fragaria vesca HOM05D002982 ORTHO05D003345 2.3e-65 253.1 158 87.3
FAN14G1398 Fragaria x ananassa HOM05D002982 ORTHO05D003345 2.3e-65 253.1 158 87.3
FAN02G0330 Fragaria x ananassa HOM05D002982 ORTHO05D003345 4.0e-65 252.3 152 88.2
FAN09G1637 Fragaria x ananassa HOM05D002982 ORTHO05D003345 2.2e-63 246.5 158 86.1
RcHm_v2.0_Chr2g0176221 Rosa chinensis HOM05D002982 ORTHO05D003345 7.3e-51 204.9 154 74.7
Prupe.3G311000 Prunus persica HOM05D002982 ORTHO05D003345 2.7e-37 159.8 167 56.9
MD09G1006000 Malus domestica HOM05D002982 ORTHO05D003345 1.1e-33 147.9 168 53.6
MD17G1010000 Malus domestica HOM05D002982 ORTHO05D003345 7.6e-32 141.7 171 52.6
CANSAT64G1652 Cannabis sativa HOM05D002982 ORTHO05D003345 5.1e-28 129.0 162 48.8
Duzib147G0161 Durio zibethinus HOM05D002982 ORTHO05D003345 4.3e-27 125.9 169 48.5
Thecc.04G043100 Theobroma cacao HOM05D002982 ORTHO05D003345 1.3e-26 124.4 168 48.2
COL.COLO4_13321 Corchorus olitorius HOM05D002982 ORTHO05D003345 1.6e-26 124.0 169 46.2
Duzib264G1039 Durio zibethinus HOM05D002982 ORTHO05D003345 6.2e-26 122.1 164 48.8
CSS0048135 Camellia sinensis var. sinensis HOM05D002982 ORTHO05D003345 5.8e-24 115.5 169 45.6
Dinv33300 Davidia involucrata HOM05D002982 ORTHO05D003345 5.8e-24 115.5 161 47.8
QL02p070408 Quercus lobata HOM05D002982 ORTHO05D003345 3.8e-23 112.8 168 45.2
Atru.chr6.2624 Acer truncatum HOM05D002982 ORTHO05D003345 4.9e-23 112.5 170 42.4
CSS0004292 Camellia sinensis var. sinensis HOM05D002982 ORTHO05D003345 4.9e-23 112.5 170 45.9
CSS0022268 Camellia sinensis var. sinensis HOM05D002982 ORTHO05D003345 4.9e-23 112.5 170 43.5
CSS0033531 Camellia sinensis var. sinensis HOM05D002982 ORTHO05D003345 4.9e-23 112.5 170 43.5
Gohir.D04G073900 Gossypium hirsutum HOM05D002982 ORTHO05D003345 6.5e-23 112.1 168 42.9
Gorai.012G083300 Gossypium raimondii HOM05D002982 ORTHO05D003345 6.5e-23 112.1 168 42.9
Cfa007187 Carpinus fangiana HOM05D002982 ORTHO05D003345 1.1e-22 111.3 167 45.5
Haze_14921 Corylus avellana HOM05D002982 ORTHO05D003345 3.2e-22 109.8 171 45.0
Gohir.A05G335100 Gossypium hirsutum HOM05D002982 ORTHO05D003345 3.2e-22 109.8 168 41.7
TAR622G1079 Trochodendron aralioides HOM05D002982 ORTHO05D003345 1.8e-20 104.0 161 44.1
Actinidia36236 Actinidia chinensis HOM05D002982 ORTHO05D003345 6.7e-20 102.1 167 41.9
Ciclev10014350m.g Citrus clementina HOM05D002982 ORTHO05D003345 1.1e-19 101.3 173 40.5
Oeu020406.4 Olea europaea HOM05D002982 ORTHO05D003345 1.9e-19 100.5 158 41.8
vmacro05986 Vaccinium macrocarpon HOM05D002982 ORTHO05D003345 1.9e-19 100.5 168 41.7
CiPaw.03G004000 Carya illinoinensis HOM05D002982 ORTHO05D003345 2.2e-18 97.1 164 42.1
CiPaw.04G002700 Carya illinoinensis HOM05D002982 ORTHO05D003345 2.8e-18 96.7 178 38.8
Gohir.A07G231200 Gossypium hirsutum HOM05D002982 ORTHO05D003345 3.7e-18 96.3 166 40.4
Manes.04G090400 Manihot esculenta HOM05D002982 ORTHO05D003345 4.8e-18 95.9 208 33.7
Manes.11G079500 Manihot esculenta HOM05D002982 ORTHO05D003345 8.2e-18 95.1 171 39.8
Rhsim10G0002900 Rhododendron simsii HOM05D002982 ORTHO05D003345 1.1e-17 94.7 168 40.5
Cpa.g.sc70.99 Carica papaya HOM05D002982 ORTHO05D003345 1.8e-17 94.0 166 41.0
GSVIVG01033027001 Vitis vinifera HOM05D002982 ORTHO05D003345 1.8e-17 94.0 165 41.8
TWI34G0377 Tripterygium wilfordii HOM05D002982 ORTHO05D003345 3.1e-17 93.2 171 41.5
TWI60G0718 Tripterygium wilfordii HOM05D002982 ORTHO05D003345 2.2e-15 87.0 172 39.0
Potri.001G324700 Populus trichocarpa HOM05D002982 ORTHO05D003345 1.9e-14 84.0 166 38.6
Dinv23195 Davidia involucrata HOM05D002982 ORTHO05D003345 6.1e-13 79.0 148 39.9
Lj7A614T39 Lonicera japonica HOM05D002982 ORTHO05D003345 7.9e-13 78.6 168 38.7
Cc07_g01120 Coffea canephora HOM05D002982 ORTHO05D003345 1.0e-12 78.2 170 37.6
Sabra16G0207200 Salix brachista HOM05D002982 ORTHO05D003345 1.0e-12 78.2 165 37.0
Nn1g09960 Nelumbo nucifera HOM05D002982 ORTHO05D003345 2.3e-12 77.0 172 36.6
Nn4g22202 Nelumbo nucifera HOM05D002982 ORTHO05D003345 2.3e-12 77.0 172 36.6
TAR374G0366 Trochodendron aralioides HOM05D002982 ORTHO05D003345 2.3e-12 77.0 171 36.8
Ciclev10030778m.g Citrus clementina HOM05D002982 ORTHO05D003345 2.5e-11 73.6 174 35.6
FvH4_3g02970 Fragaria vesca HOM05D002982 ORTHO05D003345 2.5e-11 73.6 41 82.9
MD14G1150300 Malus domestica HOM05D002982 ORTHO05D003345 4.3e-11 72.8 162 35.2
MELO3C014939.2 Cucumis melo HOM05D002982 ORTHO05D003345 7.4e-11 72.0 162 34.6
GSVIVG01008617001 Vitis vinifera HOM05D002982 ORTHO05D003345 1.3e-10 71.2 165 35.2
CsaV3_3G026450 Cucumis sativus L. HOM05D002982 ORTHO05D003345 1.7e-10 70.9 162 34.6
Nn3g16339 Nelumbo nucifera HOM05D002982 ORTHO05D003345 1.7e-10 70.9 169 35.5
Aqoxy5G03221 Aquilegia oxysepala HOM05D002982 ORTHO05D003345 2.2e-10 70.5 163 34.4
ClCG05G013950 Citrullus lanatus HOM05D002982 ORTHO05D003345 2.2e-10 70.5 163 35.0
Prupe.5G145000 Prunus persica HOM05D002982 ORTHO05D003345 2.2e-10 70.5 166 33.7
FAN08G2795 Fragaria x ananassa HOM05D002982 ORTHO05D003345 3.7e-10 69.7 159 34.0
RcHm_v2.0_Chr7g0189131 Rosa chinensis HOM05D002982 ORTHO05D003345 8.2e-10 68.6 169 34.9
FAN13G0170 Fragaria x ananassa HOM05D002982 ORTHO05D003345 1.8e-09 67.4 159 33.3
FAN18G2382 Fragaria x ananassa HOM05D002982 ORTHO05D003345 2.4e-09 67.0 159 33.3
PGR083G2252 Punica granatum HOM05D002982 ORTHO05D003345 2.4e-09 67.0 148 35.8
FvH4_5g09080 Fragaria vesca HOM05D002982 ORTHO05D003345 4.1e-09 66.2 159 33.3
FAN25G2251 Fragaria x ananassa HOM05D002982 ORTHO05D003345 4.1e-09 66.2 58 62.1
Glyma.16G051500 Glycine max HOM05D002982 ORTHO05D003345 6.9e-09 65.5 171 33.3
Haze_07124 Corylus avellana HOM05D002982 ORTHO05D003345 9.1e-09 65.1 173 34.1
Glyma.19G097300 Glycine max HOM05D002982 ORTHO05D003345 9.1e-09 65.1 169 30.8
Gohir.D07G238450 Gossypium hirsutum HOM05D002982 ORTHO05D003345 9.1e-09 65.1 134 35.8
ECA232G4301 Erigeron canadensis HOM05D002982 ORTHO05D003345 1.2e-08 64.7 147 36.1
AUR62029533 Chenopodium quinoa HOM05D002982 ORTHO05D003345 1.5e-08 64.3 168 30.4
HanXRQChr09g0273621 Helianthus annuus HOM05D002982 ORTHO05D003345 3.4e-08 63.2 143 34.3
Sed0004289 Sechium edule HOM05D002982 ORTHO05D003345 4.5e-08 62.8 162 31.5
Sed0017891 Sechium edule HOM05D002982 ORTHO05D003345 5.9e-08 62.4 155 34.2
AUR62034791 Chenopodium quinoa HOM05D002982 ORTHO05D003345 1.0e-07 61.6 168 29.2
PSO017G5996 Papaver somniferum HOM05D002982 ORTHO05D003345 1.3e-07 61.2 178 29.8
COL.COLO4_16681 Corchorus olitorius HOM05D002982 ORTHO05D003345 1.7e-07 60.8 160 31.9
CSS0022023 Camellia sinensis var. sinensis HOM05D002982 ORTHO05D003345 2.9e-07 60.1 159 33.3
Thecc.03G137100 Theobroma cacao HOM05D002982 ORTHO05D003345 2.9e-07 60.1 165 33.3
VMungo1383G3008 Vigna mungo HOM05D002076 ORTHO05D002087 2.9e-07 60.1 157 34.4
CAN.G637.62 Capsicum annuum HOM05D002982 ORTHO05D003345 3.8e-07 59.7 161 33.5
QL10p001113 Quercus lobata HOM05D002982 ORTHO05D003345 5.0e-07 59.3 159 34.0
PSO478G0665 Papaver somniferum HOM05D002982 ORTHO05D003345 6.5e-07 58.9 178 29.2
Actinidia18322 Actinidia chinensis HOM05D002982 ORTHO05D003345 8.5e-07 58.5 165 33.3
C07p35960 Brassica napus HOM05D002982 ORTHO05D003345 8.5e-07 58.5 150 37.3
BolC7t44113H Brassica oleracea HOM05D002982 ORTHO05D003345 8.5e-07 58.5 150 37.3
Oeu058112.1 Olea europaea HOM05D002982 ORTHO05D003345 8.5e-07 58.5 157 31.2
Potri.015G103500 Populus trichocarpa HOM05D002982 ORTHO05D003345 1.1e-06 58.2 147 32.7
Peaxi162Scf00171g01126 Petunia axillaris HOM05D002982 ORTHO05D003345 1.4e-06 57.8 159 32.1
Migut.F00028 Erythranthe guttata HOM05D002982 ORTHO05D003345 2.5e-06 57.0 164 34.1
Gohir.D03G112000 Gossypium hirsutum HOM05D002982 ORTHO05D003345 2.5e-06 57.0 160 33.1
Hma1.2p1_0168F.1_g074180 Hydrangea macrophylla HOM05D002982 ORTHO05D003345 2.5e-06 57.0 150 38.0
Lsat_1_v5_gn_4_83620 Lactuca sativa HOM05D002982 ORTHO05D003345 2.5e-06 57.0 157 32.5
Phvul.001G088000 Phaseolus vulgaris HOM05D002982 ORTHO05D003345 2.5e-06 57.0 172 32.6
Sopen03g028460 Solanum pennellii HOM05D002982 ORTHO05D003345 2.5e-06 57.0 165 31.5
Lj1g0002944 Lotus japonicus HOM05D002982 ORTHO05D003345 3.2e-06 56.6 157 32.5
Gohir.A03G054900 Gossypium hirsutum HOM05D002982 ORTHO05D003345 4.2e-06 56.2 160 33.1
Gorai.003G118300 Gossypium raimondii HOM05D002982 ORTHO05D003345 4.2e-06 56.2 160 33.1
PGSC0003DMG400012026 Solanum tuberosum HOM05D002982 ORTHO05D003345 5.5e-06 55.8 165 31.5
Potri.012G104200 Populus trichocarpa HOM05D002982 ORTHO05D003345 9.4e-06 55.1 148 33.1
Solyc03g097710.4 Solanum lycopersicum HOM05D002982 ORTHO05D003345 9.4e-06 55.1 165 30.9


User provided reference genes

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