Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1237 Fragaria x ananassa HOM05D005844 ORTHO05D007203 5.0e-154 547.7 278 100.0
FAN05G4937 Fragaria x ananassa HOM05D005844 ORTHO05D007203 8.8e-151 537.0 278 95.3
FAN09G1449 Fragaria x ananassa HOM05D005844 ORTHO05D007203 8.8e-151 537.0 278 97.5
FvH4_6g51630 Fragaria vesca HOM05D005844 ORTHO05D007203 3.7e-149 531.6 278 97.1
FAN14G2428 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.3e-146 523.1 278 93.9
RcHm_v2.0_Chr2g0173161 Rosa chinensis HOM05D005844 ORTHO05D007203 2.2e-133 479.2 262 90.5
MD17G1023500 Malus domestica HOM05D005844 ORTHO05D007203 2.1e-120 436.0 292 78.1
Prupe.3G293000 Prunus persica HOM05D005844 ORTHO05D007203 1.0e-114 417.2 239 86.2
Ciclev10016139m.g Citrus clementina HOM05D005844 ORTHO05D007203 9.2e-108 394.0 259 73.0
Cfa007347 Carpinus fangiana HOM05D005844 ORTHO05D007203 6.0e-107 391.3 240 77.9
Actinidia36121 Actinidia chinensis HOM05D005844 ORTHO05D007203 5.1e-106 388.3 230 77.0
Aqoxy5G03753 Aquilegia oxysepala HOM05D005844 ORTHO05D007203 6.6e-106 387.9 282 68.8
CiPaw.03G045000 Carya illinoinensis HOM05D005844 ORTHO05D007203 1.9e-105 386.3 276 70.7
Dinv33434 Davidia involucrata HOM05D005844 ORTHO05D007203 1.9e-105 386.3 250 73.6
Actinidia05987 Actinidia chinensis HOM05D005844 ORTHO05D007203 5.6e-105 384.8 272 69.1
Duzib187G1685 Durio zibethinus HOM05D005844 ORTHO05D007203 7.3e-105 384.4 228 77.2
Dinv09631 Davidia involucrata HOM05D005844 ORTHO05D007203 1.2e-104 383.6 250 72.8
Potri.001G344000 Populus trichocarpa HOM05D005844 ORTHO05D007203 1.6e-104 383.3 257 71.2
THA.LOC104823955 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 4.0e-103 378.6 285 65.6
vmacro05871 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 5.3e-103 378.3 265 70.2
Nn4g22606 Nelumbo nucifera HOM05D005844 ORTHO05D007203 1.2e-102 377.1 241 73.9
Sc16g0003190 Simmondsia chinensis HOM05D005844 ORTHO05D007203 2.6e-102 375.9 221 78.3
CSS0012729 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 5.8e-102 374.8 254 68.9
Gohir.D04G058000 Gossypium hirsutum HOM05D005844 ORTHO05D007203 1.7e-101 373.2 278 65.8
QL02p074142 Quercus lobata HOM05D005844 ORTHO05D007203 1.7e-101 373.2 279 65.2
Gohir.A05G355200 Gossypium hirsutum HOM05D005844 ORTHO05D007203 2.9e-101 372.5 275 67.3
CsaV3_5G027090 Cucumis sativus L. HOM05D005844 ORTHO05D007203 4.9e-101 371.7 280 66.4
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 4.9e-101 371.7 287 65.2
SalBow7G1242 Salvia bowleyana HOM05D005844 ORTHO05D007203 8.4e-101 370.9 229 75.1
Gorai.012G064700 Gossypium raimondii HOM05D005844 ORTHO05D007203 1.1e-100 370.5 280 65.7
Rhsim10G0015300 Rhododendron simsii HOM05D005844 ORTHO05D007203 1.4e-100 370.2 266 68.8
Rhsim10G0016000 Rhododendron simsii HOM05D005844 ORTHO05D007203 1.4e-100 370.2 266 68.8
Cpa.g.c26638.3 Carica papaya HOM05D005844 ORTHO05D007203 1.9e-100 369.8 284 67.3
ClCG09G019300 Citrullus lanatus HOM05D005844 ORTHO05D007203 3.2e-100 369.0 278 65.8
THA.LOC104805364 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 4.2e-100 368.6 291 63.9
Thecc.04G018700 Theobroma cacao HOM05D005844 ORTHO05D007203 4.2e-100 368.6 287 64.1
CANSAT64G0956 Cannabis sativa HOM05D005844 ORTHO05D007203 5.4e-100 368.2 287 68.6
HanXRQChr02g0043121 Helianthus annuus HOM05D005844 ORTHO05D007203 7.1e-100 367.9 246 72.4
TWI36G0829 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 9.3e-100 367.5 231 72.7
COL.COLO4_29165 Corchorus olitorius HOM05D005844 ORTHO05D007203 1.6e-99 366.7 221 76.0
MSTRG.3288 Avicennia marina HOM05D005844 ORTHO05D007203 2.1e-99 366.3 277 67.9
GSVIVG01032391001 Vitis vinifera HOM05D005844 ORTHO05D007203 2.1e-99 366.3 221 76.0
Solyc02g093390.4 Solanum lycopersicum HOM05D005844 ORTHO05D007203 2.7e-99 365.9 240 72.1
TWI56G0011 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 6.0e-99 364.8 274 66.4
SGA_v2.0_scaffold18G08274 Striga asiatica HOM05D005844 ORTHO05D007203 1.0e-98 364.0 229 75.1
PGR142G0612 Punica granatum HOM05D005844 ORTHO05D007203 1.3e-98 363.6 260 69.2
Sabra16G0223300 Salix brachista HOM05D005844 ORTHO05D007203 1.3e-98 363.6 271 66.8
Sp7g01340 Schrenkiella parvula HOM05D005844 ORTHO05D007203 2.3e-98 362.8 282 65.6
BcaB02g07945 Brassica carinata HOM05D005844 ORTHO05D007203 3.9e-98 362.1 274 65.0
Manes.15G150500 Manihot esculenta HOM05D005844 ORTHO05D007203 3.9e-98 362.1 285 65.6
Nitab4.5_0003318g0030 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.1e-97 360.5 275 65.8
ECA247G4055 Erigeron canadensis HOM05D005844 ORTHO05D007203 1.5e-97 360.1 274 65.7
Cc07_g01570 Coffea canephora HOM05D005844 ORTHO05D007203 4.3e-97 358.6 256 67.6
Eucgr.I01735 Eucalyptus grandis HOM05D005844 ORTHO05D007203 4.3e-97 358.6 277 64.3
C04p47350 Brassica napus HOM05D005844 ORTHO05D007203 7.3e-97 357.8 287 64.1
Dinv07356 Davidia involucrata HOM05D005844 ORTHO05D007203 9.6e-97 357.5 250 67.6
DCAR_021727 Daucus carota HOM05D005844 ORTHO05D007203 3.6e-96 355.5 221 75.1
AL7G49290 Arabidopsis lyrata HOM05D005844 ORTHO05D007203 4.8e-96 355.1 228 73.7
PSO407G0181 Papaver somniferum HOM05D005844 ORTHO05D007203 4.8e-96 355.1 245 70.6
A04p13570 Brassica napus HOM05D005844 ORTHO05D007203 8.1e-96 354.4 286 63.6
Sopen02g037980 Solanum pennellii HOM05D005844 ORTHO05D007203 8.1e-96 354.4 274 65.0
Haze_14753 Corylus avellana HOM05D005844 ORTHO05D007203 1.1e-95 354.0 270 65.6
Cfa007344 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.8e-95 353.2 253 69.6
Migut.K01404 Erythranthe guttata HOM05D005844 ORTHO05D007203 2.4e-95 352.8 281 64.8
Thhalv10027875m.g Eutrema salsugineum HOM05D005844 ORTHO05D007203 2.4e-95 352.8 286 62.2
Medtr2g062880 Medicago truncatula HOM05D005844 ORTHO05D007203 3.1e-95 352.4 250 67.2
VMungo0464G1123 Vigna mungo HOM05D005844 ORTHO05D007203 5.3e-95 351.7 227 70.0
BcaB06g27527 Brassica carinata HOM05D005844 ORTHO05D007203 2.6e-94 349.4 283 62.2
Lj1g0026070 Lotus japonicus HOM05D005844 ORTHO05D007203 2.6e-94 349.4 240 69.2
PSO111G0092 Papaver somniferum HOM05D005844 ORTHO05D007203 2.6e-94 349.4 245 69.8
PGSC0003DMG400012605 Solanum tuberosum HOM05D005844 ORTHO05D007203 2.6e-94 349.4 277 62.8
AT5G40530 Arabidopsis thaliana HOM05D005844 ORTHO05D007203 3.4e-94 349.0 269 65.1
Phvul.004G044500 Phaseolus vulgaris HOM05D005844 ORTHO05D007203 4.5e-94 348.6 270 63.3
Carub.0007s3499 Capsella rubella HOM05D005844 ORTHO05D007203 1.3e-93 347.1 284 63.7
Lalb_Chr08g0243241 Lupinus albus HOM05D005844 ORTHO05D007203 1.7e-93 346.7 278 61.9
Medtr7g033530 Medicago truncatula HOM05D005844 ORTHO05D007203 2.2e-93 346.3 250 67.2
unitig_46.g18705 Utricularia gibba HOM05D005844 ORTHO05D007203 4.9e-93 345.1 276 62.7
Aa31LG9G1090 Aethionema arabicum HOM05D005844 ORTHO05D007203 1.1e-92 344.0 282 61.0
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 5.4e-92 341.7 221 69.7
Zm00001eb205620 Zea mays HOM05D005844 ORTHO05D007203 9.3e-92 340.9 229 67.7
HPP92_020245 Vanilla planifolia HOM05D005844 ORTHO05D007203 1.2e-91 340.5 277 59.6
MELO3C021585.2 Cucumis melo HOM05D005844 ORTHO05D007203 1.6e-91 340.1 282 62.4
Nitab4.5_0001860g0130 Nicotiana tabacum HOM05D005844 ORTHO05D007203 7.9e-91 337.8 276 63.0
Os02g0593900 Oryza sativa ssp. japonica HOM05D005844 ORTHO05D007203 5.1e-90 335.1 236 65.7
CSS0002651 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 2.5e-89 332.8 254 64.2
Psat4g044480 Pisum sativum HOM05D005844 ORTHO05D007203 3.3e-89 332.4 297 57.6
ATR0824G194 Amborella trichopoda HOM05D005844 ORTHO05D007203 9.6e-89 330.9 284 58.5
CDE09G0856 Ceratophyllum demersum HOM05D005844 ORTHO05D007203 3.8e-85 318.9 201 71.6
Glyma.19G056800 Glycine max HOM05D005844 ORTHO05D007203 4.9e-85 318.5 260 60.0
SMO169G0126 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 9.3e-84 314.3 221 67.0
Sed0014974 Sechium edule HOM05D005844 ORTHO05D007203 7.9e-83 311.2 237 67.9
BraA04t17017Z Brassica rapa HOM05D005844 ORTHO05D007203 1.3e-82 310.5 266 61.3
BolC4t26336H Brassica oleracea HOM05D005844 ORTHO05D007203 1.1e-81 307.4 266 60.9
PSO754G0028 Papaver somniferum HOM05D005844 ORTHO05D007203 1.9e-81 306.6 250 59.6
Lj7A600G48 Lonicera japonica HOM05D005844 ORTHO05D007203 2.5e-81 306.2 183 78.1
Mapoly0055s0119 Marchantia polymorpha HOM05D005844 ORTHO05D007203 2.5e-81 306.2 226 61.5
Ca_08532_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 2.1e-80 303.1 269 57.6
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis HOM05D005844 ORTHO05D007203 3.7e-80 302.4 228 63.6
Ca_25854_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 1.2e-78 297.4 221 64.7
Pp3c18_8570 Physcomitrium patens HOM05D005844 ORTHO05D007203 1.5e-78 297.0 231 61.0
Glyma.16G069400 Glycine max HOM05D005844 ORTHO05D007203 4.5e-78 295.4 233 61.4
TAR629G2614 Trochodendron aralioides HOM05D005844 ORTHO05D007203 4.5e-78 295.4 230 66.1
Peaxi162Scf00129g01647 Petunia axillaris HOM05D005844 ORTHO05D007203 5.8e-78 295.0 203 69.0
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea HOM05D005844 ORTHO05D007203 1.0e-77 294.3 260 57.7
VMungo1215G2157 Vigna mungo HOM05D005844 ORTHO05D007203 1.0e-77 294.3 221 62.0
Hma1.2p1_1747F.1_g300470 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 9.3e-76 287.7 183 74.3
CARHR261450 Cardamine hirsuta HOM05D005844 ORTHO05D007203 6.0e-75 285.0 179 75.4
EL10Ac6g14092 Beta vulgaris HOM05D005844 ORTHO05D007203 3.9e-74 282.3 274 55.5
MBI06_g16054_MAGBIO Magnolia biondii HOM05D005844 ORTHO05D007203 3.9e-74 282.3 300 53.3
Lsat_1_v5_gn_1_11001 Lactuca sativa HOM05D005844 ORTHO05D007203 1.5e-73 280.4 175 77.1
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 2.0e-70 270.0 272 51.8
Cfa007349 Carpinus fangiana HOM05D005844 ORTHO05D007203 7.2e-68 261.5 247 58.3
CAN.G473.16 Capsicum annuum HOM05D005844 ORTHO05D007203 1.8e-66 256.9 161 75.8
MCO16G365 Micromonas commoda HOM05D005844 ORTHO05D007203 1.2e-62 244.2 231 55.4
Ah.03g137020 Amaranthus hybridus HOM05D001812 ORTHO05D001874 4.5e-62 242.3 192 62.5
Cre07.g323450 Chlamydomonas reinhardtii HOM05D005844 ORTHO05D007203 1.4e-50 204.1 265 40.0
Atru.chr6.2417 Acer truncatum HOM05D005844 ORTHO05D007203 2.6e-46 189.9 113 78.8
SHI16461 Sapria himalayana HOM05D005844 ORTHO05D007203 1.0e-45 188.0 309 37.2
TPR.G1078 Trifolium pratense HOM05D005844 ORTHO05D007203 9.4e-44 181.4 129 65.9
vmacro09039 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 2.1e-43 180.3 285 42.1
TPR.G11046 Trifolium pratense HOM05D005844 ORTHO05D007203 1.8e-42 177.2 146 59.6
TPR.G35964 Trifolium pratense HOM05D005844 ORTHO05D007203 3.7e-40 169.5 113 69.9
PRCOL_00001214 Prasinoderma coloniale HOM05D005844 ORTHO05D007203 8.3e-40 168.3 296 35.5
TAR629G1250 Trochodendron aralioides HOM05D005844 ORTHO05D007203 1.7e-37 160.6 127 62.2
SMO202G0011 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 7.2e-36 155.2 116 64.7
BolC4t27198H Brassica oleracea HOM05D005844 ORTHO05D007203 1.2e-27 127.9 171 46.8
Atru.chr2.3681 Acer truncatum HOM05D005844 ORTHO05D007203 1.6e-27 127.5 77 76.6
QL12p001810 Quercus lobata HOM05D005844 ORTHO05D007203 2.3e-26 123.6 84 69.0
Rhsim10G0015100 Rhododendron simsii HOM05D014363 ORTHO05D019497 2.6e-25 120.2 77 70.1
Cfa024741 Carpinus fangiana HOM05D005844 ORTHO05D007203 2.8e-24 116.7 252 32.5
SEGI_32629 Sequoiadendron giganteum HOM05D005844 ORTHO05D007203 3.2e-23 113.2 81 65.4
AUR62043289 Chenopodium quinoa HOM05D005844 ORTHO05D007203 2.6e-17 93.6 78 57.7
CARHR261460 Cardamine hirsuta HOM05D005844 ORTHO05D007203 1.3e-16 91.3 56 75.0
SHI16462 Sapria himalayana HOM05D005844 ORTHO05D007203 5.2e-10 69.3 114 43.9


User provided reference genes

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