Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1181 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.1e-80 300.4 161 100.0
FvH4_6g20911 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-38 163.7 94 87.2
RcHm_v2.0_Chr1g0340611 Rosa chinensis HOM05D000539 ORTHO05D000233 2.5e-20 102.8 84 61.9
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 4.2e-20 102.1 84 60.7
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-19 100.1 85 58.8
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 4.7e-19 98.6 84 58.3
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 2.2e-16 89.7 84 54.8
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 2.2e-16 89.7 84 54.8
RcHm_v2.0_Chr2g0095181 Rosa chinensis HOM05D000539 ORTHO05D000233 1.8e-15 86.7 84 51.2
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 2.0e-14 83.2 88 48.9
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 2.0e-14 83.2 88 48.9
RcHm_v2.0_Chr5g0072071 Rosa chinensis HOM05D000539 ORTHO05D000592 5.0e-13 78.6 88 45.5
RcHm_v2.0_Chr6g0286411 Rosa chinensis HOM05D000539 ORTHO05D000233 5.0e-13 78.6 83 47.0
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-12 77.4 92 41.3
FAN19G0618 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.9e-12 76.6 94 47.9
FvH4_1g25001 Fragaria vesca HOM05D000539 ORTHO05D000233 2.5e-12 76.3 89 48.3
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 4.2e-12 75.5 92 42.4
RcHm_v2.0_Chr7g0201281 Rosa chinensis HOM05D000539 ORTHO05D000233 7.2e-12 74.7 89 42.7
FvH4_6g22902 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-11 73.9 88 48.9
RcHm_v2.0_Chr4g0395771 Rosa chinensis HOM05D000539 ORTHO05D000592 1.6e-11 73.6 95 40.0
RcHm_v2.0_Chr5g0045831 Rosa chinensis HOM05D000539 ORTHO05D000592 6.7e-10 68.2 72 44.4
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 2.0e-09 66.6 92 42.4
FvH4_6g32742 Fragaria vesca HOM05D000539 ORTHO05D000233 3.3e-09 65.9 84 41.7
FAN22G0175 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.3e-09 65.9 95 38.9
FvH4_3g23522 Fragaria vesca HOM05D000539 ORTHO05D000233 5.7e-09 65.1 84 40.5
Prupe.3G107500 Prunus persica HOM05D000539 ORTHO05D000233 5.7e-09 65.1 96 43.8
RcHm_v2.0_Chr5g0071741 Rosa chinensis HOM05D000539 ORTHO05D000233 5.7e-09 65.1 70 45.7
FvH4_4g05701 Fragaria vesca HOM05D000539 ORTHO05D000233 9.7e-09 64.3 84 40.5
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.7e-09 64.3 92 41.3
FvH4_4g04601 Fragaria vesca HOM05D000539 ORTHO05D000233 1.3e-08 63.9 92 41.3
FvH4_5g31943 Fragaria vesca HOM05D000539 ORTHO05D000233 1.3e-08 63.9 96 36.5
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-08 63.9 70 45.7
FAN09G4072 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.8e-08 62.8 108 33.3
FvH4_1g26740 Fragaria vesca HOM05D000539 ORTHO05D000592 3.7e-08 62.4 84 42.9
FvH4_7g02993 Fragaria vesca HOM05D000539 ORTHO05D000233 3.7e-08 62.4 108 33.3
FAN19G2795 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.7e-08 62.4 84 42.9
Prupe.1G130900 Prunus persica HOM05D000539 ORTHO05D000233 6.3e-08 61.6 91 45.1
FvH4_3g30441 Fragaria vesca HOM05D000539 ORTHO05D000592 8.2e-08 61.2 108 32.4
FvH4_5g23293 Fragaria vesca HOM05D000539 ORTHO05D000233 8.2e-08 61.2 84 42.9
FvH4_3g19213 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-07 60.8 108 32.4
FvH4_7g07223 Fragaria vesca HOM05D000539 ORTHO05D000592 1.4e-07 60.5 85 41.2
RcHm_v2.0_Chr7g0228371 Rosa chinensis HOM05D000539 ORTHO05D000233 2.4e-07 59.7 72 41.7
FvH4_3g31624 Fragaria vesca HOM05D000539 ORTHO05D000592 3.1e-07 59.3 84 42.9
Prupe.8G054500 Prunus persica HOM05D000539 ORTHO05D000592 3.1e-07 59.3 95 42.1
FvH4_3g18051 Fragaria vesca HOM05D000539 ORTHO05D000592 4.1e-07 58.9 108 31.5
Prupe.7G029100 Prunus persica HOM05D000539 ORTHO05D000592 4.1e-07 58.9 95 42.1
FvH4_2g04948 Fragaria vesca HOM05D000539 ORTHO05D000233 7.0e-07 58.2 76 46.1
FAN07G1063 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.0e-07 58.2 98 40.8
FvH4_4g10052 Fragaria vesca HOM05D000539 ORTHO05D000233 9.1e-07 57.8 108 31.5
FAN07G0889 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.1e-07 57.8 84 41.7
FAN05G5337 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.2e-06 57.4 84 41.7
FAN09G4698 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.2e-06 57.4 84 41.7
FAN10G2015 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.2e-06 57.4 50 58.0
FAN28G2905 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.2e-06 57.4 97 37.1
Prupe.2G155700 Prunus persica HOM05D000539 ORTHO05D000233 1.2e-06 57.4 91 42.9
FAN06G4635 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.6e-06 57.0 93 41.9
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.6e-06 57.0 86 41.9
Prupe.7G055100 Prunus persica HOM05D000539 ORTHO05D000233 1.6e-06 57.0 90 43.3
FAN04G1988 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.0e-06 56.6 87 43.7
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.0e-06 56.6 87 43.7
FAN16G1455 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.0e-06 56.6 87 43.7
FAN16G2445 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.0e-06 56.6 87 43.7
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.0e-06 56.6 87 43.7
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.0e-06 56.6 87 43.7
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.0e-06 56.6 87 43.7
FAN23G0124 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.0e-06 56.6 87 43.7
FAN23G1524 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.0e-06 56.6 73 42.5
FAN23G2368 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.0e-06 56.6 87 43.7
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.0e-06 56.6 87 43.7
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.0e-06 56.6 87 43.7
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.6e-06 56.2 87 43.7
FAN20G0566 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.5e-06 55.8 74 45.9
FAN24G0422 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.5e-06 55.8 74 45.9
RcHm_v2.0_Chr6g0271081 Rosa chinensis HOM05D000539 ORTHO05D000233 4.5e-06 55.5 70 41.4
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 5.9e-06 55.1 68 42.6
FAN21G1576 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.9e-06 55.1 52 53.8


User provided reference genes

Program Settings