Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.8e-179 631.7 296 100.0
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 8.7e-173 610.1 294 96.9
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.4e-162 575.5 276 97.5
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 3.7e-147 525.0 250 98.4
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 6.8e-141 504.2 250 94.8
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 8.0e-126 454.1 250 82.8
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 3.0e-125 452.2 250 82.0
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 1.5e-124 449.9 250 82.8
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 2.6e-124 449.1 250 82.0
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 5.7e-124 448.0 250 81.6
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 1.7e-123 446.4 250 80.8
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.7e-123 445.3 250 81.6
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 6.4e-123 444.5 250 81.6
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 6.4e-123 444.5 250 81.6
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.4e-122 443.4 250 79.6
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 1.4e-122 443.4 248 80.2
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 4.1e-122 441.8 250 79.2
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 9.2e-122 440.7 250 79.6
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 1.1e-119 433.7 250 78.0
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 4.3e-119 431.8 250 79.2
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 3.6e-118 428.7 251 78.5
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.0e-117 427.2 250 75.2
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 1.8e-117 426.4 245 81.6
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 5.2e-117 424.9 251 75.7
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 1.5e-116 423.3 251 74.5
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 2.0e-116 422.9 251 75.3
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 7.5e-116 421.0 251 74.9
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 1.7e-115 419.9 251 74.5
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 3.7e-115 418.7 250 76.0
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 3.7e-115 418.7 251 74.5
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 4.9e-115 418.3 250 75.2
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 2.4e-114 416.0 250 76.0
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 7.0e-114 414.5 250 76.0
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 7.0e-114 414.5 251 73.7
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 7.0e-114 414.5 246 76.0
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 1.2e-113 413.7 250 76.0
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 1.7e-112 409.8 252 75.0
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 6.6e-112 407.9 250 76.0
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 8.6e-112 407.5 252 74.2
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 1.5e-111 406.8 252 73.8
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 1.9e-111 406.4 252 73.8
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 1.9e-111 406.4 249 72.3
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 2.5e-111 406.0 253 72.7
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 3.3e-111 405.6 250 74.4
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 5.6e-111 404.8 250 72.4
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 7.3e-111 404.4 250 73.2
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 3.6e-110 402.1 251 74.5
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 3.6e-110 402.1 250 72.8
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 6.2e-110 401.4 250 72.0
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 6.2e-110 401.4 250 72.0
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 8.1e-110 401.0 250 72.4
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 1.1e-109 400.6 252 71.4
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 1.4e-109 400.2 255 71.4
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 1.8e-109 399.8 252 72.6
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 2.3e-109 399.4 250 72.8
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 5.2e-109 398.3 250 70.4
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 6.8e-109 397.9 252 71.4
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 1.2e-108 397.1 252 71.8
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 1.5e-108 396.7 250 72.8
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 7.5e-108 394.4 250 71.2
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 1.7e-107 393.3 252 70.6
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 2.2e-107 392.9 250 69.6
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 2.2e-107 392.9 252 71.4
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 3.7e-107 392.1 250 69.6
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 4.9e-107 391.7 250 70.4
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 1.1e-106 390.6 248 72.2
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 4.1e-106 388.7 250 70.4
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 2.1e-105 386.3 250 67.6
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 7.8e-105 384.4 228 76.8
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 3.0e-104 382.5 250 72.4
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 1.5e-103 380.2 250 69.2
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 9.5e-103 377.5 250 72.8
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 1.1e-101 374.0 262 66.4
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 2.0e-100 369.8 250 66.4
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 3.4e-100 369.0 251 66.9
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 5.8e-100 368.2 249 67.1
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 9.9e-100 367.5 253 65.6
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 9.9e-100 367.5 253 65.6
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 9.9e-100 367.5 253 65.6
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 9.9e-100 367.5 253 65.6
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 2.2e-99 366.3 252 65.9
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 3.8e-99 365.5 252 66.7
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 3.8e-99 365.5 250 64.4
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 4.9e-99 365.2 246 67.1
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 1.1e-98 364.0 245 67.8
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 1.4e-98 363.6 252 65.1
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 1.2e-97 360.5 247 66.4
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 2.1e-97 359.8 252 64.3
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 3.5e-97 359.0 252 63.9
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 1.0e-96 357.5 253 64.4
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 1.0e-96 357.5 252 64.7
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 5.1e-96 355.1 252 63.9
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 2.5e-95 352.8 251 64.9
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 4.3e-95 352.1 252 63.9
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 3.1e-93 345.9 203 75.4
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 1.9e-90 336.7 254 61.0
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 2.4e-90 336.3 246 61.4
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 2.7e-89 332.8 237 59.9
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 3.0e-88 329.3 250 59.2
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 6.6e-88 328.2 154 98.1
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 1.1e-79 300.8 248 56.5
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 5.6e-79 298.5 247 55.5
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 2.1e-78 296.6 245 58.4
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.5e-76 290.4 247 55.5
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 4.5e-76 288.9 247 55.1
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 1.3e-70 270.8 250 50.0
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 3.9e-64 249.2 139 84.2
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 3.3e-63 246.1 267 46.8
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 1.1e-61 241.1 249 44.6
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 1.1e-55 221.1 265 47.5
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 3.4e-52 209.5 282 43.3
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 1.2e-49 201.1 111 79.3
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 2.4e-45 186.8 99 88.9
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 5.5e-34 149.1 95 71.6
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 7.7e-28 128.6 108 61.1
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 3.4e-23 113.2 71 63.4
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 1.4e-21 107.8 151 45.0
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 5.9e-20 102.4 54 79.6
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 1.2e-17 94.7 49 77.6
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 6.3e-14 82.4 45 75.6
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 4.0e-08 63.2 136 27.9
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 4.9e-06 56.2 106 34.0


User provided reference genes

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