Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.1e-38 163.3 120 100.0
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 3.3e-38 161.8 120 99.2
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.4e-38 160.6 120 87.5
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.6e-35 152.1 120 94.2
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 3.8e-34 148.3 120 94.2
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 3.0e-31 138.7 120 63.3
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 8.8e-31 137.1 114 65.8
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.2e-29 132.5 76 89.5
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 8.2e-29 130.6 116 62.9
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 4.1e-28 128.3 119 56.3
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 9.1e-28 127.1 114 61.4
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 2.0e-27 125.9 113 60.2
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 4.5e-27 124.8 116 60.3
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 5.9e-27 124.4 119 56.3
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 7.7e-27 124.0 114 59.6
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.3e-26 123.2 76 86.8
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 1.7e-26 122.9 118 59.3
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 1.7e-26 122.9 118 59.3
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 1.7e-26 122.9 119 58.8
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 2.2e-26 122.5 113 59.3
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.9e-26 122.1 114 58.8
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 2.9e-26 122.1 114 58.8
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 5.0e-26 121.3 118 59.3
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 6.5e-26 120.9 113 59.3
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 6.5e-26 120.9 116 57.8
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 8.5e-26 120.6 75 80.0
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 8.5e-26 120.6 116 57.8
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 8.5e-26 120.6 124 56.5
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.1e-25 120.2 116 56.9
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 1.5e-25 119.8 122 57.4
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 1.9e-25 119.4 118 56.8
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.2e-25 118.6 116 55.2
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 3.2e-25 118.6 113 57.5
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 3.2e-25 118.6 114 57.0
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 4.2e-25 118.2 116 54.3
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.2e-25 118.2 116 55.2
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.2e-25 118.2 116 55.2
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 4.2e-25 118.2 115 57.4
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 4.2e-25 118.2 118 55.9
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 4.2e-25 118.2 118 55.1
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 5.5e-25 117.9 111 55.9
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 5.5e-25 117.9 108 59.3
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 7.2e-25 117.5 117 54.7
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 7.2e-25 117.5 117 57.3
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 9.4e-25 117.1 111 57.7
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.2e-24 116.7 121 55.4
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.2e-24 116.7 121 55.4
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 2.1e-24 115.9 111 56.8
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 3.6e-24 115.2 121 73.6
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 4.7e-24 114.8 115 56.5
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 4.7e-24 114.8 123 69.9
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 6.1e-24 114.4 116 71.6
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 6.1e-24 114.4 113 55.8
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.4e-23 113.2 74 77.0
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 3.0e-23 112.1 119 72.3
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 5.2e-23 111.3 122 52.5
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 6.7e-23 110.9 80 71.2
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 6.7e-23 110.9 125 52.8
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 1.2e-22 110.2 115 70.4
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 1.2e-22 110.2 111 54.1
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 1.2e-22 110.2 118 54.2
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.5e-22 109.8 80 71.2
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 2.0e-22 109.4 116 54.3
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 3.3e-22 108.6 123 52.8
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 3.3e-22 108.6 80 70.0
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 3.3e-22 108.6 111 55.9
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.4e-22 108.2 114 54.4
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.4e-22 108.2 114 54.4
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 4.4e-22 108.2 82 68.3
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 4.4e-22 108.2 111 54.1
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 4.4e-22 108.2 81 70.4
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 4.4e-22 108.2 116 52.6
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 4.4e-22 108.2 111 54.1
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 5.7e-22 107.8 75 73.3
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 7.5e-22 107.5 109 54.1
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 7.5e-22 107.5 75 73.3
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 7.5e-22 107.5 111 54.1
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.7e-21 106.3 113 54.0
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 2.2e-21 105.9 112 68.8
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 2.2e-21 105.9 115 51.3
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.2e-21 105.9 75 72.0
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 4.8e-21 104.8 115 60.0
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 4.8e-21 104.8 114 51.8
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 4.8e-21 104.8 113 53.1
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 6.3e-21 104.4 74 70.3
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 6.3e-21 104.4 117 51.3
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 1.4e-20 103.2 112 72.3
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 2.4e-20 102.4 53 96.2
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.4e-20 102.4 53 96.2
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 2.4e-20 102.4 121 50.4
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 5.3e-20 101.3 73 69.9
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 5.3e-20 101.3 112 53.6
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 9.1e-20 100.5 72 68.1
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.0e-19 99.4 72 66.7
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 2.7e-19 99.0 72 66.7
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 3.5e-19 98.6 72 66.7
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 3.5e-19 98.6 69 69.6
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 4.5e-19 98.2 78 67.9
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 4.5e-19 98.2 73 67.1
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 7.7e-19 97.4 69 69.6
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 7.7e-19 97.4 69 69.6
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 7.7e-19 97.4 69 69.6
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 7.7e-19 97.4 69 69.6
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 1.0e-18 97.1 69 69.6
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.7e-18 96.3 78 67.9
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 2.2e-18 95.9 69 68.1
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 2.2e-18 95.9 69 68.1
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 3.8e-18 95.1 69 66.7
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 5.0e-18 94.7 110 47.3
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 6.5e-18 94.4 74 64.9
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 9.4e-17 90.5 75 61.3
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 1.2e-16 90.1 109 42.2
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 2.1e-16 89.4 57 75.4
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 4.7e-16 88.2 96 71.9
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 1.2e-14 83.6 78 60.3
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 2.0e-14 82.8 69 55.1
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 2.0e-11 72.8 71 62.0
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 1.3e-10 70.1 69 52.2
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.7e-10 69.7 43 79.1
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 3.8e-10 68.6 77 50.6
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.1e-09 67.0 69 47.8
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 2.5e-09 65.9 75 50.7
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 7.2e-09 64.3 75 49.3
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.2e-08 63.5 77 46.8
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.2e-08 63.5 77 46.8
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 1.8e-07 59.7 67 44.8
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 1.2e-06 57.0 52 48.1
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 7.5e-06 54.3 35 71.4


User provided reference genes

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