Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0912 Fragaria x ananassa HOM05D002589 ORTHO05D002742 7.9e-23 109.4 48 100.0
FvH4_6g34190 Fragaria vesca HOM05D002589 ORTHO05D002742 3.1e-11 70.9 31 100.0
RcHm_v2.0_Chr2g0144541 Rosa chinensis HOM05D002589 ORTHO05D002742 3.4e-10 67.4 31 96.8
Lalb_Chr07g0180991 Lupinus albus HOM05D002589 ORTHO05D002742 9.3e-08 59.3 32 81.2
Lalb_Chr13g0299581 Lupinus albus HOM05D002589 ORTHO05D002742 9.3e-08 59.3 32 81.2
MD17G1172200 Malus domestica HOM05D002589 ORTHO05D002742 1.2e-07 58.9 32 84.4
Prupe.3G044700 Prunus persica HOM05D002589 ORTHO05D002742 1.2e-07 58.9 32 81.2
Migut.L01531 Erythranthe guttata HOM05D002589 ORTHO05D002742 2.7e-07 57.8 33 75.8
HanXRQChr10g0319541 Helianthus annuus HOM05D002589 ORTHO05D002742 4.6e-07 57.0 32 78.1
Atru.chr7.1647 Acer truncatum HOM05D002589 ORTHO05D002742 7.9e-07 56.2 32 75.0
CSS0001560 Camellia sinensis var. sinensis HOM05D002589 ORTHO05D002742 7.9e-07 56.2 32 75.0
Cpa.g.sc28.118 Carica papaya HOM05D002589 ORTHO05D002742 7.9e-07 56.2 32 75.0
CiPaw.04G147200 Carya illinoinensis HOM05D002589 ORTHO05D002742 7.9e-07 56.2 33 72.7
Ciclev10026845m.g Citrus clementina HOM05D002589 ORTHO05D002742 7.9e-07 56.2 32 78.1
DCAR_024717 Daucus carota HOM05D002589 ORTHO05D002742 7.9e-07 56.2 49 59.2
Duzib235G1089 Durio zibethinus HOM05D002589 ORTHO05D002742 7.9e-07 56.2 32 78.1
Manes.03G037300 Manihot esculenta HOM05D002589 ORTHO05D002742 7.9e-07 56.2 33 75.8
Cc06_g11790 Coffea canephora HOM05D002589 ORTHO05D002742 1.0e-06 55.8 33 72.7
COL.COLO4_18156 Corchorus olitorius HOM05D002589 ORTHO05D002742 1.0e-06 55.8 33 72.7
Duzib150G1235 Durio zibethinus HOM05D002589 ORTHO05D002742 1.0e-06 55.8 33 72.7
Glyma.09G066800 Glycine max HOM05D002589 ORTHO05D002742 1.0e-06 55.8 32 75.0
Gohir.A07G013300 Gossypium hirsutum HOM05D002589 ORTHO05D002742 1.0e-06 55.8 33 72.7
Gohir.D07G013100 Gossypium hirsutum HOM05D002589 ORTHO05D002742 1.0e-06 55.8 33 72.7
Gorai.001G013800 Gossypium raimondii HOM05D002589 ORTHO05D002742 1.0e-06 55.8 33 72.7
Lj6g0020059 Lotus japonicus HOM05D002589 ORTHO05D002742 1.0e-06 55.8 32 75.0
Prupe.7G204400 Prunus persica HOM05D002589 ORTHO05D002742 1.0e-06 55.8 33 75.8
QL05p009425 Quercus lobata HOM05D002589 ORTHO05D002742 1.0e-06 55.8 32 75.0
Thecc.09G082900 Theobroma cacao HOM05D002589 ORTHO05D002742 1.0e-06 55.8 33 72.7
VMungo1309G0119 Vigna mungo HOM05D002589 ORTHO05D002742 1.0e-06 55.8 32 75.0
CSS0041317 Camellia sinensis var. sinensis HOM05D002589 ORTHO05D002742 1.3e-06 55.5 33 72.7
Ca_02587_v3 Cicer arietinum L. HOM05D002589 ORTHO05D002742 1.3e-06 55.5 32 75.0
Dinv42352 Davidia involucrata HOM05D002589 ORTHO05D002742 1.3e-06 55.5 33 72.7
Lsat_1_v5_gn_8_86200 Lactuca sativa HOM05D002589 ORTHO05D002742 1.3e-06 55.5 32 71.9
Oeu011591.1 Olea europaea HOM05D002589 ORTHO05D002742 1.3e-06 55.5 33 72.7
Peaxi162Scf00498g00524 Petunia axillaris HOM05D002589 ORTHO05D002742 1.3e-06 55.5 33 72.7
Psat1g018480 Pisum sativum HOM05D002589 ORTHO05D002742 1.3e-06 55.5 32 75.0
TPR.G9460 Trifolium pratense HOM05D002589 ORTHO05D002742 1.3e-06 55.5 32 75.0
TWI34G1556 Tripterygium wilfordii HOM05D002589 ORTHO05D002742 1.3e-06 55.5 33 72.7
TAR362G1124 Trochodendron aralioides HOM05D002589 ORTHO05D002742 1.3e-06 55.5 32 75.0
GSVIVG01016819001 Vitis vinifera HOM05D002589 ORTHO05D002742 1.3e-06 55.5 32 75.0
AL7G26920 Arabidopsis lyrata HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 71.9
AL8G32970 Arabidopsis lyrata HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 71.9
AT5G57060 Arabidopsis thaliana HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 71.9
CANSAT56G1824 Cannabis sativa HOM05D002589 ORTHO05D002742 1.8e-06 55.1 33 72.7
Carub.0008s1757 Capsella rubella HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 71.9
CARHR270820 Cardamine hirsuta HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 71.9
Ca_21302_v3 Cicer arietinum L. HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 75.0
Ca_23354_v3 Cicer arietinum L. HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 75.0
Glyma.07G035300 Glycine max HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 75.0
Glyma.16G004700 Glycine max HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 75.0
Gohir.D04G008900 Gossypium hirsutum HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 75.0
Gorai.012G010700 Gossypium raimondii HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 75.0
MD09G1187700 Malus domestica HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 81.2
Potri.003G044400 Populus trichocarpa HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 71.9
Thecc.06G116300 Theobroma cacao HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 75.0
TPR.G9773 Trifolium pratense HOM05D002589 ORTHO05D002742 1.8e-06 55.1 32 75.0
Gohir.A05G406700 Gossypium hirsutum HOM05D002589 ORTHO05D002742 2.3e-06 54.7 32 75.0
Lj3g0009757 Lotus japonicus HOM05D002589 ORTHO05D002742 2.3e-06 54.7 32 75.0
MBI05_g15989_MAGBIO Magnolia biondii HOM05D002589 ORTHO05D002742 2.3e-06 54.7 32 75.0
Nn6g35556 Nelumbo nucifera HOM05D002589 ORTHO05D002742 2.3e-06 54.7 32 75.0
Nn8g38761 Nelumbo nucifera HOM05D002589 ORTHO05D002742 2.3e-06 54.7 32 75.0
PSO063G6395 Papaver somniferum HOM05D002589 ORTHO05D002742 2.3e-06 54.7 32 75.0
PSO210G3231 Papaver somniferum HOM05D002589 ORTHO05D002742 2.3e-06 54.7 32 75.0
PSO832G2994 Papaver somniferum HOM05D002589 ORTHO05D002742 2.3e-06 54.7 32 75.0
Potri.001G198700 Populus trichocarpa HOM05D002589 ORTHO05D002742 2.3e-06 54.7 32 71.9
TAR624G1360 Trochodendron aralioides HOM05D002589 ORTHO05D002742 2.3e-06 54.7 32 75.0
unitig_8.g3527 Utricularia gibba HOM05D002589 ORTHO05D002742 2.3e-06 54.7 32 75.0
Aa31LG10G820 Aethionema arabicum HOM05D002589 ORTHO05D002742 3.0e-06 54.3 31 74.2
MSTRG.10531 Avicennia marina HOM05D002589 ORTHO05D002742 3.0e-06 54.3 33 72.7
CAN.G825.22 Capsicum annuum HOM05D002589 ORTHO05D002742 3.0e-06 54.3 32 71.9
CiPaw.01G221700 Carya illinoinensis HOM05D002589 ORTHO05D002742 3.0e-06 54.3 31 77.4
MD15G1212300 Malus domestica HOM05D002589 ORTHO05D002742 3.0e-06 54.3 32 75.0
Manes.16G099000 Manihot esculenta HOM05D002589 ORTHO05D002742 3.0e-06 54.3 33 69.7
Hund25961 Selenicereus undatus HOM05D002589 ORTHO05D002742 3.0e-06 54.3 32 71.9
vmacro06305 Vaccinium macrocarpon HOM05D002589 ORTHO05D002742 3.0e-06 54.3 33 72.7
Atru.chr2.887 Acer truncatum HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
Actinidia38460 Actinidia chinensis HOM05D002589 ORTHO05D002742 3.9e-06 53.9 33 69.7
arahy.Tifrunner.gnm1.ann1.33FSKS Arachis hypogaea HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
arahy.Tifrunner.gnm1.ann1.CL9B6T Arachis hypogaea HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
arahy.Tifrunner.gnm1.ann1.K7L4LL Arachis hypogaea HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
Dinv30367 Davidia involucrata HOM05D002995 ORTHO05D002742 3.9e-06 53.9 32 71.9
Duzib168G1292 Durio zibethinus HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
ECA234G0606 Erigeron canadensis HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
HanXRQChr10g0312331 Helianthus annuus HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
HanXRQChr12g0354531 Helianthus annuus HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
PSO210G2713 Papaver somniferum HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 75.0
Peaxi162Scf00207g01423 Petunia axillaris HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
Phvul.010G134300 Phaseolus vulgaris HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
PGR142G0928 Punica granatum HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
QL02p061798 Quercus lobata HOM05D002589 ORTHO05D002742 3.9e-06 53.9 33 69.7
Solyc07g041010.3 Solanum lycopersicum HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
Sopen07g020140 Solanum pennellii HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
PGSC0003DMG400014102 Solanum tuberosum HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
SGA_v2.0_scaffold21G09446 Striga asiatica HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
SGA_v2.0_scaffold23G10048 Striga asiatica HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
TWI32G1109 Tripterygium wilfordii HOM05D002589 ORTHO05D002742 3.9e-06 53.9 33 69.7
TWI63G0366 Tripterygium wilfordii HOM05D002589 ORTHO05D002742 3.9e-06 53.9 32 71.9
BcaB03g12492 Brassica carinata HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
BcaC07g38220 Brassica carinata HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
A08p20920 Brassica napus HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
C08p09770 Brassica napus HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
BolC8t48648H Brassica oleracea HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
BraA08t34045Z Brassica rapa HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
CARHR233570 Cardamine hirsuta HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
DCAR_031947 Daucus carota HOM05D002589 ORTHO05D002742 5.1e-06 53.5 33 72.7
Thhalv10014992m.g Eutrema salsugineum HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
Thhalv10026549m.g Eutrema salsugineum HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
Glyma.13G107100 Glycine max HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 71.9
Glyma.17G052300 Glycine max HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 71.9
Medtr4g125770 Medicago truncatula HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 71.9
Phvul.003G134000 Phaseolus vulgaris HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 71.9
Phvul.009G229600 Phaseolus vulgaris HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 71.9
PGR044G1669 Punica granatum HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 71.9
Sabra01G0155900 Salix brachista HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
Sp6g18780 Schrenkiella parvula HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
Sp7g24070 Schrenkiella parvula HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 68.8
VMungo1215G1401 Vigna mungo HOM05D002589 ORTHO05D002742 5.1e-06 53.5 32 71.9
CDE03G0437 Ceratophyllum demersum HOM05D002589 ORTHO05D002742 6.7e-06 53.1 32 71.9
CDE04G2015 Ceratophyllum demersum HOM05D002589 ORTHO05D002742 6.7e-06 53.1 32 71.9
Dinv36797 Davidia involucrata HOM05D002589 ORTHO05D002742 6.7e-06 53.1 31 74.2
ECA236G2133 Erigeron canadensis HOM05D002589 ORTHO05D002742 6.7e-06 53.1 32 68.8
Lsat_1_v5_gn_5_143500 Lactuca sativa HOM05D002589 ORTHO05D002742 6.7e-06 53.1 32 68.8
Medtr8g018810 Medicago truncatula HOM05D002589 ORTHO05D002742 6.7e-06 53.1 31 74.2
Psat4g184360 Pisum sativum HOM05D002589 ORTHO05D002742 6.7e-06 53.1 31 74.2
FvH4_1g08050 Fragaria vesca HOM05D002589 ORTHO05D002742 8.7e-06 52.8 32 71.9
FAN26G0077 Fragaria x ananassa HOM05D002589 ORTHO05D002742 8.7e-06 52.8 32 71.9
Glyma.15G172800 Glycine max HOM05D002589 ORTHO05D002742 8.7e-06 52.8 30 73.3
Gohir.D10G059000 Gossypium hirsutum HOM05D002589 ORTHO05D002742 8.7e-06 52.8 32 68.8
Lalb_Chr01g0013551 Lupinus albus HOM05D002589 ORTHO05D002742 8.7e-06 52.8 32 71.9
MD02G1085200 Malus domestica HOM05D002589 ORTHO05D002742 8.7e-06 52.8 32 71.9
Oeu002489.1 Olea europaea HOM05D002589 ORTHO05D002742 8.7e-06 52.8 34 64.7
RcHm_v2.0_Chr2g0094101 Rosa chinensis HOM05D002589 ORTHO05D002742 8.7e-06 52.8 32 71.9
PGSC0003DMG400004856 Solanum tuberosum HOM05D002589 ORTHO05D002742 8.7e-06 52.8 32 68.8
GSVIVG01036215001 Vitis vinifera HOM05D002589 ORTHO05D002742 8.7e-06 52.8 32 71.9
Zm00001eb337650 Zea mays HOM05D002589 ORTHO05D002742 8.7e-06 52.8 32 75.0


User provided reference genes

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