Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.2e-94 349.7 172 100.0
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.2e-91 339.0 172 97.1
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.7e-91 338.2 172 97.1
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 1.6e-89 332.8 172 96.5
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 5.9e-89 330.9 172 95.9
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 8.1e-78 293.9 172 86.6
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.3e-59 233.4 172 69.8
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 2.8e-46 189.1 149 66.4
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 3.5e-41 172.2 162 59.3
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 2.3e-40 169.5 101 82.2
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 5.1e-40 168.3 101 81.2
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 1.5e-39 166.8 149 60.4
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 1.5e-39 166.8 109 77.1
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 1.9e-39 166.4 140 62.1
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 2.5e-39 166.0 156 58.3
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 2.5e-39 166.0 105 76.2
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 4.3e-39 165.2 113 74.3
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 1.3e-38 163.7 110 74.5
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.1e-38 162.9 104 77.9
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.1e-38 162.9 104 77.9
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 2.1e-38 162.9 106 77.4
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 2.8e-38 162.5 174 54.0
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 2.8e-38 162.5 169 54.4
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 3.7e-38 162.2 101 78.2
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 3.7e-38 162.2 153 57.5
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 6.2e-38 161.4 103 75.7
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 8.2e-38 161.0 118 68.6
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 8.2e-38 161.0 115 71.3
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 1.8e-37 159.8 101 77.2
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 2.4e-37 159.5 94 79.8
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 3.1e-37 159.1 101 76.2
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 3.1e-37 159.1 162 54.9
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 4.0e-37 158.7 131 63.4
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 5.3e-37 158.3 92 82.6
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 5.3e-37 158.3 100 76.0
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 6.9e-37 157.9 101 75.2
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 9.0e-37 157.5 93 78.5
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 1.5e-36 156.8 124 66.9
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 2.0e-36 156.4 167 54.5
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 2.6e-36 156.0 93 82.8
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 2.6e-36 156.0 101 76.2
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 3.4e-36 155.6 111 69.4
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 3.4e-36 155.6 159 57.2
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 3.4e-36 155.6 93 79.6
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 3.4e-36 155.6 124 66.1
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 4.5e-36 155.2 96 76.0
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 4.5e-36 155.2 93 77.4
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 4.5e-36 155.2 124 66.9
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 4.5e-36 155.2 95 78.9
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 5.8e-36 154.8 133 61.7
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 5.8e-36 154.8 132 64.4
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 7.6e-36 154.5 167 55.1
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 1.3e-35 153.7 93 78.5
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 1.3e-35 153.7 93 78.5
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 1.3e-35 153.7 93 78.5
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 1.7e-35 153.3 162 53.1
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 1.7e-35 153.3 93 77.4
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 1.7e-35 153.3 93 77.4
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 1.7e-35 153.3 93 77.4
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 2.2e-35 152.9 124 64.5
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 2.2e-35 152.9 124 64.5
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 2.9e-35 152.5 101 75.2
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 4.9e-35 151.8 93 77.4
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 4.9e-35 151.8 94 76.6
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 6.5e-35 151.4 161 51.6
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 6.5e-35 151.4 171 49.7
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 6.5e-35 151.4 119 64.7
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 8.4e-35 151.0 98 75.5
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 8.4e-35 151.0 98 75.5
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 1.1e-34 150.6 93 76.3
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.1e-34 150.6 115 67.0
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 1.1e-34 150.6 94 77.7
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 1.4e-34 150.2 100 73.0
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 1.4e-34 150.2 100 73.0
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 2.5e-34 149.4 176 49.4
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 5.5e-34 148.3 93 75.3
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 5.5e-34 148.3 93 75.3
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 7.1e-34 147.9 123 63.4
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 9.3e-34 147.5 109 67.9
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 2.1e-33 146.4 99 71.7
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 4.6e-33 145.2 130 59.2
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 7.9e-33 144.4 95 72.6
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 6.7e-32 141.4 116 63.8
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 8.7e-32 141.0 113 61.9
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.1e-31 140.6 95 70.5
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 1.5e-31 140.2 152 56.6
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 8.2e-30 134.4 94 68.1
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 4.5e-28 128.6 70 85.7
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.3e-27 127.1 62 100.0
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 1.7e-27 126.7 79 77.2
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 3.6e-25 119.0 76 72.4
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 6.1e-25 118.2 93 64.5
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 1.0e-24 117.5 124 56.5
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 1.1e-23 114.0 64 84.4
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 1.4e-21 107.1 63 79.4
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 9.1e-21 104.4 63 74.6
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 2.6e-20 102.8 63 74.6
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 4.5e-20 102.1 109 51.4
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 5.0e-19 98.6 62 74.2


User provided reference genes

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