Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0766 Fragaria x ananassa HOM05D004471 ORTHO05D005345 2.9e-99 365.2 177 100.0
FAN09G1403 Fragaria x ananassa HOM05D004471 ORTHO05D005345 6.5e-99 364.0 177 99.4
FAN05G4093 Fragaria x ananassa HOM05D004471 ORTHO05D005345 8.5e-99 363.6 177 99.4
FvH4_6g04260 Fragaria vesca HOM05D004471 ORTHO05D005345 2.5e-98 362.1 177 98.9
FAN14G3038 Fragaria x ananassa HOM05D004471 ORTHO05D005345 1.1e-93 346.7 171 97.1
FAN05G1097 Fragaria x ananassa HOM05D004471 ORTHO05D005345 5.3e-93 344.4 167 99.4
FAN09G1313 Fragaria x ananassa HOM05D004471 ORTHO05D005345 5.3e-93 344.4 167 99.4
MD00G1052700 Malus domestica HOM05D004471 ORTHO05D005345 2.7e-92 342.0 177 94.9
MD12G1229300 Malus domestica HOM05D004471 ORTHO05D005345 2.2e-91 339.0 177 94.9
Prupe.6G334800 Prunus persica HOM05D004471 ORTHO05D005345 9.4e-90 333.6 168 95.2
RcHm_v2.0_Chr3g0452951 Rosa chinensis HOM05D004471 ORTHO05D005345 2.7e-89 332.0 177 91.0
MD12G1230100 Malus domestica HOM05D004471 ORTHO05D005345 1.5e-82 309.7 161 94.4
CiPaw.07G011400 Carya illinoinensis HOM05D004471 ORTHO05D005345 4.7e-81 304.7 175 82.3
QL03p002667 Quercus lobata HOM05D004471 ORTHO05D005345 2.6e-79 298.9 175 82.3
ClCG03G016550 Citrullus lanatus HOM05D004471 ORTHO05D005345 7.5e-79 297.4 175 83.4
MELO3C015368.2 Cucumis melo HOM05D004471 ORTHO05D005345 2.2e-78 295.8 175 83.4
TWI56G0886 Tripterygium wilfordii HOM05D004471 ORTHO05D005345 2.2e-78 295.8 175 81.1
Dinv26586 Davidia involucrata HOM05D004471 ORTHO05D005345 8.3e-78 293.9 175 80.6
VMungo0540G0886 Vigna mungo HOM05D004471 ORTHO05D005345 8.3e-78 293.9 175 79.4
TWI12G0951 Tripterygium wilfordii HOM05D004471 ORTHO05D005345 1.8e-77 292.7 175 79.4
TAR629G0585 Trochodendron aralioides HOM05D004471 ORTHO05D005345 2.4e-77 292.4 175 79.4
Haze_04280 Corylus avellana HOM05D004471 ORTHO05D005345 3.2e-77 292.0 167 82.6
Glyma.19G240000 Glycine max HOM05D004471 ORTHO05D005345 4.1e-77 291.6 175 79.4
Glyma.03G242500 Glycine max HOM05D004471 ORTHO05D005345 5.4e-77 291.2 175 78.9
Sed0002921 Sechium edule HOM05D004471 ORTHO05D005345 7.0e-77 290.8 175 80.6
GSVIVG01021973001 Vitis vinifera HOM05D004471 ORTHO05D005345 7.0e-77 290.8 175 80.6
Lj2g0025202 Lotus japonicus HOM05D004471 ORTHO05D005345 9.2e-77 290.4 175 79.4
Thecc.05G251800 Theobroma cacao HOM05D004471 ORTHO05D005345 9.2e-77 290.4 175 80.0
Lsat_1_v5_gn_5_112921 Lactuca sativa HOM05D004471 ORTHO05D005345 2.7e-76 288.9 175 81.1
Phvul.006G096500 Phaseolus vulgaris HOM05D004471 ORTHO05D005345 2.7e-76 288.9 175 79.4
Duzib177G1077 Durio zibethinus HOM05D004471 ORTHO05D005345 3.5e-76 288.5 175 80.0
CsaV3_1G039430 Cucumis sativus L. HOM05D004471 ORTHO05D005345 4.5e-76 288.1 180 80.6
Nn1g09147 Nelumbo nucifera HOM05D004471 ORTHO05D005345 4.5e-76 288.1 176 77.8
PGR031G3800 Punica granatum HOM05D004471 ORTHO05D005345 5.9e-76 287.7 175 79.4
Actinidia05746 Actinidia chinensis HOM05D004471 ORTHO05D005345 7.8e-76 287.3 175 78.9
Manes.09G160500 Manihot esculenta HOM05D004471 ORTHO05D005345 1.0e-75 287.0 175 78.9
Solyc04g072410.3 Solanum lycopersicum HOM05D004471 ORTHO05D005345 1.3e-75 286.6 175 79.4
Sopen04g028580 Solanum pennellii HOM05D004471 ORTHO05D005345 1.3e-75 286.6 175 79.4
PGSC0003DMG400027544 Solanum tuberosum HOM05D004471 ORTHO05D005345 1.3e-75 286.6 175 79.4
EL10Ac4g09248 Beta vulgaris HOM05D004471 ORTHO05D005345 2.3e-75 285.8 175 77.7
CAN.G617.9 Capsicum annuum HOM05D004471 ORTHO05D005345 2.9e-75 285.4 175 78.9
Eucgr.B01762 Eucalyptus grandis HOM05D004471 ORTHO05D005345 2.9e-75 285.4 175 80.0
Potri.013G031000 Populus trichocarpa HOM05D004471 ORTHO05D005345 2.9e-75 285.4 175 78.9
Gorai.007G263500 Gossypium raimondii HOM05D004471 ORTHO05D005345 3.9e-75 285.0 175 78.3
Gohir.A11G236600 Gossypium hirsutum HOM05D004471 ORTHO05D005345 5.0e-75 284.6 175 78.3
Gohir.D11G247200 Gossypium hirsutum HOM05D004471 ORTHO05D005345 5.0e-75 284.6 175 78.3
CANSAT54G1584 Cannabis sativa HOM05D004471 ORTHO05D005345 6.6e-75 284.3 175 78.9
Sc09g0003490 Simmondsia chinensis HOM05D004471 ORTHO05D005345 8.6e-75 283.9 175 74.9
Duzib106G0566 Durio zibethinus HOM05D004471 ORTHO05D005345 1.1e-74 283.5 175 78.3
Nitab4.5_0002323g0100 Nicotiana tabacum HOM05D004471 ORTHO05D005345 1.1e-74 283.5 175 79.4
Nitab4.5_0007843g0010 Nicotiana tabacum HOM05D004471 ORTHO05D005345 1.5e-74 283.1 175 78.9
Atru.chr2.617 Acer truncatum HOM05D004471 ORTHO05D005345 1.9e-74 282.7 168 80.4
Aqoxy5G00550 Aquilegia oxysepala HOM05D004471 ORTHO05D005345 2.5e-74 282.3 175 77.1
CSS0025209 Camellia sinensis var. sinensis HOM05D004471 ORTHO05D005345 3.3e-74 282.0 175 76.0
Ca_09388_v3 Cicer arietinum L. HOM05D004471 ORTHO05D005345 3.3e-74 282.0 175 77.7
Medtr7g114210 Medicago truncatula HOM05D004471 ORTHO05D005345 4.3e-74 281.6 175 77.1
THA.LOC104818664 Tarenaya hassleriana HOM05D004471 ORTHO05D005345 4.3e-74 281.6 176 77.8
Peaxi162Scf00071g00744 Petunia axillaris HOM05D004471 ORTHO05D005345 5.6e-74 281.2 175 78.3
TPR.G6943 Trifolium pratense HOM05D004471 ORTHO05D005345 7.3e-74 280.8 175 77.1
PSO170G4164 Papaver somniferum HOM05D004471 ORTHO05D005345 1.2e-73 280.0 177 76.3
Hund07017 Selenicereus undatus HOM05D004471 ORTHO05D005345 1.6e-73 279.6 175 77.1
Gohir.A13G100500 Gossypium hirsutum HOM05D004471 ORTHO05D005345 2.1e-73 279.3 175 77.1
Hund21668 Selenicereus undatus HOM05D004471 ORTHO05D005345 3.6e-73 278.5 175 76.6
Cfa006506 Carpinus fangiana HOM05D004471 ORTHO05D005345 6.1e-73 277.7 159 82.4
Cc02_g32300 Coffea canephora HOM05D004471 ORTHO05D005345 6.1e-73 277.7 175 76.6
AL3G15090 Arabidopsis lyrata HOM05D004471 ORTHO05D005345 8.0e-73 277.3 175 74.9
PSO063G3713 Papaver somniferum HOM05D004471 ORTHO05D005345 8.0e-73 277.3 177 75.7
THA.LOC104821699 Tarenaya hassleriana HOM05D004471 ORTHO05D005345 1.4e-72 276.6 175 76.6
AT3G05000 Arabidopsis thaliana HOM05D004471 ORTHO05D005345 1.8e-72 276.2 175 74.3
Migut.I00591 Erythranthe guttata HOM05D004471 ORTHO05D005345 2.3e-72 275.8 175 74.9
Gohir.D13G104100 Gossypium hirsutum HOM05D004471 ORTHO05D005345 3.1e-72 275.4 172 77.9
Ah.06g192940 Amaranthus hybridus HOM05D004471 ORTHO05D005345 4.0e-72 275.0 166 77.1
CARHR079310 Cardamine hirsuta HOM05D004471 ORTHO05D005345 5.2e-72 274.6 175 74.3
Lalb_Chr18g0045321 Lupinus albus HOM05D004471 ORTHO05D005345 5.2e-72 274.6 176 73.3
Carub.0003s0423 Capsella rubella HOM05D004471 ORTHO05D005345 6.8e-72 274.2 175 74.3
HanXRQChr03g0072361 Helianthus annuus HOM05D004471 ORTHO05D005345 2.0e-71 272.7 175 76.0
HanXRQChr14g0442561 Helianthus annuus HOM05D004471 ORTHO05D005345 3.4e-71 271.9 175 75.4
Nn5g28667 Nelumbo nucifera HOM05D004471 ORTHO05D005345 3.4e-71 271.9 173 75.1
Thhalv10021604m.g Eutrema salsugineum HOM05D004471 ORTHO05D005345 4.4e-71 271.6 175 73.7
AUR62000928 Chenopodium quinoa HOM05D004471 ORTHO05D005345 5.8e-71 271.2 167 77.8
arahy.Tifrunner.gnm1.ann1.9WIB0A Arachis hypogaea HOM05D004471 ORTHO05D005345 7.5e-71 270.8 170 73.5
AUR62005042 Chenopodium quinoa HOM05D004471 ORTHO05D005345 1.3e-70 270.0 168 76.8
MSTRG.11237 Avicennia marina HOM05D004471 ORTHO05D005345 1.7e-70 269.6 175 73.1
SGA_v2.0_scaffold143G35756 Striga asiatica HOM05D004471 ORTHO05D005345 1.7e-70 269.6 175 73.7
Os09g0244900 Oryza sativa ssp. japonica HOM05D004471 ORTHO05D005345 2.2e-70 269.2 175 73.1
Ciclev10002639m.g Citrus clementina HOM05D004471 ORTHO05D005345 3.7e-70 268.5 168 78.0
Sp3g03820 Schrenkiella parvula HOM05D004471 ORTHO05D005345 3.7e-70 268.5 175 73.1
HanXRQChr10g0301731 Helianthus annuus HOM05D004471 ORTHO05D005345 4.9e-70 268.1 175 74.3
Lalb_Chr02g0148511 Lupinus albus HOM05D004471 ORTHO05D005345 4.9e-70 268.1 175 72.0
Lj9A676G54 Lonicera japonica HOM05D004471 ORTHO05D005345 8.3e-70 267.3 164 76.8
Os07g0291100 Oryza sativa ssp. japonica HOM05D004471 ORTHO05D005345 8.3e-70 267.3 175 72.0
Lalb_Chr06g0167871 Lupinus albus HOM05D004471 ORTHO05D005345 1.1e-69 266.9 175 71.4
Zm00001eb421350 Zea mays HOM05D004471 ORTHO05D005345 1.1e-69 266.9 171 74.9
Zm00001eb084990 Zea mays HOM05D004471 ORTHO05D005345 1.4e-69 266.5 171 74.3
COL.COLO4_36062 Corchorus olitorius HOM05D004471 ORTHO05D005345 1.9e-69 266.2 227 62.1
DCAR_003298 Daucus carota HOM05D004471 ORTHO05D005345 2.4e-69 265.8 179 73.2
Oeu053263.1 Olea europaea HOM05D004471 ORTHO05D005345 2.4e-69 265.8 168 75.0
Rhsim05G0148100 Rhododendron simsii HOM05D004471 ORTHO05D005345 7.0e-69 264.2 176 71.6
CDE06G1925 Ceratophyllum demersum HOM05D004471 ORTHO05D005345 9.2e-69 263.8 176 69.9
Sabra13G0030200 Salix brachista HOM05D004471 ORTHO05D005345 9.2e-69 263.8 169 75.1
vmacro19660 Vaccinium macrocarpon HOM05D004471 ORTHO05D005345 1.2e-68 263.5 167 76.0
Ah.04g160020 Amaranthus hybridus HOM05D003164 ORTHO05D003575 1.6e-68 263.1 166 75.9
Potri.005G044300 Populus trichocarpa HOM05D004471 ORTHO05D005345 1.6e-68 263.1 175 73.1
Aa31LG5G15450 Aethionema arabicum HOM05D004471 ORTHO05D005345 2.0e-68 262.7 170 72.9
BcaC07g40233 Brassica carinata HOM05D004471 ORTHO05D005345 2.7e-68 262.3 170 73.5
A05p42590 Brassica napus HOM05D004471 ORTHO05D005345 2.7e-68 262.3 170 73.5
C05p62270 Brassica napus HOM05D004471 ORTHO05D005345 2.7e-68 262.3 170 73.5
BolC5t34882H Brassica oleracea HOM05D004471 ORTHO05D005345 2.7e-68 262.3 170 73.5
BraA05t22994Z Brassica rapa HOM05D004471 ORTHO05D005345 3.5e-68 261.9 170 73.5
Manes.08G125300 Manihot esculenta HOM05D004471 ORTHO05D005345 3.5e-68 261.9 175 73.7
unitig_744.g24459 Utricularia gibba HOM05D004471 ORTHO05D005345 6.0e-68 261.2 175 70.9
arahy.Tifrunner.gnm1.ann1.NV1QRL Arachis hypogaea HOM05D004471 ORTHO05D005345 1.3e-67 260.0 175 69.1
SalBow3G0010 Salvia bowleyana HOM05D004471 ORTHO05D005345 1.3e-67 260.0 167 75.4
arahy.Tifrunner.gnm1.ann1.HP6SUR Arachis hypogaea HOM05D004471 ORTHO05D005345 6.6e-67 257.7 175 68.6
SGA_v2.0_scaffold40G15614 Striga asiatica HOM05D004471 ORTHO05D005345 8.6e-67 257.3 176 70.5
Cfa006508 Carpinus fangiana HOM05D004471 ORTHO05D005345 1.9e-66 256.1 156 76.9
Oeu041531.1 Olea europaea HOM05D004471 ORTHO05D005345 1.9e-66 256.1 171 70.8
CSS0028112 Camellia sinensis var. sinensis HOM05D004471 ORTHO05D005345 7.3e-66 254.2 154 79.9
BcaC05g29981 Brassica carinata HOM05D004471 ORTHO05D005345 9.5e-66 253.8 163 73.6
BcaC05g29980 Brassica carinata HOM05D004471 ORTHO05D005345 1.2e-65 253.4 163 73.6
ATR0724G032 Amborella trichopoda HOM05D004471 ORTHO05D005345 4.7e-65 251.5 174 69.5
arahy.Tifrunner.gnm1.ann1.M2LFCZ Arachis hypogaea HOM05D004471 ORTHO05D005345 1.4e-64 250.0 170 68.2
Sabra05G0041100 Salix brachista HOM05D004471 ORTHO05D005345 2.3e-64 249.2 170 71.8
HPP92_003010 Vanilla planifolia HOM05D004471 ORTHO05D005345 5.2e-64 248.1 175 67.4
SHI18238 Sapria himalayana HOM05D004471 ORTHO05D005345 8.9e-64 247.3 175 68.6
SEGI_33381 Sequoiadendron giganteum HOM05D004471 ORTHO05D005345 8.9e-64 247.3 176 68.8
Mapoly0002s0104 Marchantia polymorpha HOM05D004471 ORTHO05D005345 2.0e-63 246.1 176 67.0
ECA240G0709 Erigeron canadensis HOM05D005412 ORTHO05D006096 2.6e-63 245.7 166 73.5
arahy.Tifrunner.gnm1.ann1.MZ802S Arachis hypogaea HOM05D004471 ORTHO05D005345 4.4e-63 245.0 166 69.3
MBI07_g44660_MAGBIO Magnolia biondii HOM05D004471 ORTHO05D005345 3.7e-62 241.9 157 72.6
HPP92_027546 Vanilla planifolia HOM05D004471 ORTHO05D005345 3.5e-60 235.3 168 66.1
SMO347G0444 Selaginella moellendorffii HOM05D004471 ORTHO05D005345 1.1e-58 230.3 173 63.0
Pp3c4_10030 Physcomitrium patens HOM05D004471 ORTHO05D005345 1.6e-57 226.5 172 62.8
Lsat_1_v5_gn_9_110141 Lactuca sativa HOM05D004471 ORTHO05D005345 4.1e-53 211.8 147 74.1
DCAR_022266 Daucus carota HOM05D004471 ORTHO05D005345 6.0e-52 208.0 168 60.1
DCAR_030062 Daucus carota HOM05D004471 ORTHO05D005345 7.8e-52 207.6 168 60.1
Cc00_g16770 Coffea canephora HOM05D004471 ORTHO05D005345 2.6e-47 192.6 122 75.4
Cc00_g29480 Coffea canephora HOM05D004471 ORTHO05D005345 2.6e-47 192.6 122 75.4
Psat3g008960 Pisum sativum HOM05D004471 ORTHO05D005345 2.6e-47 192.6 122 74.6
Eucgr.L02626 Eucalyptus grandis HOM05D004471 ORTHO05D005345 4.4e-47 191.8 122 77.0
AL3G15360 Arabidopsis lyrata HOM05D004471 ORTHO05D005345 2.9e-46 189.1 122 72.1
Cpa.g.sc117.10 Carica papaya HOM05D004471 ORTHO05D005345 6.6e-43 177.9 115 73.9
Gorai.013G116700 Gossypium raimondii HOM05D004471 ORTHO05D005345 1.9e-42 176.4 117 73.5
CBR_g38080 Chara braunii HOM05D004471 ORTHO05D005345 5.3e-40 168.3 190 44.7
Cre16.g663650 Chlamydomonas reinhardtii HOM05D004471 ORTHO05D005345 6.9e-40 167.9 172 46.5
CSS0014300 Camellia sinensis var. sinensis HOM05D002365 ORTHO05D005345 1.1e-37 160.6 86 84.9
RcHm_v2.0_Chr5g0055691 Rosa chinensis HOM05D004471 ORTHO05D005345 1.6e-36 156.8 109 72.5
QL03p002083 Quercus lobata HOM05D004471 ORTHO05D005345 5.1e-35 151.8 95 74.7
Aa31LG1G21870 Aethionema arabicum HOM05D004471 ORTHO05D005345 7.3e-34 147.9 106 67.0
Aa31LG1G24890 Aethionema arabicum HOM05D004471 ORTHO05D005345 7.3e-34 147.9 99 68.7
Aa31LG1G26450 Aethionema arabicum HOM05D004471 ORTHO05D005345 9.6e-34 147.5 112 64.3
arahy.Tifrunner.gnm1.ann1.BCR285 Arachis hypogaea HOM05D004471 ORTHO05D005345 1.5e-23 113.6 60 81.7
MCO16G564 Micromonas commoda HOM05D004471 ORTHO05D005345 2.6e-23 112.8 183 37.7
PRCOL_00002528 Prasinoderma coloniale HOM05D004471 ORTHO05D005345 8.4e-22 107.8 162 38.3
Aa31LG1G25270 Aethionema arabicum HOM05D004471 ORTHO05D005345 2.3e-19 99.8 86 58.1
FAN05G5407 Fragaria x ananassa HOM05D012224 ORTHO05D017959 2.3e-19 99.8 48 100.0
Dinv27603 Davidia involucrata HOM05D004471 ORTHO05D005345 1.1e-18 97.4 54 85.2
FAN02G2374 Fragaria x ananassa HOM05D012224 ORTHO05D017959 4.3e-18 95.5 50 94.0
Cfa024495 Carpinus fangiana HOM05D004471 ORTHO05D005345 2.1e-17 93.2 142 38.7
Dinv27604 Davidia involucrata HOM05D004471 ORTHO05D005345 8.2e-17 91.3 52 84.6
Pp3c13_13330 Physcomitrium patens HOM05D004471 ORTHO05D005345 4.1e-16 89.0 117 41.9
CBR_g12958 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-13 80.5 95 46.3
QL03p002537 Quercus lobata HOM05D004471 ORTHO05D005345 2.5e-13 79.7 63 60.3
RcHm_v2.0_Chr5g0055661 Rosa chinensis HOM05D004471 ORTHO05D005345 2.8e-09 66.2 35 85.7
FAN08G0416 Fragaria x ananassa HOM05D004471 ORTHO05D203975 1.5e-07 60.5 46 69.6


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