Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 2.4e-36 154.8 71 100.0
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.4e-36 154.8 71 100.0
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.4e-36 154.8 71 100.0
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.4e-36 154.8 71 100.0
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.4e-36 154.8 71 100.0
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 2.4e-36 154.8 71 100.0
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.7e-34 148.7 71 97.2
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.5e-33 144.8 86 82.6
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 9.5e-33 142.9 71 91.5
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.2e-32 142.5 71 91.5
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.7e-29 132.1 71 81.7
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.7e-29 132.1 71 83.1
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 2.2e-29 131.7 71 80.3
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 2.2e-29 131.7 71 83.1
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 2.9e-29 131.3 71 84.5
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 4.9e-29 130.6 71 80.3
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 6.4e-29 130.2 71 81.7
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 6.4e-29 130.2 71 81.7
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 6.4e-29 130.2 71 81.7
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 6.4e-29 130.2 67 88.1
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 8.3e-29 129.8 71 80.3
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 8.3e-29 129.8 71 78.9
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 8.3e-29 129.8 71 78.9
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 8.3e-29 129.8 71 80.3
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 1.1e-28 129.4 71 83.1
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 1.4e-28 129.0 71 80.3
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.4e-28 129.0 71 80.3
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.9e-28 128.6 71 80.3
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 2.4e-28 128.3 71 80.3
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 3.2e-28 127.9 71 80.3
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 3.2e-28 127.9 71 78.9
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 4.1e-28 127.5 71 76.1
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 7.0e-28 126.7 71 78.9
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 7.0e-28 126.7 71 78.9
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 7.0e-28 126.7 71 78.9
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 7.0e-28 126.7 71 76.1
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 7.0e-28 126.7 71 78.9
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 9.2e-28 126.3 71 77.5
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 9.2e-28 126.3 71 78.9
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 9.2e-28 126.3 71 78.9
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 9.2e-28 126.3 71 78.9
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 9.2e-28 126.3 71 80.3
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.2e-27 125.9 71 76.1
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.2e-27 125.9 71 78.9
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.2e-27 125.9 71 80.3
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.2e-27 125.9 71 77.5
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.6e-27 125.6 71 80.3
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.6e-27 125.6 71 80.3
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.6e-27 125.6 71 77.5
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 2.0e-27 125.2 71 78.9
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 2.0e-27 125.2 71 78.9
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 2.7e-27 124.8 71 74.6
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 2.7e-27 124.8 71 76.1
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 2.7e-27 124.8 71 77.5
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.7e-27 124.8 71 77.5
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 2.7e-27 124.8 71 76.1
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.5e-27 124.4 71 78.9
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 4.6e-27 124.0 71 77.5
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 4.6e-27 124.0 71 77.5
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 4.6e-27 124.0 71 76.1
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 6.0e-27 123.6 71 74.6
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 6.0e-27 123.6 71 77.5
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 6.0e-27 123.6 71 78.9
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 6.0e-27 123.6 71 76.1
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 7.8e-27 123.2 71 74.6
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.0e-26 122.9 71 78.9
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 2.3e-26 121.7 71 74.6
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 2.3e-26 121.7 71 77.5
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 5.0e-26 120.6 71 74.6
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 6.6e-26 120.2 71 73.2
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 8.6e-26 119.8 71 73.2
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.5e-25 119.0 71 73.2
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 3.3e-25 117.9 71 74.6
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.3e-25 117.9 66 77.3
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 3.3e-25 117.9 71 73.2
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 4.3e-25 117.5 71 76.1
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 5.6e-25 117.1 71 74.6
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 7.3e-25 116.7 71 71.8
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.6e-24 115.5 71 74.6
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 1.6e-24 115.5 65 78.5
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 2.1e-24 115.2 71 70.4
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 2.1e-24 115.2 71 70.4
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 2.8e-24 114.8 71 71.8
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 4.7e-24 114.0 71 70.4
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 6.2e-24 113.6 71 69.0
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.1e-23 112.8 71 69.0
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.8e-23 112.1 69 72.5
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 4.0e-23 110.9 71 67.6
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 8.9e-23 109.8 71 64.8
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 1.2e-22 109.4 71 67.6
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.5e-22 109.0 71 70.4
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 3.4e-22 107.8 66 72.7
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 5.8e-22 107.1 65 72.3
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 7.5e-22 106.7 71 63.4
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 4.9e-21 104.0 71 66.2
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 2.7e-19 98.2 66 65.2
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.3e-18 95.9 71 56.3
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 3.9e-18 94.4 63 57.1
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 5.6e-17 90.5 66 59.1
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 2.8e-16 88.2 67 53.7
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 2.6e-14 81.6 67 50.7
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 9.9e-14 79.7 65 49.2
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 7.1e-12 73.6 62 50.0
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.0e-10 69.7 40 72.5
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 5.8e-06 53.9 44 47.7


User provided reference genes

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