Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 2.0e-59 232.3 118 100.0
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.0e-59 232.3 118 100.0
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.0e-59 232.3 118 100.0
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 6.4e-58 227.3 118 97.5
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 6.4e-58 227.3 118 98.3
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.6e-53 212.6 118 93.2
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 1.5e-46 189.5 118 83.1
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.4e-44 183.0 120 84.2
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 5.1e-39 164.5 119 68.1
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 5.1e-39 164.5 119 73.9
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 5.1e-39 164.5 119 73.9
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 4.3e-38 161.4 120 74.2
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 7.3e-38 160.6 119 72.3
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 1.2e-37 159.8 123 69.9
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 2.8e-37 158.7 118 70.3
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 6.2e-37 157.5 119 71.4
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 6.8e-36 154.1 118 67.8
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 8.9e-36 153.7 125 68.8
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 1.2e-35 153.3 123 68.3
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 1.2e-35 153.3 123 68.3
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 1.2e-35 153.3 120 70.8
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.5e-35 152.9 120 70.0
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.5e-35 152.9 120 70.0
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 1.5e-35 152.9 126 66.7
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 2.0e-35 152.5 118 70.3
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 3.4e-35 151.8 110 72.7
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 4.4e-35 151.4 120 69.2
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 7.6e-35 150.6 121 67.8
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 9.9e-35 150.2 125 67.2
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 9.9e-35 150.2 94 77.7
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 1.3e-34 149.8 125 65.6
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.3e-34 149.8 120 68.3
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 1.7e-34 149.4 120 66.7
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 2.9e-34 148.7 122 64.8
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 4.9e-34 147.9 123 67.5
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 6.4e-34 147.5 121 66.9
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 6.4e-34 147.5 118 68.6
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 1.1e-33 146.7 121 66.1
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 1.9e-33 146.0 94 75.5
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 2.4e-33 145.6 119 66.4
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 3.2e-33 145.2 92 76.1
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 4.1e-33 144.8 114 67.5
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 5.4e-33 144.4 94 74.5
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 9.2e-33 143.7 79 87.3
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 1.6e-32 142.9 123 65.0
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 2.1e-32 142.5 124 66.9
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 3.5e-32 141.7 118 66.1
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 4.6e-32 141.4 119 63.9
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 4.6e-32 141.4 90 80.0
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 7.8e-32 140.6 121 65.3
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.0e-31 140.2 122 65.6
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.3e-31 139.8 122 64.8
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 1.7e-31 139.4 115 63.5
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 1.7e-31 139.4 119 63.0
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 2.3e-31 139.0 114 66.7
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 3.0e-31 138.7 123 59.3
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 3.0e-31 138.7 74 93.2
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 6.6e-31 137.5 82 80.5
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 6.6e-31 137.5 107 67.3
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 8.6e-31 137.1 108 67.6
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 8.6e-31 137.1 108 66.7
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 8.6e-31 137.1 120 61.7
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 1.1e-30 136.7 128 58.6
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 1.5e-30 136.3 119 62.2
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 1.9e-30 136.0 108 66.7
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.9e-30 136.0 120 62.5
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 1.9e-30 136.0 95 73.7
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 2.5e-30 135.6 97 71.1
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 5.6e-30 134.4 108 65.7
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 5.6e-30 134.4 125 61.6
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 5.6e-30 134.4 125 60.0
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 7.3e-30 134.0 121 64.5
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 9.6e-30 133.7 110 66.4
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 9.6e-30 133.7 110 66.4
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 3.6e-29 131.7 124 60.5
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 3.6e-29 131.7 73 86.3
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 8.1e-29 130.6 78 82.1
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 8.1e-29 130.6 70 88.6
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.1e-28 130.2 119 62.2
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 1.4e-28 129.8 110 65.5
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 4.0e-28 128.3 127 59.1
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 8.9e-28 127.1 69 85.5
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 8.9e-28 127.1 78 78.2
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 1.2e-27 126.7 67 88.1
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 2.0e-27 125.9 129 60.5
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 6.4e-26 120.9 122 59.0
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 2.4e-25 119.0 76 76.3
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 2.1e-24 115.9 121 55.4
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 2.7e-24 115.5 162 43.2
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 7.8e-24 114.0 72 77.8
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 2.5e-22 109.0 125 45.6
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 4.3e-22 108.2 70 70.0
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.2e-19 100.1 48 95.8
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 2.6e-19 99.0 49 91.8
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 1.3e-18 96.7 108 51.9
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 7.9e-16 87.4 70 58.6
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 1.5e-14 83.2 110 45.5
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 9.9e-11 70.5 90 44.4
MELO3C025961.2 Cucumis melo HOM05D007442 ORTHO05D009284 8.7e-07 57.4 77 51.9


User provided reference genes

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